Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, extracellular
Predictor Summary:
Predictor Summary:
- extracellular 6
- endoplasmic reticulum 5
- vacuole 5
- plasma membrane 6
- golgi 5
- plastid 2
Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
Ath locusA | locusB | Ath locusB | Paper |
---|---|---|---|
AT4G23170.1 | CDX73678 | AT3G51920.1 | 17360592 |
AT4G23170.1 | CDX95314 | AT3G51920.1 | 17360592 |
AT4G23170.1 | CDY23174 | AT3G51920.1 | 17360592 |
AT4G23170.1 | CDY06478 | AT4G14640.1 | 17360592 |
AT4G23170.1 | CDX92401 | AT5G21274.1 | 17360592 |
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
AT4G23170.1 | Thale cress | extracellular | 42.89 | 61.51 |
CDY10860 | Canola | endoplasmic reticulum, plasma membrane | 45.79 | 61.48 |
CDY41770 | Canola | endoplasmic reticulum, vacuole | 41.84 | 61.15 |
CDY01121 | Canola | extracellular | 39.21 | 59.13 |
CDY47325 | Canola | endoplasmic reticulum, extracellular, vacuole | 39.21 | 58.89 |
CDY10852 | Canola | plasma membrane | 55.0 | 55.0 |
CDY12405 | Canola | plasma membrane | 41.84 | 54.27 |
CDY15079 | Canola | cytosol, plasma membrane, plastid | 36.58 | 41.0 |
HORVU3Hr1G109450.1 | Barley | endoplasmic reticulum | 12.37 | 37.01 |
CDY68211 | Canola | endoplasmic reticulum, extracellular, vacuole | 21.32 | 31.76 |
CDY52060 | Canola | endoplasmic reticulum, extracellular, vacuole | 21.32 | 31.76 |
CDY57408 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 20.53 | 30.59 |
CDY39159 | Canola | plasma membrane | 47.89 | 30.23 |
Os07t0537300-00 | Rice | extracellular | 21.58 | 28.47 |
TraesCS2B01G242400.1 | Wheat | plastid | 27.89 | 28.19 |
KRG91214 | Soybean | plasma membrane | 24.74 | 28.06 |
TraesCS2B01G242200.1 | Wheat | endoplasmic reticulum, plasma membrane | 22.11 | 27.54 |
Os07t0537200-01 | Rice | plasma membrane | 21.05 | 27.49 |
TraesCS3B01G024400.1 | Wheat | extracellular | 20.26 | 27.4 |
KRG91211 | Soybean | plasma membrane | 24.21 | 27.38 |
TraesCS3D01G025300.1 | Wheat | extracellular, plasma membrane | 19.74 | 26.88 |
TraesCS2D01G222200.1 | Wheat | endoplasmic reticulum, plasma membrane | 20.53 | 26.17 |
TraesCS3D01G501300.3 | Wheat | plasma membrane | 27.11 | 25.37 |
VIT_02s0087g01010.t01 | Wine grape | plasma membrane | 29.74 | 25.34 |
CDX85345 | Canola | plasma membrane | 17.37 | 25.29 |
CDX86299 | Canola | extracellular | 17.37 | 25.29 |
TraesCS2A01G216800.1 | Wheat | endoplasmic reticulum, vacuole | 21.58 | 24.92 |
Zm00001d021693_P001 | Maize | endoplasmic reticulum, plasma membrane | 18.42 | 24.39 |
HORVU2Hr1G125180.2 | Barley | extracellular | 17.89 | 23.86 |
HORVU3Hr1G002810.2 | Barley | extracellular | 19.47 | 23.64 |
TraesCSU01G233400.1 | Wheat | extracellular | 17.11 | 23.3 |
TraesCS2D01G222500.1 | Wheat | vacuole | 23.42 | 21.65 |
TraesCS1D01G431100.1 | Wheat | extracellular | 17.63 | 21.54 |
Os07t0540600-00 | Rice | endoplasmic reticulum, plasma membrane | 21.05 | 21.39 |
Os10t0329900-00 | Rice | endoplasmic reticulum, plasma membrane | 22.11 | 20.79 |
Zm00001d040823_P001 | Maize | plasma membrane | 25.26 | 19.43 |
TraesCS3A01G494000.1 | Wheat | plasma membrane | 26.05 | 19.34 |
Zm00001d030212_P001 | Maize | plasma membrane | 24.47 | 18.34 |
HORVU3Hr1G109380.8 | Barley | mitochondrion | 11.32 | 17.48 |
Zm00001d021683_P001 | Maize | endoplasmic reticulum, extracellular, plasma membrane | 22.11 | 16.5 |
