Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 6
- vacuole 4
- plasma membrane 4
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4D01G349300.1 | Wheat | endoplasmic reticulum | 97.89 | 97.89 |
| TraesCS5A01G525100.1 | Wheat | endoplasmic reticulum, extracellular | 95.36 | 94.96 |
| HORVU3Hr1G052170.1 | Barley | cytosol | 55.27 | 84.52 |
| HORVU2Hr1G108130.1 | Barley | cytosol | 55.7 | 83.54 |
| HORVU5Hr1G018110.1 | Barley | cytosol | 57.38 | 76.84 |
| HORVU4Hr1G085990.1 | Barley | extracellular, mitochondrion, plasma membrane | 91.14 | 72.0 |
| Os03t0564600-01 | Rice | extracellular | 71.31 | 68.7 |
| Zm00001d032401_P001 | Maize | extracellular | 63.29 | 58.59 |
| EER91340 | Sorghum | extracellular, golgi | 66.24 | 56.68 |
| GSMUA_Achr4P23960_001 | Banana | mitochondrion | 40.51 | 50.26 |
| KRH26839 | Soybean | cytosol | 35.02 | 41.09 |
| KRH22513 | Soybean | cytosol | 25.74 | 36.97 |
| KRH26837 | Soybean | cytosol | 25.32 | 34.48 |
| PGSC0003DMT400034269 | Potato | mitochondrion | 15.19 | 33.03 |
| VIT_12s0059g02580.t01 | Wine grape | extracellular | 33.33 | 32.78 |
| KRH22515 | Soybean | endoplasmic reticulum, extracellular | 33.76 | 32.65 |
| VIT_12s0059g02590.t01 | Wine grape | extracellular | 33.33 | 32.64 |
| VIT_12s0059g02620.t01 | Wine grape | extracellular, plasma membrane | 34.6 | 32.54 |
| KRH22514 | Soybean | endoplasmic reticulum, extracellular | 33.33 | 32.38 |
| AT3G22060.1 | Thale cress | extracellular | 34.18 | 32.14 |
| PGSC0003DMT400034271 | Potato | endoplasmic reticulum, extracellular, vacuole | 30.8 | 30.42 |
| CDY52060 | Canola | endoplasmic reticulum, extracellular, vacuole | 32.49 | 30.2 |
| Bra031321.1-P | Field mustard | endoplasmic reticulum, plasma membrane, vacuole | 32.49 | 30.2 |
| CDY57408 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 32.49 | 30.2 |
| CDY68211 | Canola | endoplasmic reticulum, extracellular, vacuole | 32.49 | 30.2 |
| Solyc12g005720.1.1 | Tomato | extracellular | 29.96 | 29.58 |
| TraesCS1B01G045300.1 | Wheat | endoplasmic reticulum, extracellular | 27.85 | 24.26 |
| TraesCS3B01G024400.1 | Wheat | extracellular | 27.85 | 23.49 |
| TraesCS4B01G205300.1 | Wheat | extracellular | 24.47 | 22.14 |
| VIT_12s0059g02600.t01 | Wine grape | extracellular | 33.76 | 20.62 |
| TraesCS2B01G242200.1 | Wheat | endoplasmic reticulum, plasma membrane | 23.63 | 18.36 |
| TraesCS2B01G242400.1 | Wheat | plastid | 24.47 | 15.43 |
Protein Annotations
| Gene3D:3.30.430.20 | MapMan:35.1 | InterPro:GNK2 | InterPro:GNK2_sf | GO:GO:0005575 | GO:GO:0005618 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005773 | GO:GO:0008150 | GO:GO:0009719 |
| GO:GO:0009737 | GO:GO:0030312 | InterPro:IPR002902 | InterPro:IPR038408 | PFAM:PF01657 | PFscan:PS51473 |
| PANTHER:PTHR32099 | PANTHER:PTHR32099:SF13 | SignalP:SignalP-noTM | EnsemblPlantsGene:TraesCS4B01G355900 | EnsemblPlants:TraesCS4B01G355900.1 | SEG:seg |
Description
No Description!
Coordinates
chr4B:-:646818346..646819059
Molecular Weight (calculated)
24413.5 Da
IEP (calculated)
7.589
GRAVY (calculated)
0.345
Length
237 amino acids
Sequence
(BLAST)
(BLAST)
001: MAILEATLVL LLLLVAPAAG SDDALAASCS GARSFAADSP FASSLRQLFS LLETKARAIG FDIGSSGGVH GLALCRGDVA RATCAECIRS AGAQARRLCS
101: SKKDAVVWLD ACMLRYSDGH FFGEVDAGHS AVVPGGVLGA ARSAEFDNEV AGMMKRLTRT AYLSPLLFAA GAAEAVAGTR RLHGLAQCTK DLSGGDCKLC
201: LEAAISKLLA RGCAKEGGMV LGGSCSLRYD LYPIFDS
101: SKKDAVVWLD ACMLRYSDGH FFGEVDAGHS AVVPGGVLGA ARSAEFDNEV AGMMKRLTRT AYLSPLLFAA GAAEAVAGTR RLHGLAQCTK DLSGGDCKLC
201: LEAAISKLLA RGCAKEGGMV LGGSCSLRYD LYPIFDS
001: MSSLKRIVWF PILAIAIQIL SIHTVLSQSQ NNAFLFHKCS DIEGSFTSKS LYESNLNNLF SQLSYKVPST GFAASSTGNT PNNVNGLALC RGDASSSDCR
101: SCLETAIPEL RQRCPNNKAG IVWYDNCLVK YSSTNFFGKI DFENRFYLYN VKNVSDPSTF NSQTKALLTE LTKKATTRDN QKLFATGEKN IGKNKLYGLV
201: QCTRDLKSIT CKACLNGIIG ELPNCCDGKE GGRVVGGSCN FRYEIYPFVK TA
101: SCLETAIPEL RQRCPNNKAG IVWYDNCLVK YSSTNFFGKI DFENRFYLYN VKNVSDPSTF NSQTKALLTE LTKKATTRDN QKLFATGEKN IGKNKLYGLV
201: QCTRDLKSIT CKACLNGIIG ELPNCCDGKE GGRVVGGSCN FRYEIYPFVK TA
Arabidopsis Description
CRRSP38Cysteine-rich repeat secretory protein 38 [Source:UniProtKB/Swiss-Prot;Acc:Q9LRJ9]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.