CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, golgi

Predictor Summary:

extracellular 6
golgi 6
plasma membrane 6
endoplasmic reticulum 5
vacuole 5
plastid 2
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, golgi
Any Predictor:	nucleus, plastid, secretory
BaCelLo:	secretory
ChloroP:	plastid
EpiLoc:	nucleus
iPSORT:	secretory
MultiLoc:	golgi
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d032401_P001	Maize	extracellular	75.09	81.25
Os03t0564600-01	Rice	extracellular	60.65	68.29
TraesCS4D01G349300.1	Wheat	endoplasmic reticulum	57.4	67.09
TraesCS4B01G355900.1	Wheat	endoplasmic reticulum	56.68	66.24
TraesCS5A01G525100.1	Wheat	endoplasmic reticulum, extracellular	56.68	65.97
HORVU3Hr1G052170.1	Barley	cytosol	36.46	65.16
HORVU2Hr1G108130.1	Barley	cytosol	35.02	61.39
HORVU5Hr1G018110.1	Barley	cytosol	37.18	58.19
HORVU4Hr1G085990.1	Barley	extracellular, mitochondrion, plasma membrane	57.4	53.0
GSMUA_Achr4P23960_001	Banana	mitochondrion	32.85	47.64
KRH26839	Soybean	cytosol	28.52	39.11
PGSC0003DMT400034269	Potato	mitochondrion	14.08	35.78
KRH26837	Soybean	cytosol	22.38	35.63
VIT_12s0059g02580.t01	Wine grape	extracellular	30.32	34.85
KRH22515	Soybean	endoplasmic reticulum, extracellular	30.69	34.69
VIT_12s0059g02590.t01	Wine grape	extracellular	29.96	34.3
KRH22514	Soybean	endoplasmic reticulum, extracellular	29.96	34.02
KRH22513	Soybean	cytosol	20.22	33.94
VIT_12s0059g02620.t01	Wine grape	extracellular, plasma membrane	30.69	33.73
PGSC0003DMT400034271	Potato	endoplasmic reticulum, extracellular, vacuole	28.88	33.33
Solyc12g005720.1.1	Tomato	extracellular	28.52	32.92
AT3G22060.1	Thale cress	extracellular	29.24	32.14
CDY68211	Canola	endoplasmic reticulum, extracellular, vacuole	28.52	30.98
CDY52060	Canola	endoplasmic reticulum, extracellular, vacuole	28.52	30.98
CDY57408	Canola	endoplasmic reticulum, plasma membrane, vacuole	28.16	30.59
Bra031321.1-P	Field mustard	endoplasmic reticulum, plasma membrane, vacuole	28.16	30.59
EES18898	Sorghum	cytosol, peroxisome, plastid	24.91	22.85
EER92464	Sorghum	endoplasmic reticulum, extracellular	22.74	22.83
VIT_12s0059g02600.t01	Wine grape	extracellular	29.96	21.39

Protein Annotations

Gene3D:3.30.430.20	MapMan:35.1	EntrezGene:8065665	UniProt:C5WV83	EnsemblPlants:EER91340	ProteinID:EER91340
ProteinID:EER91340.1	InterPro:GNK2	InterPro:GNK2_sf	InterPro:IPR002902	InterPro:IPR038408	PFAM:PF01657
PFscan:PS51473	PANTHER:PTHR32099	PANTHER:PTHR32099:SF13	EnsemblPlantsGene:SORBI_3001G188800	SignalP:SignalP-noTM	UniParc:UPI0001A8236B
RefSeq:XP_002464342.1	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr1:+:16693614..16694447

Molecular Weight (calculated)

28408.7 Da

IEP (calculated)

7.847

GRAVY (calculated)

0.135

Length

277 amino acids

Sequence
(BLAST)

001: MVLHRAALFL LALVAAAAST WPSSSEAAGT WTWTTTSAPV ASCSGAGTFA ADSAFASNLR RLLSLLEAKA PAAGGFDIAT VGSGGAGQRV VHGLALCRGD
101: VARAACAACI RSAARTHAPR LCARKTDAVV WLDACTLRYS AGPDDDPFFG EVDWDHRAFL PDAVALRTPT AARSAELDRD VAGLLKRLTR TAYLSPLLFA
201: AGEDASAAGA GQGGGGGQQQ RLRAMAQCTK DLSGGDCKAC LDAAIAQLMA RGCAPEGGRV LGGSCSLRYE LSPFFDS

Best Arabidopsis Sequence Match ( AT3G22060.1 )
(BLAST)

001: MSSLKRIVWF PILAIAIQIL SIHTVLSQSQ NNAFLFHKCS DIEGSFTSKS LYESNLNNLF SQLSYKVPST GFAASSTGNT PNNVNGLALC RGDASSSDCR
101: SCLETAIPEL RQRCPNNKAG IVWYDNCLVK YSSTNFFGKI DFENRFYLYN VKNVSDPSTF NSQTKALLTE LTKKATTRDN QKLFATGEKN IGKNKLYGLV
201: QCTRDLKSIT CKACLNGIIG ELPNCCDGKE GGRVVGGSCN FRYEIYPFVK TA

Arabidopsis Description

CRRSP38Cysteine-rich repeat secretory protein 38 [Source:UniProtKB/Swiss-Prot;Acc:Q9LRJ9]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.