Factsheet for VIT_02s0087g01010.t01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 2
plasma membrane 5
plastid 1
peroxisome 2
extracellular 2
endoplasmic reticulum 2
vacuole 2
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	nucleus, peroxisome, plastid, secretory
BaCelLo:	nucleus
EpiLoc:	plasma membrane
iPSORT:	plastid
MultiLoc:	peroxisome
Plant-mPloc:	nucleus
PProwler:	secretory
PTS1:	peroxisome
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

Inferred distinct locusB in Crop

locusB	locations
VIT_05s0020g04420.t01
VIT_06s0009g01910.t01
VIT_08s0040g00470.t01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G23170.1	VIT_06s0009g01910.t01	AT2G41090.1	17360592
AT4G23170.1	VIT_08s0040g00470.t01	AT2G41090.1	17360592
AT4G23170.1	VIT_06s0009g01910.t01	AT2G41100.1	17360592
AT4G23170.1	VIT_08s0040g00470.t01	AT2G41100.1	17360592
AT4G23170.1	VIT_05s0020g04420.t01	AT4G14640.1	17360592
AT4G23170.1	VIT_06s0009g01910.t01	AT5G21274.1	17360592
AT4G23170.1	VIT_08s0040g00470.t01	AT5G21274.1	17360592

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY41770	Canola	endoplasmic reticulum, vacuole	26.23	45.0
Bra040999.1-P	Field mustard	extracellular	23.77	42.06
CDY01121	Canola	extracellular	23.54	41.67
CDY47325	Canola	endoplasmic reticulum, extracellular, vacuole	23.54	41.5
VIT_12s0059g02590.t01	Wine grape	extracellular	22.2	40.91
AT4G23170.1	Thale cress	extracellular	24.22	40.75
CDY12405	Canola	plasma membrane	26.68	40.61
VIT_12s0059g02580.t01	Wine grape	extracellular	21.3	39.42
VIT_12s0059g02620.t01	Wine grape	extracellular, plasma membrane	21.97	38.89
HORVU3Hr1G109450.1	Barley	endoplasmic reticulum	10.54	37.01
KRG91214	Soybean	plasma membrane	25.11	33.43
KRG91211	Soybean	plasma membrane	24.66	32.74
VIT_10s0092g00670.t01	Wine grape	endoplasmic reticulum, extracellular	19.96	31.45
Os07t0537300-00	Rice	extracellular	20.18	31.25
VIT_07s0141g00930.t01	Wine grape	extracellular	18.16	30.92
CDY10852	Canola	plasma membrane	26.01	30.53
VIT_12s0059g02600.t01	Wine grape	extracellular	26.46	30.41
CDY41240	Canola	extracellular, plasma membrane	25.34	29.74
Os07t0537200-01	Rice	plasma membrane	18.83	28.87
TraesCS2D01G222200.1	Wheat	endoplasmic reticulum, plasma membrane	19.28	28.86
TraesCS2B01G242200.1	Wheat	endoplasmic reticulum, plasma membrane	19.28	28.2
TraesCS3D01G025300.1	Wheat	extracellular, plasma membrane	17.49	27.96
Zm00001d021693_P001	Maize	endoplasmic reticulum, plasma membrane	17.94	27.87
TraesCS3B01G024400.1	Wheat	extracellular	17.26	27.4
VIT_07s0141g00840.t01	Wine grape	extracellular	16.37	26.84
VIT_00s0262g00090.t01	Wine grape	mitochondrion, plasma membrane	25.11	26.48
VIT_07s0141g00870.t01	Wine grape	cytosol	8.74	25.83
TraesCSU01G233400.1	Wheat	extracellular	16.14	25.81
CDY15079	Canola	cytosol, plasma membrane, plastid	18.83	24.78
HORVU2Hr1G125180.2	Barley	extracellular	15.7	24.56
TraesCS2A01G216800.1	Wheat	endoplasmic reticulum, vacuole	17.94	24.32
HORVU3Hr1G002810.2	Barley	extracellular	17.04	24.28
CDY10860	Canola	endoplasmic reticulum, plasma membrane	14.35	22.61
VIT_00s0409g00020.t01	Wine grape	plasma membrane	23.54	22.53
Os07t0540600-00	Rice	endoplasmic reticulum, plasma membrane	18.83	22.46
TraesCS1D01G431100.1	Wheat	extracellular	14.8	21.22
TraesCS2B01G242400.1	Wheat	plastid	17.04	20.21
Bra029565.1-P	Field mustard	plasma membrane	26.91	19.51
TraesCS2D01G222500.1	Wheat	vacuole	17.94	19.46
CDY39159	Canola	plasma membrane	26.01	19.27
Bra019321.1-P	Field mustard	mitochondrion	12.11	18.82
HORVU3Hr1G109380.8	Barley	mitochondrion	10.31	18.7
Os10t0329900-00	Rice	endoplasmic reticulum, plasma membrane	16.82	18.56
TraesCS3D01G501300.3	Wheat	plasma membrane	16.82	18.47
VIT_01s0026g02270.t01	Wine grape	plasma membrane, vacuole	12.56	18.01
VIT_00s0262g00130.t01	Wine grape	endoplasmic reticulum	23.09	17.91
Zm00001d040823_P001	Maize	plasma membrane	18.39	16.6
TraesCS3A01G494000.1	Wheat	plasma membrane	16.82	14.65
Zm00001d030212_P001	Maize	plasma membrane	16.59	14.6
Zm00001d021683_P001	Maize	endoplasmic reticulum, extracellular, plasma membrane	16.37	14.34
TraesCS3D01G501200.1	Wheat	plasma membrane	17.94	11.49

