Factsheet for GSMUA_Achr4P23960_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 1
mitochondrion 5
plasma membrane 1
plastid 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400034269	Potato	mitochondrion	32.98	57.8
KRH26837	Soybean	cytosol	48.69	53.45
KRH26839	Soybean	cytosol	49.21	46.53
HORVU3Hr1G052170.1	Barley	cytosol	36.65	45.16
HORVU2Hr1G108130.1	Barley	cytosol	36.13	43.67
VIT_12s0059g02590.t01	Wine grape	extracellular	54.97	43.39
KRH22515	Soybean	endoplasmic reticulum, extracellular	53.4	41.63
KRH22514	Soybean	endoplasmic reticulum, extracellular	52.88	41.39
HORVU5Hr1G018110.1	Barley	cytosol	38.22	41.24
TraesCS5A01G525100.1	Wheat	endoplasmic reticulum, extracellular	51.31	41.18
TraesCS4D01G349300.1	Wheat	endoplasmic reticulum	50.79	40.93
Solyc12g005720.1.1	Tomato	extracellular	51.31	40.83
PGSC0003DMT400034271	Potato	endoplasmic reticulum, extracellular, vacuole	51.31	40.83
KRH22513	Soybean	cytosol	35.08	40.61
TraesCS4B01G355900.1	Wheat	endoplasmic reticulum	50.26	40.51
VIT_12s0059g02620.t01	Wine grape	extracellular, plasma membrane	53.4	40.48
AT3G22060.1	Thale cress	extracellular	52.36	39.68
VIT_12s0059g02580.t01	Wine grape	extracellular	49.21	39.0
Os03t0564600-01	Rice	extracellular	49.74	38.62
CDY68211	Canola	endoplasmic reticulum, extracellular, vacuole	50.26	37.65
CDY52060	Canola	endoplasmic reticulum, extracellular, vacuole	50.26	37.65
Bra031321.1-P	Field mustard	endoplasmic reticulum, plasma membrane, vacuole	49.74	37.25
CDY57408	Canola	endoplasmic reticulum, plasma membrane, vacuole	49.74	37.25
Zm00001d032401_P001	Maize	extracellular	46.6	34.77
HORVU4Hr1G085990.1	Barley	extracellular, mitochondrion, plasma membrane	51.83	33.0
EER91340	Sorghum	extracellular, golgi	47.64	32.85
GSMUA_Achr10P...	Banana	extracellular	36.65	27.34
VIT_12s0059g02600.t01	Wine grape	extracellular	53.4	26.29
GSMUA_Achr10P...	Banana	extracellular	34.55	25.68
GSMUA_Achr10P...	Banana	extracellular	34.03	25.29

Protein Annotations

Gene3D:3.30.430.20	MapMan:35.1	InterPro:GNK2	InterPro:GNK2_sf	GO:GO:0005575	GO:GO:0005618
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005773	GO:GO:0008150	GO:GO:0009719
GO:GO:0009737	GO:GO:0030312	EnsemblPlantsGene:GSMUA_Achr4G23960_001	EnsemblPlants:GSMUA_Achr4P23960_001	EnsemblPlants:GSMUA_Achr4T23960_001	InterPro:IPR002902
InterPro:IPR038408	UniProt:M0SRK7	PFAM:PF01657	PFscan:PS51473	PANTHER:PTHR32411	UniParc:UPI0002961602

Description

Putative Cysteine-rich repeat secretory protein 38 [Source:GMGC_GENE;Acc:GSMUA_Achr4G23960_001]

Coordinates

chr4:+:23950319..23950894

Molecular Weight (calculated)

21040.3 Da

IEP (calculated)

5.065

GRAVY (calculated)

-0.108

Length

191 amino acids

Sequence
(BLAST)

001: MFMLATKASP IGFALGSVGQ GGARANGLAL CRGDIKSTAC TTCVRTAGAR VRDLCPNNKD GIIWFDECML RYSDVEFFGE IDFDHRFYMW NRENVSDAVM
101: FDGKVENLMN RLKQKAYISP LLFATGEMEI GESQELYGLV QCTKDLSGGD CKKCLEAVIG ELPSCCDGKR GGRVVGGSCN IRYELYPFFD A

Best Arabidopsis Sequence Match ( AT3G22060.1 )
(BLAST)

001: MSSLKRIVWF PILAIAIQIL SIHTVLSQSQ NNAFLFHKCS DIEGSFTSKS LYESNLNNLF SQLSYKVPST GFAASSTGNT PNNVNGLALC RGDASSSDCR
101: SCLETAIPEL RQRCPNNKAG IVWYDNCLVK YSSTNFFGKI DFENRFYLYN VKNVSDPSTF NSQTKALLTE LTKKATTRDN QKLFATGEKN IGKNKLYGLV
201: QCTRDLKSIT CKACLNGIIG ELPNCCDGKE GGRVVGGSCN FRYEIYPFVK TA

Arabidopsis Description

CRRSP38Cysteine-rich repeat secretory protein 38 [Source:UniProtKB/Swiss-Prot;Acc:Q9LRJ9]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.