Factsheet for TraesCS4B01G205300.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 7
golgi 4
plasma membrane 4
endoplasmic reticulum 4
vacuole 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4D01G206200.1	Wheat	extracellular	97.71	94.81
TraesCS4A01G099000.1	Wheat	extracellular	96.18	93.33
HORVU4Hr1G059150.3	Barley	extracellular	93.13	92.42
Zm00001d028651_P001	Maize	extracellular	76.34	74.63
EER92464	Sorghum	endoplasmic reticulum, extracellular	77.1	73.19
Os03t0277600-01	Rice	extracellular	70.61	69.81
Os03t0277700-01	Rice	extracellular	66.79	66.04
GSMUA_Achr10P...	Banana	extracellular	58.02	59.14
GSMUA_Achr10P...	Banana	extracellular	57.25	58.37
Os08t0136700-01	Rice	extracellular	59.92	57.3
Os08t0136300-01	Rice	extracellular	59.16	56.36
Os08t0136800-01	Rice	extracellular	58.78	55.8
GSMUA_Achr10P...	Banana	extracellular	51.91	53.12
Os08t0136500-01	Rice	endoplasmic reticulum, vacuole	55.73	52.14
Os03t0312300-01	Rice	golgi	36.64	51.89
CDX85345	Canola	plasma membrane	44.27	44.44
Bra037480.1-P	Field mustard	extracellular	43.89	44.06
CDX86299	Canola	extracellular	43.89	44.06
AT5G48540.1	Thale cress	extracellular	43.51	43.35
KRG99540	Soybean	extracellular	42.37	43.19
VIT_07s0141g00930.t01	Wine grape	extracellular	41.6	41.6
Solyc09g057960.1.1	Tomato	extracellular, nucleus	39.31	39.46
TraesCS1B01G045300.1	Wheat	endoplasmic reticulum, extracellular	40.08	38.6
PGSC0003DMT400091649	Potato	extracellular	38.93	38.49
VIT_07s0141g00840.t01	Wine grape	extracellular	39.31	37.87
VIT_07s0141g00870.t01	Wine grape	cytosol	21.76	37.75
TraesCS4B01G355900.1	Wheat	endoplasmic reticulum	22.14	24.47
TraesCS3B01G024400.1	Wheat	extracellular	25.19	23.49
TraesCS2B01G242200.1	Wheat	endoplasmic reticulum, plasma membrane	26.34	22.62
TraesCS2B01G242400.1	Wheat	plastid	25.19	17.55

Protein Annotations

EnsemblPlants:TraesCS4B01G205300.1	EnsemblPlantsGene:TraesCS4B01G205300	Gene3D:3.30.430.20	InterPro:GNK2	InterPro:GNK2_sf	InterPro:IPR002902
InterPro:IPR038408	PANTHER:PTHR32411	PANTHER:PTHR32411:SF43	PFAM:PF01657	PFscan:PS51473	SEG:seg
SignalP:SignalP-noTM	MapMan:35.1	:	:	:	:

Description

No Description!

Coordinates

chr4B:+:437404090..437404878

Molecular Weight (calculated)

27399.7 Da

IEP (calculated)

8.226

GRAVY (calculated)

0.059

Length

262 amino acids

Sequence
(BLAST)

001: MALCRARSGL LLVAMALLPL GMAMDAIGSN CAGTRYAGSG KANIDSVLAD LVAKGSSGGF ATAVAGKGNS TVVYGLAQCR GDVSASDCSA CLADAAKQLP
101: AACSYQSDGR IWYDFCFMRY DNTDFAGQSD TGAGVILVNV QAADDPKPFK KAMGKVMNKA TAQASASGRA GLGRSKDQYT PFVTIYGLAQ CTRDLAPLAC
201: AQCVSVALSK FGDYCGAQQG CQINYSSCRV RYEIYPFYFP LDGADGRATT DMTKYTKIVV HA

Best Arabidopsis Sequence Match ( AT5G48540.1 )
(BLAST)

001: MKTLVVKCFL LLALVCSCRA ADSIWQLCNT NSNISASSQV SKNIDSLLAT LVSKTPSKGF KTTTSSSYNN KEKVYGLAQC RGDISNTDCS TCIQDAAKKI
101: REVCQNQSDS RILYDFCFLR YSQENFIGKL DTGAGLIYFN VANVTEIDPK KFDNELGALF DKIRSEAVLP KNKGLGKGKT KLTPFVTLNG LVQCTRDLSE
201: LDCAQCFATA VGSFMTTCHN KKGCRVLYSS CYVRYEFYPF YFPLDPAKTG PSVGRISSVH LSP

Arabidopsis Description

CRRSP55Cysteine-rich repeat secretory protein 55 [Source:UniProtKB/Swiss-Prot;Acc:Q9LV60]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.