Factsheet for VIT_00s0262g00090.t01

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plasma membrane

Predictor Summary:

plastid 1
plasma membrane 4
extracellular 1
endoplasmic reticulum 2
vacuole 1
golgi 1
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion, plasma membrane
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	plastid
MultiLoc:	plasma membrane
Plant-mPloc:	plasma membrane
Predotar:	mitochondrion
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	endoplasmic reticulum
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH35616	Soybean	extracellular	34.75	56.32
KRH35615	Soybean	endoplasmic reticulum, extracellular	30.5	55.84
KRG91170	Soybean	plasma membrane	35.22	53.02
KRH35619	Soybean	extracellular, plasma membrane, vacuole	34.28	45.45
KRH35620	Soybean	plasma membrane	34.28	44.21
VIT_10s0092g00670.t01	Wine grape	endoplasmic reticulum, extracellular	29.31	43.82
VIT_12s0059g02590.t01	Wine grape	extracellular	24.59	42.98
VIT_00s0409g00020.t01	Wine grape	plasma membrane	45.39	41.2
KRG91167	Soybean	endoplasmic reticulum, extracellular, plasma membrane	21.51	41.18
VIT_12s0059g02580.t01	Wine grape	extracellular	23.4	41.08
VIT_12s0059g02620.t01	Wine grape	extracellular, plasma membrane	23.17	38.89
HORVU3Hr1G109450.1	Barley	endoplasmic reticulum	11.58	38.58
KRH35613	Soybean	plasma membrane	30.5	34.22
Os07t0537300-00	Rice	extracellular	22.93	33.68
VIT_00s0262g00130.t01	Wine grape	endoplasmic reticulum	44.92	33.04
VIT_07s0141g00930.t01	Wine grape	extracellular	19.86	32.06
VIT_07s0141g00870.t01	Wine grape	cytosol	11.11	31.13
TraesCS2B01G242200.1	Wheat	endoplasmic reticulum, plasma membrane	21.99	30.49
Os07t0537200-01	Rice	plasma membrane	18.68	27.15
VIT_07s0141g00840.t01	Wine grape	extracellular	17.26	26.84
TraesCS2D01G222200.1	Wheat	endoplasmic reticulum, plasma membrane	18.68	26.51
TraesCS3B01G024400.1	Wheat	extracellular	17.49	26.33
TraesCS3D01G025300.1	Wheat	extracellular, plasma membrane	17.26	26.16
Zm00001d021693_P001	Maize	endoplasmic reticulum, plasma membrane	17.49	25.78
VIT_12s0059g02600.t01	Wine grape	extracellular	23.4	25.52
VIT_02s0087g01010.t01	Wine grape	plasma membrane	26.48	25.11
TraesCS2A01G216800.1	Wheat	endoplasmic reticulum, vacuole	19.39	24.92
Os07t0540600-00	Rice	endoplasmic reticulum, plasma membrane	21.99	24.87
HORVU2Hr1G125180.2	Barley	extracellular	16.55	24.56
HORVU3Hr1G002810.2	Barley	extracellular	17.49	23.64
TraesCS1D01G431100.1	Wheat	extracellular	17.02	23.15
TraesCSU01G233400.1	Wheat	extracellular	14.89	22.58
TraesCS2B01G242400.1	Wheat	plastid	19.15	21.54
TraesCS3D01G501300.3	Wheat	plasma membrane	20.57	21.43
Os10t0329900-00	Rice	endoplasmic reticulum, plasma membrane	19.86	20.79
VIT_01s0026g02270.t01	Wine grape	plasma membrane, vacuole	14.89	20.26
TraesCS2D01G222500.1	Wheat	vacuole	19.15	19.71
Zm00001d040823_P001	Maize	plasma membrane	20.33	17.41
HORVU3Hr1G109380.8	Barley	mitochondrion	9.93	17.07
TraesCS3A01G494000.1	Wheat	plasma membrane	19.62	16.21
Zm00001d021683_P001	Maize	endoplasmic reticulum, extracellular, plasma membrane	18.68	15.52
Zm00001d030212_P001	Maize	plasma membrane	18.44	15.38
TraesCS3D01G501200.1	Wheat	plasma membrane	23.17	14.08

Protein Annotations

ArrayExpress:VIT_00s0262g00090	EMBL:FN595266	EnsemblPlants:VIT_00s0262g00090.t01	EnsemblPlantsGene:VIT_00s0262g00090	Gene3D:3.30.430.20	GO:GO:0005575
GO:GO:0016020	GO:GO:0016021	InterPro:GNK2	InterPro:GNK2_sf	InterPro:IPR002902	InterPro:IPR038408
PANTHER:PTHR32099	PANTHER:PTHR32099:SF10	PFAM:PF01657	PFscan:PS51473	ProteinID:CBI23450	ProteinID:CBI23450.3
SEG:seg	TMHMM:TMhelix	UniParc:UPI0001BE1F23	UniProt:E0CW20	MapMan:35.1	:

Description

No Description!

Coordinates

chrUn:+:18880274..18882054

Molecular Weight (calculated)

47146.8 Da

IEP (calculated)

8.462

GRAVY (calculated)

-0.051

Length

423 amino acids

Sequence
(BLAST)

001: MELFFFQRRR QKVTSYGLKS RSNGIFVTTL SCLLHLSIGA IYERVTIMDP PRLLLFLYPF LILHLLGVTV LAQTDFLYHD CSDSVGNYTD NSTYEANLNT
101: LLSSLSSNNE IDYGFYNFSY GQNSDKVNAI ALCRGDVVTD ACRSCVNDSR IQLTQLCPNQ KEAIGWYDKC MLRYSNNSIF GTAQTSLSFY MWNPENASNV
201: EDFNQVLGNL MASLRSKAAS GDSRHKFATG EANVTSFVTI YGLMQCTPDL SEASCRDCLE GATNEIPNCC DSKKGGRVIK PSCNLRFETY RFYEFTAANA
301: PPPAATPPPS PPSADLAPPP LANTTSTQGK KSNTSRTVVL IVVPSAVISV MLITFICCFL KRRQSRESVS SKLNMHYLLL TLLLAIEIII ISKNDKRQLF
401: SNNNLKIKAL LLFSARMMGR LIY

Best Arabidopsis Sequence Match ( AT3G22060.1 )
(BLAST)

001: MSSLKRIVWF PILAIAIQIL SIHTVLSQSQ NNAFLFHKCS DIEGSFTSKS LYESNLNNLF SQLSYKVPST GFAASSTGNT PNNVNGLALC RGDASSSDCR
101: SCLETAIPEL RQRCPNNKAG IVWYDNCLVK YSSTNFFGKI DFENRFYLYN VKNVSDPSTF NSQTKALLTE LTKKATTRDN QKLFATGEKN IGKNKLYGLV
201: QCTRDLKSIT CKACLNGIIG ELPNCCDGKE GGRVVGGSCN FRYEIYPFVK TA

Arabidopsis Description

CRRSP38Cysteine-rich repeat secretory protein 38 [Source:UniProtKB/Swiss-Prot;Acc:Q9LRJ9]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.