Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, vacuole
Predictor Summary:
Predictor Summary:
- plastid 2
- extracellular 4
- endoplasmic reticulum 5
- vacuole 5
- plasma membrane 4
- golgi 4
Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
TraesCS1A01G035600.1 | Wheat | endoplasmic reticulum, plasma membrane | 92.73 | 93.75 |
TraesCS1B01G045300.1 | Wheat | endoplasmic reticulum, extracellular | 92.36 | 93.38 |
TraesCS1D01G036900.1 | Wheat | plastid | 94.55 | 86.96 |
Zm00001d035646_P001 | Maize | endoplasmic reticulum, extracellular | 64.36 | 65.31 |
Os05t0112800-01 | Rice | extracellular | 61.82 | 62.5 |
EES18898 | Sorghum | cytosol, peroxisome, plastid | 62.18 | 56.62 |
GSMUA_Achr10P... | Banana | extracellular | 40.36 | 43.36 |
GSMUA_Achr10P... | Banana | extracellular | 38.55 | 41.25 |
GSMUA_Achr10P... | Banana | extracellular | 38.18 | 40.86 |
Bra037480.1-P | Field mustard | extracellular | 38.55 | 40.61 |
CDX86299 | Canola | extracellular | 38.55 | 40.61 |
CDX85345 | Canola | plasma membrane | 38.18 | 40.23 |
AT5G48540.1 | Thale cress | extracellular | 37.82 | 39.54 |
TraesCS4D01G206200.1 | Wheat | extracellular | 37.09 | 37.78 |
VIT_07s0141g00870.t01 | Wine grape | cytosol | 20.73 | 37.75 |
VIT_07s0141g00930.t01 | Wine grape | extracellular | 35.64 | 37.4 |
KRG99540 | Soybean | extracellular | 32.73 | 35.02 |
Solyc09g057960.1.1 | Tomato | extracellular, nucleus | 33.09 | 34.87 |
PGSC0003DMT400091649 | Potato | extracellular | 33.09 | 34.34 |
VIT_07s0141g00840.t01 | Wine grape | extracellular | 33.45 | 33.82 |
TraesCS4D01G349300.1 | Wheat | endoplasmic reticulum | 23.64 | 27.43 |
TraesCS2D01G222200.1 | Wheat | endoplasmic reticulum, plasma membrane | 24.36 | 22.48 |
TraesCS3D01G025300.1 | Wheat | extracellular, plasma membrane | 22.55 | 22.22 |
TraesCS1D01G431100.1 | Wheat | extracellular | 22.55 | 19.94 |
TraesCS2D01G222500.1 | Wheat | vacuole | 22.55 | 15.09 |
TraesCS3D01G501300.3 | Wheat | plasma membrane | 22.18 | 15.02 |
TraesCS3D01G501200.1 | Wheat | plasma membrane | 21.82 | 8.62 |
Protein Annotations
EnsemblPlants:TraesCS1D01G037000.1 | EnsemblPlantsGene:TraesCS1D01G037000 | Gene3D:3.30.430.20 | InterPro:GNK2 | InterPro:GNK2_sf | InterPro:IPR002902 |
InterPro:IPR038408 | PANTHER:PTHR32411 | PANTHER:PTHR32411:SF44 | PFAM:PF01657 | PFscan:PS51473 | SEG:seg |
SignalP:SignalP-noTM | MapMan:35.1 | : | : | : | : |
Description
No Description!
Coordinates
chr1D:+:17248136..17248963
Molecular Weight (calculated)
28835.4 Da
IEP (calculated)
7.889
GRAVY (calculated)
0.111
Length
275 amino acids
Sequence
(BLAST)
(BLAST)
001: MQQAMASSSS SPLLMLLLVP LLLAMARPCS GVDAISTYCA KNGTSAQTQA SIDQVLTALV PRASAAYYAT ATAGRSSSAV WGLAQCRGDV PRQDCSLCLA
101: AAAKEVASSC RGSSDGRVFY DYCLLRYSSS NFIGLADTGY TLILLNTQNA TGVDLAAFDR AQGKLMSRVA SEAGDTANKG LATDTTRLGG GGGGAKTTIY
201: GLGWCTRDIT AADCGLCVAQ AVAELPNYCR YRRGCRVIYS SCMARYEVYP FFFPLGGARE SADEVGQCDK IVLNA
101: AAAKEVASSC RGSSDGRVFY DYCLLRYSSS NFIGLADTGY TLILLNTQNA TGVDLAAFDR AQGKLMSRVA SEAGDTANKG LATDTTRLGG GGGGAKTTIY
201: GLGWCTRDIT AADCGLCVAQ AVAELPNYCR YRRGCRVIYS SCMARYEVYP FFFPLGGARE SADEVGQCDK IVLNA
001: MKTLVVKCFL LLALVCSCRA ADSIWQLCNT NSNISASSQV SKNIDSLLAT LVSKTPSKGF KTTTSSSYNN KEKVYGLAQC RGDISNTDCS TCIQDAAKKI
101: REVCQNQSDS RILYDFCFLR YSQENFIGKL DTGAGLIYFN VANVTEIDPK KFDNELGALF DKIRSEAVLP KNKGLGKGKT KLTPFVTLNG LVQCTRDLSE
201: LDCAQCFATA VGSFMTTCHN KKGCRVLYSS CYVRYEFYPF YFPLDPAKTG PSVGRISSVH LSP
101: REVCQNQSDS RILYDFCFLR YSQENFIGKL DTGAGLIYFN VANVTEIDPK KFDNELGALF DKIRSEAVLP KNKGLGKGKT KLTPFVTLNG LVQCTRDLSE
201: LDCAQCFATA VGSFMTTCHN KKGCRVLYSS CYVRYEFYPF YFPLDPAKTG PSVGRISSVH LSP
Arabidopsis Description
CRRSP55Cysteine-rich repeat secretory protein 55 [Source:UniProtKB/Swiss-Prot;Acc:Q9LV60]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.