Factsheet for TraesCS1B01G045300.1

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, extracellular

Predictor Summary:

extracellular 5
endoplasmic reticulum 5
vacuole 4
plasma membrane 4
golgi 4
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, extracellular
Any Predictor:	plastid, secretory
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1A01G035600.1	Wheat	endoplasmic reticulum, plasma membrane	97.06	97.06
TraesCS1D01G037000.1	Wheat	endoplasmic reticulum, vacuole	93.38	92.36
TraesCS1D01G036900.1	Wheat	plastid	96.32	87.63
Zm00001d035646_P001	Maize	endoplasmic reticulum, extracellular	64.34	64.58
Os05t0112800-01	Rice	extracellular	62.87	62.87
EES18898	Sorghum	cytosol, peroxisome, plastid	61.03	54.97
GSMUA_Achr10P...	Banana	extracellular	40.81	43.36
GSMUA_Achr10P...	Banana	extracellular	39.34	41.63
GSMUA_Achr10P...	Banana	extracellular	38.97	41.25
Bra037480.1-P	Field mustard	extracellular	38.6	40.23
CDX86299	Canola	extracellular	38.6	40.23
TraesCS4B01G205300.1	Wheat	extracellular	38.6	40.08
CDX85345	Canola	plasma membrane	38.24	39.85
AT5G48540.1	Thale cress	extracellular	38.24	39.54
VIT_07s0141g00930.t01	Wine grape	extracellular	37.13	38.55
VIT_07s0141g00870.t01	Wine grape	cytosol	20.22	36.42
Solyc09g057960.1.1	Tomato	extracellular, nucleus	34.56	36.02
KRG99540	Soybean	extracellular	33.82	35.8
PGSC0003DMT400091649	Potato	extracellular	33.82	34.72
VIT_07s0141g00840.t01	Wine grape	extracellular	34.56	34.56
TraesCS4B01G355900.1	Wheat	endoplasmic reticulum	24.26	27.85
TraesCS2B01G242200.1	Wheat	endoplasmic reticulum, plasma membrane	27.57	24.59
TraesCS3B01G024400.1	Wheat	extracellular	23.53	22.78
TraesCS2B01G242400.1	Wheat	plastid	24.26	17.55

Protein Annotations

EnsemblPlants:TraesCS1B01G045300.1	EnsemblPlantsGene:TraesCS1B01G045300	Gene3D:3.30.430.20	InterPro:GNK2	InterPro:GNK2_sf	InterPro:IPR002902
InterPro:IPR038408	PANTHER:PTHR32411	PANTHER:PTHR32411:SF44	PFAM:PF01657	PFscan:PS51473	SEG:seg
SignalP:SignalP-noTM	MapMan:35.1	:	:	:	:

Description

No Description!

Coordinates

chr1B:-:25112853..25113974

Molecular Weight (calculated)

28657.1 Da

IEP (calculated)

6.330

GRAVY (calculated)

0.104

Length

272 amino acids

Sequence
(BLAST)

001: MASSSSSPLL MLLLLPLLLA MARPCYSVDA IGTYCAKNGT SAETQASIDQ VLAALVPRAS AAYYATATAG RSSSAVWGLA QCRGDVPRQD CSLCLAAAAK
101: EVASSCRGSS DGRVFYDYCL LRYSTSNFVG LADTGYTLIL LNTQNATGVD LTAFDRAQGK LMSRVASEAG GAQNKGLATD TTRLGGDGGG AKTTIYGLGW
201: CTRDITAADC GLCVAQAVAE LPNYCRYRRG CRVIYSSCMA RYEVYPFFFP LDGAGESADE VAQCDKIVLN YP

Best Arabidopsis Sequence Match ( AT5G48540.1 )
(BLAST)

001: MKTLVVKCFL LLALVCSCRA ADSIWQLCNT NSNISASSQV SKNIDSLLAT LVSKTPSKGF KTTTSSSYNN KEKVYGLAQC RGDISNTDCS TCIQDAAKKI
101: REVCQNQSDS RILYDFCFLR YSQENFIGKL DTGAGLIYFN VANVTEIDPK KFDNELGALF DKIRSEAVLP KNKGLGKGKT KLTPFVTLNG LVQCTRDLSE
201: LDCAQCFATA VGSFMTTCHN KKGCRVLYSS CYVRYEFYPF YFPLDPAKTG PSVGRISSVH LSP

Arabidopsis Description

CRRSP55Cysteine-rich repeat secretory protein 55 [Source:UniProtKB/Swiss-Prot;Acc:Q9LV60]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.