Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, plasma membrane
Predictor Summary:
Predictor Summary:
- extracellular 4
- endoplasmic reticulum 5
- vacuole 4
- plasma membrane 5
- golgi 4
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2D01G222200.1 | Wheat | endoplasmic reticulum, plasma membrane | 51.92 | 50.0 |
| HORVU2Hr1G125180.2 | Barley | extracellular | 39.72 | 40.0 |
| TraesCS1D01G431100.1 | Wheat | extracellular | 35.54 | 32.8 |
| KRH35616 | Soybean | extracellular | 24.39 | 26.82 |
| KRH35615 | Soybean | endoplasmic reticulum, extracellular | 21.25 | 26.41 |
| CDY41770 | Canola | endoplasmic reticulum, vacuole | 23.69 | 26.15 |
| Solyc02g080050.1.1 | Tomato | cytosol | 13.94 | 26.14 |
| Bra040999.1-P | Field mustard | extracellular | 22.3 | 25.4 |
| CDY01121 | Canola | extracellular | 22.3 | 25.4 |
| CDY47325 | Canola | endoplasmic reticulum, extracellular, vacuole | 21.6 | 24.51 |
| Zm00001d032401_P001 | Maize | extracellular | 21.6 | 24.22 |
| AT4G23170.1 | Thale cress | extracellular | 22.3 | 24.15 |
| Zm00001d035646_P001 | Maize | endoplasmic reticulum, extracellular | 22.3 | 23.62 |
| CDY12405 | Canola | plasma membrane | 24.04 | 23.55 |
| KRH35620 | Soybean | plasma membrane | 25.09 | 21.95 |
| KRG91170 | Soybean | plasma membrane | 21.25 | 21.71 |
| KRG91214 | Soybean | plasma membrane | 25.09 | 21.49 |
| Zm00001d028651_P001 | Maize | extracellular | 19.86 | 21.27 |
| KRG91211 | Soybean | plasma membrane | 24.74 | 21.13 |
| KRH35619 | Soybean | extracellular, plasma membrane, vacuole | 23.34 | 21.0 |
| KRG91167 | Soybean | endoplasmic reticulum, extracellular, plasma membrane | 16.03 | 20.81 |
| KRH35613 | Soybean | plasma membrane | 25.78 | 19.63 |
| VIT_10s0092g00670.t01 | Wine grape | endoplasmic reticulum, extracellular | 19.16 | 19.43 |
| Zm00001d040823_P001 | Maize | plasma membrane | 32.75 | 19.03 |
| KRH21653 | Soybean | extracellular | 18.12 | 18.57 |
| CDY41240 | Canola | extracellular, plasma membrane | 24.39 | 18.42 |
| VIT_02s0087g01010.t01 | Wine grape | plasma membrane | 27.87 | 17.94 |
| KRH13264 | Soybean | mitochondrion | 14.63 | 17.8 |
| CDY10852 | Canola | plasma membrane | 23.34 | 17.63 |
| Zm00001d030212_P001 | Maize | plasma membrane | 31.01 | 17.55 |
| VIT_00s0262g00090.t01 | Wine grape | mitochondrion, plasma membrane | 25.78 | 17.49 |
| Solyc02g080060.1.1 | Tomato | vacuole | 21.95 | 17.17 |
| CDY15079 | Canola | cytosol, plasma membrane, plastid | 19.86 | 16.81 |
| Zm00001d021683_P001 | Maize | endoplasmic reticulum, extracellular, plasma membrane | 28.57 | 16.11 |
| VIT_00s0409g00020.t01 | Wine grape | plasma membrane | 26.13 | 16.09 |
| Bra019321.1-P | Field mustard | mitochondrion | 16.03 | 16.03 |
| VIT_00s0262g00130.t01 | Wine grape | endoplasmic reticulum | 24.74 | 12.35 |
| CDY10860 | Canola | endoplasmic reticulum, plasma membrane | 11.85 | 12.01 |
| CDY39159 | Canola | plasma membrane | 24.04 | 11.46 |
| Bra029565.1-P | Field mustard | plasma membrane | 24.04 | 11.22 |
Protein Annotations
| EnsemblPlants:Zm00001d021693_P001 | EnsemblPlants:Zm00001d021693_T001 | EnsemblPlantsGene:Zm00001d021693 | Gene3D:3.30.430.20 | InterPro:GNK2 | InterPro:GNK2_sf |
| InterPro:IPR002902 | InterPro:IPR038408 | PANTHER:PTHR27002 | PANTHER:PTHR27002:SF16 | PFAM:PF01657 | PFscan:PS51473 |
| ProteinID:ONM58039.1 | SEG:seg | SignalP:SignalP-noTM | TMHMM:TMhelix | UniParc:UPI000844EE4B | UniProt:A0A1D6IE36 |
| MapMan:35.1 | : | : | : | : | : |
Description
No Description!
Coordinates
chr7:+:160360651..160361511
Molecular Weight (calculated)
30636.4 Da
IEP (calculated)
6.216
GRAVY (calculated)
0.107
Length
287 amino acids
Sequence
(BLAST)
(BLAST)
001: MAHHLMTLAA IVAAVVLLLP CATGYPWAFC GENNNFKANS SYQSHLSLVA ATLPKNASTS PDLFATAVVG TIPRQLWAMG LCRGDVDGTA CFNCLTQAFR
101: DLPNHCSYNK DATMYYDPCM LHYSNNQLIP DDDSGDFYTI NSTAAVNSDP VGFNRLVAAL VNATADYAAH KSTRRFATGE TTAGSVSEEF PKLYSLAQCT
201: PDMKAARCRE CLAALISQSL DAFQNLTLGR VLWINCTYRY EAAPFFNGPA MVQIAVPSSS VPVPAPAPTL APAIQPSYGT PAAVAGV
101: DLPNHCSYNK DATMYYDPCM LHYSNNQLIP DDDSGDFYTI NSTAAVNSDP VGFNRLVAAL VNATADYAAH KSTRRFATGE TTAGSVSEEF PKLYSLAQCT
201: PDMKAARCRE CLAALISQSL DAFQNLTLGR VLWINCTYRY EAAPFFNGPA MVQIAVPSSS VPVPAPAPTL APAIQPSYGT PAAVAGV
001: MSSLKRIVWF PILAIAIQIL SIHTVLSQSQ NNAFLFHKCS DIEGSFTSKS LYESNLNNLF SQLSYKVPST GFAASSTGNT PNNVNGLALC RGDASSSDCR
101: SCLETAIPEL RQRCPNNKAG IVWYDNCLVK YSSTNFFGKI DFENRFYLYN VKNVSDPSTF NSQTKALLTE LTKKATTRDN QKLFATGEKN IGKNKLYGLV
201: QCTRDLKSIT CKACLNGIIG ELPNCCDGKE GGRVVGGSCN FRYEIYPFVK TA
101: SCLETAIPEL RQRCPNNKAG IVWYDNCLVK YSSTNFFGKI DFENRFYLYN VKNVSDPSTF NSQTKALLTE LTKKATTRDN QKLFATGEKN IGKNKLYGLV
201: QCTRDLKSIT CKACLNGIIG ELPNCCDGKE GGRVVGGSCN FRYEIYPFVK TA
Arabidopsis Description
CRRSP38Cysteine-rich repeat secretory protein 38 [Source:UniProtKB/Swiss-Prot;Acc:Q9LRJ9]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.