Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 7
- endoplasmic reticulum 5
- vacuole 5
- plasma membrane 7
- golgi 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_07s0141g00870.t01 | Wine grape | cytosol | 45.42 | 78.81 |
| VIT_07s0141g00840.t01 | Wine grape | extracellular | 79.77 | 76.84 |
| KRG99540 | Soybean | extracellular | 64.12 | 65.37 |
| CDX85345 | Canola | plasma membrane | 54.2 | 54.41 |
| Bra037480.1-P | Field mustard | extracellular | 53.82 | 54.02 |
| CDX86299 | Canola | extracellular | 53.82 | 54.02 |
| AT5G48540.1 | Thale cress | extracellular | 53.44 | 53.23 |
| Solyc09g057960.1.1 | Tomato | extracellular, nucleus | 51.91 | 52.11 |
| PGSC0003DMT400091649 | Potato | extracellular | 52.29 | 51.7 |
| GSMUA_Achr10P... | Banana | extracellular | 47.33 | 48.44 |
| GSMUA_Achr10P... | Banana | extracellular | 45.42 | 46.3 |
| GSMUA_Achr10P... | Banana | extracellular | 45.04 | 45.91 |
| TraesCS4B01G205300.1 | Wheat | extracellular | 41.6 | 41.6 |
| TraesCS4A01G099000.1 | Wheat | extracellular | 42.37 | 41.11 |
| HORVU4Hr1G059150.3 | Barley | extracellular | 41.22 | 40.91 |
| TraesCS4D01G206200.1 | Wheat | extracellular | 41.98 | 40.74 |
| Zm00001d028651_P001 | Maize | extracellular | 41.22 | 40.3 |
| Os03t0277600-01 | Rice | extracellular | 40.08 | 39.62 |
| Os03t0277700-01 | Rice | extracellular | 40.08 | 39.62 |
| EER92464 | Sorghum | endoplasmic reticulum, extracellular | 41.22 | 39.13 |
| TraesCS1A01G035600.1 | Wheat | endoplasmic reticulum, plasma membrane | 39.31 | 37.87 |
| Os08t0136700-01 | Rice | extracellular | 38.93 | 37.23 |
| VIT_12s0059g02590.t01 | Wine grape | extracellular | 34.35 | 37.19 |
| TraesCS1B01G045300.1 | Wheat | endoplasmic reticulum, extracellular | 38.55 | 37.13 |
| Os08t0136300-01 | Rice | extracellular | 38.93 | 37.09 |
| VIT_12s0059g02580.t01 | Wine grape | extracellular | 33.97 | 36.93 |
| Os08t0136800-01 | Rice | extracellular | 37.79 | 35.87 |
| TraesCS1D01G037000.1 | Wheat | endoplasmic reticulum, vacuole | 37.4 | 35.64 |
| Os03t0312300-01 | Rice | golgi | 24.81 | 35.14 |
| Zm00001d035646_P001 | Maize | endoplasmic reticulum, extracellular | 35.88 | 34.69 |
| Os05t0112800-01 | Rice | extracellular | 35.88 | 34.56 |
| VIT_12s0059g02620.t01 | Wine grape | extracellular, plasma membrane | 33.21 | 34.52 |
| Os08t0136500-01 | Rice | endoplasmic reticulum, vacuole | 36.26 | 33.93 |
| TraesCS1D01G036900.1 | Wheat | plastid | 37.79 | 33.11 |
| EES18898 | Sorghum | cytosol, peroxisome, plastid | 37.02 | 32.12 |
| VIT_12s0059g02600.t01 | Wine grape | extracellular | 35.11 | 23.71 |