TraesCS3D01G501200.1 | Wheat | plasma membrane | 28.95 | 15.8 |
Protein Annotations
Gene3D:3.30.200.20 | Gene3D:3.30.430.20 | MapMan:35.1 | GO:A0A078HRL5 | UniProt:A0A078HRL5 | EnsemblPlants:CDY41240 |
ProteinID:CDY41240 | ProteinID:CDY41240.1 | InterPro:GNK2 | InterPro:GNK2_sf | GO:GO:0005575 | GO:GO:0016020 |
GO:GO:0016021 | EnsemblPlantsGene:GSBRNA2T00072662001 | InterPro:IPR002902 | InterPro:IPR038408 | InterPro:Kinase-like_dom_sf | PFAM:PF01657 |
PFscan:PS51473 | PANTHER:PTHR32099 | PANTHER:PTHR32099:SF13 | SUPFAM:SSF56112 | SignalP:SignalP-noTM | TMHMM:TMhelix |
UniParc:UPI0004EF1783 | SEG:seg | : | : | : | : |
Description
BnaA01g12990DBnaA01g12990D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HRL5]
Coordinates
chrLK032494:-:473..1835
Molecular Weight (calculated)
41943.2 Da
IEP (calculated)
7.461
GRAVY (calculated)
0.022
Length
380 amino acids
Sequence
(BLAST)
(BLAST)
001: MSSSTFVFLF LLSFLTSFRA CAQNPTYVYR ICPNTTTFSR NSTYLANLRT LLSSLSSPNA SYATGFQNAT VGQPPDRVTG LYLCRGDVTP EVCRRCVAFA
101: VNETFTQCPN AREVTLYYEE CMLRYSNGNI LSTLNANGEF SMENTQSITS NLVRFTELVL STMNQAATVA SNSSRKFDTV NAFTDFQTLH GLVQCTPDLT
201: NQDCLDCLSR IINQLPTDRI GGRVMVPSCF SRFELYLFYN EAAADRTPQP QLNSAPPPPP PISIPSPRPG ESGNSTVIVI AVVVPTTVIF LLLVAVLIFR
301: AKRKTTAYET EPLADGDDIA TAGSLQFDFK AIEAATDKFS QENKLGQGGF GQVYKVLINP LLTYFSIYIN MLRLCIKTIK
101: VNETFTQCPN AREVTLYYEE CMLRYSNGNI LSTLNANGEF SMENTQSITS NLVRFTELVL STMNQAATVA SNSSRKFDTV NAFTDFQTLH GLVQCTPDLT
201: NQDCLDCLSR IINQLPTDRI GGRVMVPSCF SRFELYLFYN EAAADRTPQP QLNSAPPPPP PISIPSPRPG ESGNSTVIVI AVVVPTTVIF LLLVAVLIFR
301: AKRKTTAYET EPLADGDDIA TAGSLQFDFK AIEAATDKFS QENKLGQGGF GQVYKVLINP LLTYFSIYIN MLRLCIKTIK
001: MRRNTDQESP IMSYYSSFFF LFLFSFLTSF RVSAQDPTYV YHTCQNTANY TSNSTYNNNL KTLLASLSSR NASYSTGFQN ATVGQAPDRV TGLFNCRGDV
101: STEVCRRCVS FAVNDTLTRC PNQKEATLYY DECVLRYSNQ NILSTLITTG GVILVNTRNV TSNQLDLLSD LVLPTLNQAA TVALNSSKKF GTRKNNFTAL
201: QSFYGLVQCT PDLTRQDCSR CLQLVINQIP TDRIGARIIN PSCTSRYEIY AFYTESAVPP PPPPPSISTP PVSAPPRSGK DGNSKVLVIA IVVPIIVAVL
301: LFIAGYCFLT RRARKSYYTP SAFAGDDITT ADSLQLDYRT IQTATDDFVE SNKIGQGGFG EVYKGTLSDG TEVAVKRLSK SSGQGEVEFK NEVVLVAKLQ
401: HRNLVRLLGF CLDGEERVLV YEYVPNKSLD YFLFDPAKKG QLDWTRRYKI IGGVARGILY LHQDSRLTII HRDLKASNIL LDADMNPKIA DFGMARIFGL
501: DQTEENTSRI VGTYGYMSPE YAMHGQYSMK SDVYSFGVLV LEIISGKKNS SFYQTDGAHD LVSYAWGLWS NGRPLELVDP AIVENCQRNE VVRCVHIGLL
601: CVQEDPAERP TLSTIVLMLT SNTVTLPVPR QPGLFFQSRI GKDPLDTDTT SKSLLGSVDD ASITDIHPR
101: STEVCRRCVS FAVNDTLTRC PNQKEATLYY DECVLRYSNQ NILSTLITTG GVILVNTRNV TSNQLDLLSD LVLPTLNQAA TVALNSSKKF GTRKNNFTAL
201: QSFYGLVQCT PDLTRQDCSR CLQLVINQIP TDRIGARIIN PSCTSRYEIY AFYTESAVPP PPPPPSISTP PVSAPPRSGK DGNSKVLVIA IVVPIIVAVL
301: LFIAGYCFLT RRARKSYYTP SAFAGDDITT ADSLQLDYRT IQTATDDFVE SNKIGQGGFG EVYKGTLSDG TEVAVKRLSK SSGQGEVEFK NEVVLVAKLQ
401: HRNLVRLLGF CLDGEERVLV YEYVPNKSLD YFLFDPAKKG QLDWTRRYKI IGGVARGILY LHQDSRLTII HRDLKASNIL LDADMNPKIA DFGMARIFGL
501: DQTEENTSRI VGTYGYMSPE YAMHGQYSMK SDVYSFGVLV LEIISGKKNS SFYQTDGAHD LVSYAWGLWS NGRPLELVDP AIVENCQRNE VVRCVHIGLL
601: CVQEDPAERP TLSTIVLMLT SNTVTLPVPR QPGLFFQSRI GKDPLDTDTT SKSLLGSVDD ASITDIHPR
Arabidopsis Description
CRK10Cysteine-rich receptor-like protein kinase 10 [Source:UniProtKB/Swiss-Prot;Acc:Q8GYA4]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.