Factsheet for TraesCS4A01G099000.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 6
endoplasmic reticulum 4
vacuole 4
plasma membrane 4
golgi 4
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	plastid, secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4B01G205300.1	Wheat	extracellular	93.33	96.18
TraesCS4D01G206200.1	Wheat	extracellular	95.93	95.93
HORVU4Hr1G059150.3	Barley	extracellular	89.26	91.29
Zm00001d028651_P001	Maize	extracellular	74.81	75.37
EER92464	Sorghum	endoplasmic reticulum, extracellular	75.56	73.91
Os03t0277600-01	Rice	extracellular	67.78	69.06
Os03t0277700-01	Rice	extracellular	64.07	65.28
GSMUA_Achr10P...	Banana	extracellular	55.93	58.75
GSMUA_Achr10P...	Banana	extracellular	55.19	57.98
Os08t0136700-01	Rice	extracellular	57.41	56.57
Os08t0136300-01	Rice	extracellular	56.67	55.64
Os08t0136800-01	Rice	extracellular	56.3	55.07
GSMUA_Achr10P...	Banana	extracellular	51.11	53.91
Os08t0136500-01	Rice	endoplasmic reticulum, vacuole	54.81	52.86
Os03t0312300-01	Rice	golgi	34.81	50.81
CDX85345	Canola	plasma membrane	43.33	44.83
CDX86299	Canola	extracellular	42.96	44.44
Bra037480.1-P	Field mustard	extracellular	42.96	44.44
AT5G48540.1	Thale cress	extracellular	42.22	43.35
KRG99540	Soybean	extracellular	40.37	42.41
VIT_07s0141g00930.t01	Wine grape	extracellular	41.11	42.37
Solyc09g057960.1.1	Tomato	extracellular, nucleus	38.89	40.23
PGSC0003DMT400091649	Potato	extracellular	38.89	39.62
VIT_07s0141g00840.t01	Wine grape	extracellular	39.63	39.34
TraesCS1A01G035600.1	Wheat	endoplasmic reticulum, plasma membrane	39.26	38.97
VIT_07s0141g00870.t01	Wine grape	cytosol	20.74	37.09
TraesCS5A01G525100.1	Wheat	endoplasmic reticulum, extracellular	21.85	24.79
TraesCS2A01G216800.1	Wheat	endoplasmic reticulum, vacuole	26.3	21.58
TraesCS3A01G494000.1	Wheat	plasma membrane	24.81	13.09

Protein Annotations

EnsemblPlants:TraesCS4A01G099000.1	EnsemblPlantsGene:TraesCS4A01G099000	Gene3D:3.30.430.20	InterPro:GNK2	InterPro:GNK2_sf	InterPro:IPR002902
InterPro:IPR038408	PANTHER:PTHR32411	PANTHER:PTHR32411:SF43	PFAM:PF01657	PFscan:PS51473	SEG:seg
SignalP:SignalP-noTM	MapMan:35.1	:	:	:	:

Description

No Description!

Coordinates

chr4A:-:111053700..111054617

Molecular Weight (calculated)

28132.6 Da

IEP (calculated)

8.226

GRAVY (calculated)

0.118

Length

270 amino acids

Sequence
(BLAST)

001: MASSIASTMA LCRARSGLLL LGMALLPLGM AMDAIGSNCA GTRYAGSGKA NIDSVLADLV AKGSSGGFAT AVAGKGNSTV VYGLAQCRGD VSASDCSSCL
101: ADAAKQLPTA CSYLSDARIW YDFCFMRYDD TDFAGQSDTG AGVILVNVQA ADDPKPFKKA VGKVMNKATA QASASGRAGL GRSKDQYTPF VTIYGLAQCT
201: RDLAPLVCAQ CVSVALSKFG DYCGAQQGCQ INYSSCRVRY EIYPFYFPLD GAGGRATTDM TKYTKIVVHA

Best Arabidopsis Sequence Match ( AT5G48540.1 )
(BLAST)

001: MKTLVVKCFL LLALVCSCRA ADSIWQLCNT NSNISASSQV SKNIDSLLAT LVSKTPSKGF KTTTSSSYNN KEKVYGLAQC RGDISNTDCS TCIQDAAKKI
101: REVCQNQSDS RILYDFCFLR YSQENFIGKL DTGAGLIYFN VANVTEIDPK KFDNELGALF DKIRSEAVLP KNKGLGKGKT KLTPFVTLNG LVQCTRDLSE
201: LDCAQCFATA VGSFMTTCHN KKGCRVLYSS CYVRYEFYPF YFPLDPAKTG PSVGRISSVH LSP

Arabidopsis Description

CRRSP55Cysteine-rich repeat secretory protein 55 [Source:UniProtKB/Swiss-Prot;Acc:Q9LV60]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.