| VIT_10s0092g00670.t01 | Wine grape | endoplasmic reticulum, extracellular | 25.57 | 23.67 |
| VIT_00s0262g00090.t01 | Wine grape | mitochondrion, plasma membrane | 32.06 | 19.86 |
| VIT_02s0087g01010.t01 | Wine grape | plasma membrane | 30.92 | 18.16 |
| VIT_01s0026g02270.t01 | Wine grape | plasma membrane, vacuole | 19.08 | 16.08 |
| VIT_00s0409g00020.t01 | Wine grape | plasma membrane | 27.1 | 15.24 |
| VIT_00s0262g00130.t01 | Wine grape | endoplasmic reticulum | 27.1 | 12.35 |
Protein Annotations
| EntrezGene:100255801 | wikigene:100255801 | Gene3D:3.30.430.20 | MapMan:35.1 | EMBL:AM427427 | ProteinID:CAN64566 |
| ProteinID:CAN64566.1 | ProteinID:CBI18746 | ProteinID:CBI18746.3 | UniProt:D7SSW2 | EMBL:FN594991 | InterPro:GNK2 |
| InterPro:GNK2_sf | InterPro:IPR002902 | InterPro:IPR038408 | EntrezGene:LOC100255801 | wikigene:LOC100255801 | PFAM:PF01657 |
| PFscan:PS51473 | PANTHER:PTHR32411 | PANTHER:PTHR32411:SF43 | SignalP:SignalP-noTM | UniParc:UPI0001BE15A0 | ArrayExpress:VIT_07s0141g00930 |
| EnsemblPlantsGene:VIT_07s0141g00930 | EnsemblPlants:VIT_07s0141g00930.t01 | RefSeq:XP_002264674 | RefSeq:XP_002264674.2 | SEG:seg | : |
Description
No Description!
Coordinates
chr7_random:+:536578..538275
Molecular Weight (calculated)
29288.0 Da
IEP (calculated)
5.690
GRAVY (calculated)
-0.069
Length
262 amino acids
Sequence
(BLAST)
(BLAST)
001: MTLSHHLLLG LLLLLVVLSL WHCSADSADP LGVFCNKDTK IGSGKESANI DHLLVELVSK ASTNGFLATS YGSGQYLVYG LAQCRGDVGK EDCSTCIQDA
101: AKQIRTRCPN EADARIWFDY CFLRYSNKDF IGEVDTGFGI YYYNVDNVTE TERFNEELSK LMEKIRSQAV EPQNAGLGKG QTELTPFITL YALVQCTRDL
201: SPLSCAQCLA IAVGNFPNFC DNRKGCRVLY SSCYTRYELY PFFFPISSAK NFSNTQMMMV YP
101: AKQIRTRCPN EADARIWFDY CFLRYSNKDF IGEVDTGFGI YYYNVDNVTE TERFNEELSK LMEKIRSQAV EPQNAGLGKG QTELTPFITL YALVQCTRDL
201: SPLSCAQCLA IAVGNFPNFC DNRKGCRVLY SSCYTRYELY PFFFPISSAK NFSNTQMMMV YP
001: MKTLVVKCFL LLALVCSCRA ADSIWQLCNT NSNISASSQV SKNIDSLLAT LVSKTPSKGF KTTTSSSYNN KEKVYGLAQC RGDISNTDCS TCIQDAAKKI
101: REVCQNQSDS RILYDFCFLR YSQENFIGKL DTGAGLIYFN VANVTEIDPK KFDNELGALF DKIRSEAVLP KNKGLGKGKT KLTPFVTLNG LVQCTRDLSE
201: LDCAQCFATA VGSFMTTCHN KKGCRVLYSS CYVRYEFYPF YFPLDPAKTG PSVGRISSVH LSP
101: REVCQNQSDS RILYDFCFLR YSQENFIGKL DTGAGLIYFN VANVTEIDPK KFDNELGALF DKIRSEAVLP KNKGLGKGKT KLTPFVTLNG LVQCTRDLSE
201: LDCAQCFATA VGSFMTTCHN KKGCRVLYSS CYVRYEFYPF YFPLDPAKTG PSVGRISSVH LSP
Arabidopsis Description
CRRSP55Cysteine-rich repeat secretory protein 55 [Source:UniProtKB/Swiss-Prot;Acc:Q9LV60]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.