Protein Annotations

Gene3D:1.10.510.10	Gene3D:3.30.430.20	MapMan:35.1	ProteinID:CCB52207	ProteinID:CCB52207.1	UniProt:F6HJ10
EMBL:FN595769	InterPro:GNK2	InterPro:GNK2_sf	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538
InterPro:IPR002902	InterPro:IPR038408	InterPro:Kinase-like_dom_sf	PFAM:PF01657	PFAM:PF07714	PFscan:PS51473
PANTHER:PTHR32099	PANTHER:PTHR32099:SF13	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	UniParc:UPI0002109309	ArrayExpress:VIT_02s0087g01010
EnsemblPlantsGene:VIT_02s0087g01010	EnsemblPlants:VIT_02s0087g01010.t01	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr2:+:18746619..18751138

Molecular Weight (calculated)

48841.5 Da

IEP (calculated)

5.903

GRAVY (calculated)

0.041

Length

446 amino acids

Sequence
(BLAST)

001: MVVACSGYMS LEYAMQGQFS NKSDLYSFGV LILEIISAKK NSSFYQSDHA EDLLSHTWRL WKNGTPMDPT IGDSYTRNEV IKCIHISLLC VQEVPYDRPS
101: MAFIVLMLNS YSSIRIRSIC NQVYWCCANW IQVFLASLES DRLFPCTKGL ILHCKLEEEI VVMKVSFSRN LLFLCALGLA ISCLAIQAAP DYIHHVCSNT
201: TTIQPNSTYQ TNLNSLLSSL SSNATRANGF YNATAGQSPD VAYGLFLCRG DVAIDDCRDC VANASAEILQ QCSGVKKAII WYDQCMLHYS NRSIFSRVEE
301: NPMLQLYNLQ NVTDPGPFNQ LVVDTMNATA TLAANDESGK KFATKEENFT GSQTLYSLVQ CTPDLSIADC SKCLEGAIGA LSLCCSGKQG ARTLTPSCNA
401: RYELYPFYQL EAGPLAPALA PAPTSATVLL PPPPAPSSKS SATGKL

Best Arabidopsis Sequence Match ( AT4G05200.1 )
(BLAST)

001: MSSCFKSSVS LFSVFLFMIL KTVTSDPTYL YHICPNTTTY SRNSSYLTNL RTVLSSLSSP NAAYASLFDN AAAGEENDSN RVYGVFLCRG DVSAEICRDC
101: VAFAANETLQ RCPREKVAVI WYDECMVRYS NQSIVGQMRI RPGVFLTNKQ NITENQVSRF NESLPALLID VAVKAALSSR KFATEKANFT VFQTIYSLVQ
201: CTPDLTNQDC ESCLRQVINY LPRCCDRSVG GRVIAPSCSF RYELYPFYNE TIAAAPMAPP PSSTVTAPPL NIPSEKGKGK NLTVIVTAIA VPVSVCVLLL
301: GAMCWLLARR RNNKLSAETE DLDEDGITST ETLQFQFSAI EAATNKFSES NKLGHGGFGE VYKGQLITGE TVAIKRLSQG STQGAEEFKN EVDVVAKLQH
401: RNLAKLLGYC LDGEEKILVY EFVPNKSLDY FLFDNEKRRV LDWQRRYKII EGIARGILYL HRDSRLTIIH RDLKASNILL DADMHPKISD FGMARIFGVD
501: QTQANTKRIV GTYGYMSPEY AIHGKYSVKS DVYSFGVLVL ELITGKKNSS FYEEDGLGDL VTYVWKLWVE NSPLELVDEA MRGNFQTNEV IRCIHIALLC
601: VQEDSSERPS MDDILVMMNS FTVTLPIPKR SGFLLRTMKD SRDPRSGGSA SDHSATSKSL PLSVDDSSIT IVYPR

Arabidopsis Description

CRK25cysteine-rich RLK (RECEPTOR-like protein kinase) 25 [Source:TAIR;Acc:AT4G05200]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.