CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 7
endoplasmic reticulum 5
vacuole 5
plasma membrane 5
golgi 5
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	plastid, secretory
BaCelLo:	secretory
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

Inferred distinct locusB in Crop

locusB	locations
CDX73678
CDX92401
CDX95314
CDY06478
CDY23174

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G23170.1	CDX73678	AT3G51920.1	17360592
AT4G23170.1	CDX95314	AT3G51920.1	17360592
AT4G23170.1	CDY23174	AT3G51920.1	17360592
AT4G23170.1	CDY06478	AT4G14640.1	17360592
AT4G23170.1	CDX92401	AT5G21274.1	17360592

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra040999.1-P	Field mustard	extracellular	99.21	99.21
CDY47325	Canola	endoplasmic reticulum, extracellular, vacuole	97.22	96.84
CDY41770	Canola	endoplasmic reticulum, vacuole	60.71	58.85
AT4G23170.1	Thale cress	extracellular	61.11	58.11
CDY12405	Canola	plasma membrane	59.92	51.54
CDY41240	Canola	extracellular, plasma membrane	59.13	39.21
CDY15079	Canola	cytosol, plasma membrane, plastid	45.63	33.92
CDY10852	Canola	plasma membrane	49.6	32.89
HORVU3Hr1G109450.1	Barley	endoplasmic reticulum	15.48	30.71
CDY52060	Canola	endoplasmic reticulum, extracellular, vacuole	30.95	30.59
CDY68211	Canola	endoplasmic reticulum, extracellular, vacuole	30.95	30.59
CDY57408	Canola	endoplasmic reticulum, plasma membrane, vacuole	30.56	30.2
CDY10860	Canola	endoplasmic reticulum, plasma membrane	32.14	28.62
CDX85345	Canola	plasma membrane	28.57	27.59
CDX86299	Canola	extracellular	28.57	27.59
KRG91214	Soybean	plasma membrane	34.92	26.27
Os07t0537300-00	Rice	extracellular	29.76	26.04
KRG91211	Soybean	plasma membrane	33.73	25.3
TraesCS3B01G024400.1	Wheat	extracellular	28.17	25.27
TraesCS3D01G025300.1	Wheat	extracellular, plasma membrane	27.78	25.09
Os07t0537200-01	Rice	plasma membrane	28.57	24.74
TraesCS2B01G242200.1	Wheat	endoplasmic reticulum, plasma membrane	28.97	23.93
VIT_02s0087g01010.t01	Wine grape	plasma membrane	41.67	23.54
TraesCSU01G233400.1	Wheat	extracellular	25.79	23.3
TraesCS2D01G222200.1	Wheat	endoplasmic reticulum, plasma membrane	26.98	22.82
HORVU3Hr1G002810.2	Barley	extracellular	27.78	22.36
Zm00001d021693_P001	Maize	endoplasmic reticulum, plasma membrane	25.4	22.3
HORVU2Hr1G125180.2	Barley	extracellular	25.0	22.11
TraesCS2A01G216800.1	Wheat	endoplasmic reticulum, vacuole	28.57	21.88
CDY39159	Canola	plasma membrane	45.63	19.1
TraesCS1D01G431100.1	Wheat	extracellular	23.02	18.65
Os07t0540600-00	Rice	endoplasmic reticulum, plasma membrane	26.98	18.18
TraesCS2B01G242400.1	Wheat	plastid	26.59	17.82
TraesCS3D01G501300.3	Wheat	plasma membrane	28.17	17.49
Os10t0329900-00	Rice	endoplasmic reticulum, plasma membrane	27.38	17.08
TraesCS2D01G222500.1	Wheat	vacuole	26.59	16.3
Zm00001d040823_P001	Maize	plasma membrane	30.16	15.38
HORVU3Hr1G109380.8	Barley	mitochondrion	14.29	14.63
TraesCS3A01G494000.1	Wheat	plasma membrane	27.38	13.48
Zm00001d021683_P001	Maize	endoplasmic reticulum, extracellular, plasma membrane	26.98	13.36
Zm00001d030212_P001	Maize	plasma membrane	25.4	12.62
TraesCS3D01G501200.1	Wheat	plasma membrane	28.57	10.34

Protein Annotations

EnsemblPlants:CDY01121	EnsemblPlantsGene:GSBRNA2T00111182001	Gene3D:3.30.430.20	InterPro:GNK2	InterPro:GNK2_sf	InterPro:IPR002902
InterPro:IPR038408	PANTHER:PTHR32099	PANTHER:PTHR32099:SF13	PFAM:PF01657	PFscan:PS51473	ProteinID:CDY01121
ProteinID:CDY01121.1	SEG:seg	SignalP:SignalP-noTM	UniParc:UPI0004EEFD77	MapMan:35.1	:

Description

BnaA04g06980D

Coordinates

chrLK031924:-:165611..166369

Molecular Weight (calculated)

28122.0 Da

IEP (calculated)

8.329

GRAVY (calculated)

-0.276

Length

252 amino acids

Sequence
(BLAST)

001: MSSWGTFFFL SFFSVFTCIK VSSQDLTLLY NFCPNTTTYS RNSTYYTNLK TLLASFSSPN SSYSTGFQSG KAGQAPDTVT GLFLCRGDVS QESCRNCVAF
101: AVNESLTRCP NQSEAVLYYD ECTLRYSHRN ILSTLRTDGG YTLPNVNNIP RNQQDRFRDL VLATLNQAAT KAVASSRKFD ARKVNFTALQ SLYGLVQCTP
201: DLTGQDCLRC LQTSINQLPT ERTGARLLLP SCGSRYELYP FYNESAVTTQ TN

Best Arabidopsis Sequence Match ( AT4G23170.1 )
(BLAST)

001: MSSLISFIFL FLFSFLTSFK ASAQDPFYLN HYCPNTTTYS RFSTYSTNLR TLLSSFASRN ASYSTGFQNV TVGQTPDLVT GLFLCRGDLS PEVCSNCVAF
101: SVDEALTRCP SQREAVFYYE ECILRYSDKN ILSTAITNEG EFILSNTNTI SPNQSQINQF IVLVQSNMNQ AAMEAANSSR KFSTIKTELT ELQTLYGLVQ
201: CTPDLTSQDC LRCLTRSINR MPLSRIGARQ FWPSCNSRYE LYSFYNETTI GTPSPPPPPS PSRAN

Arabidopsis Description

CRK9Putative cysteine-rich receptor-like protein kinase 9 [Source:UniProtKB/Swiss-Prot;Acc:O65469]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.