Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, plasma membrane
Predictor Summary:
Predictor Summary:
- extracellular 4
- endoplasmic reticulum 5
- vacuole 4
- plasma membrane 5
- golgi 4
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2A01G216800.1 | Wheat | endoplasmic reticulum, vacuole | 78.69 | 72.95 |
| Os07t0537300-00 | Rice | extracellular | 57.38 | 60.76 |
| Os07t0537200-01 | Rice | plasma membrane | 45.57 | 47.77 |
| TraesCS2D01G222500.1 | Wheat | vacuole | 46.23 | 34.31 |
| KRH35616 | Soybean | extracellular | 28.2 | 32.95 |
| CDY41770 | Canola | endoplasmic reticulum, vacuole | 27.21 | 31.92 |
| KRH35615 | Soybean | endoplasmic reticulum, extracellular | 23.28 | 30.74 |
| AT4G23170.1 | Thale cress | extracellular | 26.23 | 30.19 |
| CDY01121 | Canola | extracellular | 23.93 | 28.97 |
| Bra040999.1-P | Field mustard | extracellular | 23.93 | 28.97 |
| CDY47325 | Canola | endoplasmic reticulum, extracellular, vacuole | 23.93 | 28.85 |
| CDY12405 | Canola | plasma membrane | 27.54 | 28.67 |
| TraesCS3B01G024400.1 | Wheat | extracellular | 25.57 | 27.76 |
| TraesCS1B01G045300.1 | Wheat | endoplasmic reticulum, extracellular | 24.59 | 27.57 |
| TraesCS2B01G242400.1 | Wheat | plastid | 33.44 | 27.13 |
| KRG91170 | Soybean | plasma membrane | 24.92 | 27.05 |
| Solyc02g080050.1.1 | Tomato | cytosol | 13.44 | 26.8 |
| KRG91167 | Soybean | endoplasmic reticulum, extracellular, plasma membrane | 19.34 | 26.7 |
| TraesCS4B01G205300.1 | Wheat | extracellular | 22.62 | 26.34 |
| VIT_10s0092g00670.t01 | Wine grape | endoplasmic reticulum, extracellular | 23.28 | 25.09 |
| KRH35620 | Soybean | plasma membrane | 26.56 | 24.7 |
| KRH35619 | Soybean | extracellular, plasma membrane, vacuole | 24.92 | 23.82 |
| TraesCS4B01G355900.1 | Wheat | endoplasmic reticulum | 18.36 | 23.63 |
| KRG91214 | Soybean | plasma membrane | 25.25 | 22.99 |
| CDY10852 | Canola | plasma membrane | 28.52 | 22.89 |
| KRH21653 | Soybean | extracellular | 20.66 | 22.5 |
| KRG91211 | Soybean | plasma membrane | 24.59 | 22.32 |
| CDY41240 | Canola | extracellular, plasma membrane | 27.54 | 22.11 |
| KRH13264 | Soybean | mitochondrion | 17.05 | 22.03 |
| VIT_00s0262g00090.t01 | Wine grape | mitochondrion, plasma membrane | 30.49 | 21.99 |
| Solyc02g080060.1.1 | Tomato | vacuole | 25.9 | 21.53 |
| KRH35613 | Soybean | plasma membrane | 25.57 | 20.69 |
| VIT_02s0087g01010.t01 | Wine grape | plasma membrane | 28.2 | 19.28 |
| VIT_00s0409g00020.t01 | Wine grape | plasma membrane | 28.85 | 18.88 |
| CDY15079 | Canola | cytosol, plasma membrane, plastid | 20.66 | 18.58 |
| Bra019321.1-P | Field mustard | mitochondrion | 15.74 | 16.72 |
| VIT_00s0262g00130.t01 | Wine grape | endoplasmic reticulum | 27.54 | 14.61 |
| CDY10860 | Canola | endoplasmic reticulum, plasma membrane | 13.11 | 14.13 |
| CDY39159 | Canola | plasma membrane | 24.26 | 12.29 |
| Bra029565.1-P | Field mustard | plasma membrane | 24.59 | 12.2 |
Protein Annotations
| EnsemblPlants:TraesCS2B01G242200.1 | EnsemblPlantsGene:TraesCS2B01G242200 | Gene3D:3.30.430.20 | InterPro:GNK2 | InterPro:GNK2_sf | InterPro:IPR002902 |
| InterPro:IPR038408 | PANTHER:PTHR27002 | PANTHER:PTHR27002:SF347 | PFAM:PF01657 | PFscan:PS51473 | SEG:seg |
| SignalP:SignalP-noTM | TMHMM:TMhelix | MapMan:35.1 | : | : | : |
Description
No Description!
Coordinates
chr2B:-:246005636..246006553
Molecular Weight (calculated)
32378.5 Da
IEP (calculated)
7.773
GRAVY (calculated)
-0.051
Length
305 amino acids
Sequence
(BLAST)
(BLAST)
001: MAPHHRCRIP SYLATAAALL LAFLLPPLAA SQWQNCGKNG NFNQNSTYQA NIQALSVTLP KNASSSRTLF AADSVGTVPD IVYALALCRG DANASACGAC
101: VSNGFKDAQQ LCPYSKVAAV YYDLCYLGFS NQNILSATDG DNNALMLVNG QNVTVPAKVF EAAVGVLMNA TADYAAADSS RRFGTGEEGF ETIDKAKPKI
201: YGVAQCRPDM SPADCRSCLA DIITYIPQYL TGRRGARVVG LRCNYRYEQY SFFTGPSMLQ LPAPSVGAPP SPAPANVTPP PVGGGELGEI TSSYLRCTIQ
301: SLDQK
101: VSNGFKDAQQ LCPYSKVAAV YYDLCYLGFS NQNILSATDG DNNALMLVNG QNVTVPAKVF EAAVGVLMNA TADYAAADSS RRFGTGEEGF ETIDKAKPKI
201: YGVAQCRPDM SPADCRSCLA DIITYIPQYL TGRRGARVVG LRCNYRYEQY SFFTGPSMLQ LPAPSVGAPP SPAPANVTPP PVGGGELGEI TSSYLRCTIQ
301: SLDQK
001: MSSLKRIVWF PILAIAIQIL SIHTVLSQSQ NNAFLFHKCS DIEGSFTSKS LYESNLNNLF SQLSYKVPST GFAASSTGNT PNNVNGLALC RGDASSSDCR
101: SCLETAIPEL RQRCPNNKAG IVWYDNCLVK YSSTNFFGKI DFENRFYLYN VKNVSDPSTF NSQTKALLTE LTKKATTRDN QKLFATGEKN IGKNKLYGLV
201: QCTRDLKSIT CKACLNGIIG ELPNCCDGKE GGRVVGGSCN FRYEIYPFVK TA
101: SCLETAIPEL RQRCPNNKAG IVWYDNCLVK YSSTNFFGKI DFENRFYLYN VKNVSDPSTF NSQTKALLTE LTKKATTRDN QKLFATGEKN IGKNKLYGLV
201: QCTRDLKSIT CKACLNGIIG ELPNCCDGKE GGRVVGGSCN FRYEIYPFVK TA
Arabidopsis Description
CRRSP38Cysteine-rich repeat secretory protein 38 [Source:UniProtKB/Swiss-Prot;Acc:Q9LRJ9]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.