CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 8
endoplasmic reticulum 5
vacuole 5
plasma membrane 5
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

plasma membrane: 26746009

msms PMID: 26746009 doi

S Chen, Y Luo, G Ding, F Xu

National Key Laboratory of Crop Genetic Improvement, and Microelement Research Center, Huazhong Agricultural University, Wuhan 430070, China., National Key Laboratory of Crop Genetic Improvement, and Microelement Research Center, Huazhong Agricultural University, Wuhan 430070, China. Electronic address: fangsenxu@mail.hzau.edu.cn., National Key Laboratory of Crop Genetic Improvement, and Microelement Research Center, Huazhong Agricultural University, Wuhan 430070, China; Key Laboratory of Agricultural Biotechnology of Liaoning Province, College of Biological Science and Technology, Shenyang Agricultural University, Shenyang 110866, China.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra037480.1-P	Field mustard	extracellular	99.23	99.23
CDX86299	Canola	extracellular	99.23	99.23
AT5G48540.1	Thale cress	extracellular	86.59	85.93
VIT_07s0141g00930.t01	Wine grape	extracellular	54.41	54.2
KRG99540	Soybean	extracellular	53.26	54.09
VIT_07s0141g00870.t01	Wine grape	cytosol	30.65	52.98
VIT_07s0141g00840.t01	Wine grape	extracellular	52.49	50.37
GSMUA_Achr10P...	Banana	extracellular	48.28	49.03
GSMUA_Achr10P...	Banana	extracellular	47.51	48.25
GSMUA_Achr10P...	Banana	extracellular	46.74	47.66
Solyc09g057960.1.1	Tomato	extracellular, nucleus	45.98	45.98
PGSC0003DMT400091649	Potato	extracellular	45.59	44.91
TraesCS4B01G205300.1	Wheat	extracellular	44.44	44.27
HORVU4Hr1G059150.3	Barley	extracellular	44.06	43.56
TraesCS4A01G099000.1	Wheat	extracellular	44.83	43.33
TraesCS4D01G206200.1	Wheat	extracellular	44.44	42.96
Zm00001d028651_P001	Maize	extracellular	43.68	42.54
Os03t0277600-01	Rice	extracellular	42.53	41.89
EER92464	Sorghum	endoplasmic reticulum, extracellular	43.3	40.94
Os03t0277700-01	Rice	extracellular	41.0	40.38
TraesCS1A01G035600.1	Wheat	endoplasmic reticulum, plasma membrane	41.76	40.07
TraesCS1B01G045300.1	Wheat	endoplasmic reticulum, extracellular	39.85	38.24
TraesCS1D01G037000.1	Wheat	endoplasmic reticulum, vacuole	40.23	38.18
Os08t0136300-01	Rice	extracellular	37.93	36.0
Os08t0136700-01	Rice	extracellular	37.55	35.77
TraesCS1D01G036900.1	Wheat	plastid	40.61	35.45
Zm00001d035646_P001	Maize	endoplasmic reticulum, extracellular	36.78	35.42
Os08t0136800-01	Rice	extracellular	37.16	35.14
Os05t0112800-01	Rice	extracellular	36.02	34.56
Os08t0136500-01	Rice	endoplasmic reticulum, vacuole	36.78	34.29
EES18898	Sorghum	cytosol, peroxisome, plastid	39.08	33.77
Os03t0312300-01	Rice	golgi	23.75	33.51
CDY52060	Canola	endoplasmic reticulum, extracellular, vacuole	30.65	31.37
CDY68211	Canola	endoplasmic reticulum, extracellular, vacuole	30.65	31.37
CDY57408	Canola	endoplasmic reticulum, plasma membrane, vacuole	30.27	30.98
CDY01121	Canola	extracellular	27.59	28.57
CDY47325	Canola	endoplasmic reticulum, extracellular, vacuole	27.2	28.06
CDY41770	Canola	endoplasmic reticulum, vacuole	27.2	27.31
CDY12405	Canola	plasma membrane	27.59	24.57
CDY10852	Canola	plasma membrane	29.12	20.0
CDY41240	Canola	extracellular, plasma membrane	25.29	17.37
CDY15079	Canola	cytosol, plasma membrane, plastid	21.46	16.52
CDY39159	Canola	plasma membrane	26.44	11.46
CDY10860	Canola	endoplasmic reticulum, plasma membrane	12.26	11.31

Protein Annotations

EnsemblPlants:CDX85345	EnsemblPlantsGene:GSBRNA2T00143017001	Gene3D:3.30.430.20	InterPro:GNK2	InterPro:GNK2_sf	InterPro:IPR002902
InterPro:IPR038408	PANTHER:PTHR32411	PANTHER:PTHR32411:SF49	PFAM:PF01657	PFscan:PS51257	PFscan:PS51473
ProteinID:CDX85345	ProteinID:CDX85345.1	SEG:seg	SignalP:SignalP-noTM	UniParc:UPI0004EB4B26	MapMan:35.1

Description

BnaC07g26560D

Coordinates

chrLK031841:-:1332270..1333055

Molecular Weight (calculated)

28640.2 Da

IEP (calculated)

8.262

GRAVY (calculated)

-0.087

Length

261 amino acids

Sequence
(BLAST)

001: MKTFIARCLL LLALVCSCSA ADSIWDLCNK NSNVSSSSQI SKNIDSILAT LVSKTPSQGF VTTTSSSYNK KDNVYGLAQC RGDISKTDCT TCIQDAAKKI
101: REVCPNQSDA RILYDFCFLR YSQENFIGKL DTGAGLIYYN VANVTETDPK TFDNELGKLF DKIRSEAVLP ESQGLGKGKT KLTPFVTLNG LVQCTRDLSA
201: LDCAQCFATA VQSFMGACHN KKGCRVLYSS CYVRYEFYPF YFPLDPAKTG TSVGTISSVR L

Best Arabidopsis Sequence Match ( AT5G48540.1 )
(BLAST)

001: MKTLVVKCFL LLALVCSCRA ADSIWQLCNT NSNISASSQV SKNIDSLLAT LVSKTPSKGF KTTTSSSYNN KEKVYGLAQC RGDISNTDCS TCIQDAAKKI
101: REVCQNQSDS RILYDFCFLR YSQENFIGKL DTGAGLIYFN VANVTEIDPK KFDNELGALF DKIRSEAVLP KNKGLGKGKT KLTPFVTLNG LVQCTRDLSE
201: LDCAQCFATA VGSFMTTCHN KKGCRVLYSS CYVRYEFYPF YFPLDPAKTG PSVGRISSVH LSP

Arabidopsis Description

CRRSP55Cysteine-rich repeat secretory protein 55 [Source:UniProtKB/Swiss-Prot;Acc:Q9LV60]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.