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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane, extracellular

Predictor Summary:
  • extracellular 6
  • endoplasmic reticulum 5
  • vacuole 5
  • plasma membrane 6
  • golgi 5
  • plastid 2
PPI

Inferred distinct locusB in Crop

Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
AT4G23170.1 Thale cress extracellular 42.89 61.51
CDY10860 Canola endoplasmic reticulum, plasma membrane 45.79 61.48
CDY41770 Canola endoplasmic reticulum, vacuole 41.84 61.15
CDY01121 Canola extracellular 39.21 59.13
CDY47325 Canola endoplasmic reticulum, extracellular, vacuole 39.21 58.89
CDY10852 Canola plasma membrane 55.0 55.0
CDY12405 Canola plasma membrane 41.84 54.27
CDY15079 Canola cytosol, plasma membrane, plastid 36.58 41.0
HORVU3Hr1G109450.1 Barley endoplasmic reticulum 12.37 37.01
CDY68211 Canola endoplasmic reticulum, extracellular, vacuole 21.32 31.76
CDY52060 Canola endoplasmic reticulum, extracellular, vacuole 21.32 31.76
CDY57408 Canola endoplasmic reticulum, plasma membrane, vacuole 20.53 30.59
CDY39159 Canola plasma membrane 47.89 30.23
Os07t0537300-00 Rice extracellular 21.58 28.47
TraesCS2B01G242400.1 Wheat plastid 27.89 28.19
KRG91214 Soybean plasma membrane 24.74 28.06
TraesCS2B01G242200.1 Wheat endoplasmic reticulum, plasma membrane 22.11 27.54
Os07t0537200-01 Rice plasma membrane 21.05 27.49
TraesCS3B01G024400.1 Wheat extracellular 20.26 27.4
KRG91211 Soybean plasma membrane 24.21 27.38
TraesCS3D01G025300.1 Wheat extracellular, plasma membrane 19.74 26.88
TraesCS2D01G222200.1 Wheat endoplasmic reticulum, plasma membrane 20.53 26.17
TraesCS3D01G501300.3 Wheat plasma membrane 27.11 25.37
VIT_02s0087g01010.t01 Wine grape plasma membrane 29.74 25.34
CDX85345 Canola plasma membrane 17.37 25.29
CDX86299 Canola extracellular 17.37 25.29
TraesCS2A01G216800.1 Wheat endoplasmic reticulum, vacuole 21.58 24.92
Zm00001d021693_P001 Maize endoplasmic reticulum, plasma membrane 18.42 24.39
HORVU2Hr1G125180.2 Barley extracellular 17.89 23.86
HORVU3Hr1G002810.2 Barley extracellular 19.47 23.64
TraesCSU01G233400.1 Wheat extracellular 17.11 23.3
TraesCS2D01G222500.1 Wheat vacuole 23.42 21.65
TraesCS1D01G431100.1 Wheat extracellular 17.63 21.54
Os07t0540600-00 Rice endoplasmic reticulum, plasma membrane 21.05 21.39
Os10t0329900-00 Rice endoplasmic reticulum, plasma membrane 22.11 20.79
Zm00001d040823_P001 Maize plasma membrane 25.26 19.43
TraesCS3A01G494000.1 Wheat plasma membrane 26.05 19.34
Zm00001d030212_P001 Maize plasma membrane 24.47 18.34
HORVU3Hr1G109380.8 Barley mitochondrion 11.32 17.48
Zm00001d021683_P001 Maize endoplasmic reticulum, extracellular, plasma membrane 22.11 16.5
TraesCS3D01G501200.1 Wheat plasma membrane 28.95 15.8
Protein Annotations
Gene3D:3.30.200.20Gene3D:3.30.430.20MapMan:35.1GO:A0A078HRL5UniProt:A0A078HRL5EnsemblPlants:CDY41240
ProteinID:CDY41240ProteinID:CDY41240.1InterPro:GNK2InterPro:GNK2_sfGO:GO:0005575GO:GO:0016020
GO:GO:0016021EnsemblPlantsGene:GSBRNA2T00072662001InterPro:IPR002902InterPro:IPR038408InterPro:Kinase-like_dom_sfPFAM:PF01657
PFscan:PS51473PANTHER:PTHR32099PANTHER:PTHR32099:SF13SUPFAM:SSF56112SignalP:SignalP-noTMTMHMM:TMhelix
UniParc:UPI0004EF1783SEG:seg::::
Description
BnaA01g12990DBnaA01g12990D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HRL5]
Coordinates
chrLK032494:-:473..1835
Molecular Weight (calculated)
41943.2 Da
IEP (calculated)
7.461
GRAVY (calculated)
0.022
Length
380 amino acids
Sequence
(BLAST)
001: MSSSTFVFLF LLSFLTSFRA CAQNPTYVYR ICPNTTTFSR NSTYLANLRT LLSSLSSPNA SYATGFQNAT VGQPPDRVTG LYLCRGDVTP EVCRRCVAFA
101: VNETFTQCPN AREVTLYYEE CMLRYSNGNI LSTLNANGEF SMENTQSITS NLVRFTELVL STMNQAATVA SNSSRKFDTV NAFTDFQTLH GLVQCTPDLT
201: NQDCLDCLSR IINQLPTDRI GGRVMVPSCF SRFELYLFYN EAAADRTPQP QLNSAPPPPP PISIPSPRPG ESGNSTVIVI AVVVPTTVIF LLLVAVLIFR
301: AKRKTTAYET EPLADGDDIA TAGSLQFDFK AIEAATDKFS QENKLGQGGF GQVYKVLINP LLTYFSIYIN MLRLCIKTIK
Best Arabidopsis Sequence Match ( AT4G23180.1 )
(BLAST)
001: MRRNTDQESP IMSYYSSFFF LFLFSFLTSF RVSAQDPTYV YHTCQNTANY TSNSTYNNNL KTLLASLSSR NASYSTGFQN ATVGQAPDRV TGLFNCRGDV
101: STEVCRRCVS FAVNDTLTRC PNQKEATLYY DECVLRYSNQ NILSTLITTG GVILVNTRNV TSNQLDLLSD LVLPTLNQAA TVALNSSKKF GTRKNNFTAL
201: QSFYGLVQCT PDLTRQDCSR CLQLVINQIP TDRIGARIIN PSCTSRYEIY AFYTESAVPP PPPPPSISTP PVSAPPRSGK DGNSKVLVIA IVVPIIVAVL
301: LFIAGYCFLT RRARKSYYTP SAFAGDDITT ADSLQLDYRT IQTATDDFVE SNKIGQGGFG EVYKGTLSDG TEVAVKRLSK SSGQGEVEFK NEVVLVAKLQ
401: HRNLVRLLGF CLDGEERVLV YEYVPNKSLD YFLFDPAKKG QLDWTRRYKI IGGVARGILY LHQDSRLTII HRDLKASNIL LDADMNPKIA DFGMARIFGL
501: DQTEENTSRI VGTYGYMSPE YAMHGQYSMK SDVYSFGVLV LEIISGKKNS SFYQTDGAHD LVSYAWGLWS NGRPLELVDP AIVENCQRNE VVRCVHIGLL
601: CVQEDPAERP TLSTIVLMLT SNTVTLPVPR QPGLFFQSRI GKDPLDTDTT SKSLLGSVDD ASITDIHPR
Arabidopsis Description
CRK10Cysteine-rich receptor-like protein kinase 10 [Source:UniProtKB/Swiss-Prot;Acc:Q8GYA4]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.