Factsheet for TraesCSU01G233400.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 7
endoplasmic reticulum 5
vacuole 5
plasma membrane 5
golgi 5
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	plastid, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS1A01G308700.1
TraesCS1A01G308800.1
TraesCS1B01G319300.1
TraesCS1D01G308000.1
TraesCS2B01G113800.2
TraesCS3A01G184500.1
TraesCS3A01G191900.1
TraesCS3A01G335000.1
TraesCS3B01G219900.1
TraesCS3B01G365900.1
TraesCS3D01G188600.1
TraesCS3D01G194500.2
TraesCS3D01G328300.1
TraesCS4B01G131100.1
TraesCS4D01G126100.1
TraesCS5A01G057100.1
TraesCS5A01G057200.1
TraesCS5A01G139700.1
TraesCS5A01G382800.2
TraesCS5B01G059900.1
TraesCS5B01G137100.1
TraesCS5D01G068000.1
TraesCS5D01G068100.1
TraesCS5D01G153400.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G23170.1	TraesCS1A01G308700.1	AT2G41090.1	17360592
AT4G23170.1	TraesCS1A01G308800.1	AT2G41090.1	17360592
AT4G23170.1	TraesCS1B01G319300.1	AT2G41090.1	17360592
AT4G23170.1	TraesCS1D01G308000.1	AT2G41090.1	17360592
AT4G23170.1	TraesCS2B01G113800.2	AT2G41090.1	17360592
AT4G23170.1	TraesCS3A01G184500.1	AT2G41090.1	17360592
AT4G23170.1	TraesCS3A01G191900.1	AT2G41090.1	17360592
AT4G23170.1	TraesCS3A01G335000.1	AT2G41090.1	17360592
AT4G23170.1	TraesCS3B01G219900.1	AT2G41090.1	17360592
AT4G23170.1	TraesCS3B01G365900.1	AT2G41090.1	17360592
AT4G23170.1	TraesCS3D01G188600.1	AT2G41090.1	17360592
AT4G23170.1	TraesCS3D01G194500.2	AT2G41090.1	17360592
AT4G23170.1	TraesCS3D01G328300.1	AT2G41090.1	17360592
AT4G23170.1	TraesCS4B01G131100.1	AT2G41090.1	17360592
AT4G23170.1	TraesCS4D01G126100.1	AT2G41090.1	17360592
AT4G23170.1	TraesCS5A01G057100.1	AT2G41090.1	17360592
AT4G23170.1	TraesCS5A01G057200.1	AT2G41090.1	17360592
AT4G23170.1	TraesCS5A01G139700.1	AT2G41090.1	17360592
AT4G23170.1	TraesCS5B01G059900.1	AT2G41090.1	17360592
AT4G23170.1	TraesCS5B01G137100.1	AT2G41090.1	17360592
AT4G23170.1	TraesCS5D01G068000.1	AT2G41090.1	17360592
AT4G23170.1	TraesCS5D01G068100.1	AT2G41090.1	17360592
AT4G23170.1	TraesCS5D01G153400.1	AT2G41090.1	17360592
AT4G23170.1	TraesCS1A01G308700.1	AT2G41100.1	17360592
AT4G23170.1	TraesCS1A01G308800.1	AT2G41100.1	17360592
AT4G23170.1	TraesCS1B01G319300.1	AT2G41100.1	17360592
AT4G23170.1	TraesCS1D01G308000.1	AT2G41100.1	17360592
AT4G23170.1	TraesCS2B01G113800.2	AT2G41100.1	17360592
AT4G23170.1	TraesCS3A01G184500.1	AT2G41100.1	17360592
AT4G23170.1	TraesCS3A01G191900.1	AT2G41100.1	17360592
AT4G23170.1	TraesCS3A01G335000.1	AT2G41100.1	17360592
AT4G23170.1	TraesCS3B01G219900.1	AT2G41100.1	17360592
AT4G23170.1	TraesCS3B01G365900.1	AT2G41100.1	17360592
AT4G23170.1	TraesCS3D01G188600.1	AT2G41100.1	17360592
AT4G23170.1	TraesCS3D01G194500.2	AT2G41100.1	17360592
AT4G23170.1	TraesCS3D01G328300.1	AT2G41100.1	17360592
AT4G23170.1	TraesCS4B01G131100.1	AT2G41100.1	17360592
AT4G23170.1	TraesCS4D01G126100.1	AT2G41100.1	17360592
AT4G23170.1	TraesCS5A01G057100.1	AT2G41100.1	17360592
AT4G23170.1	TraesCS5A01G057200.1	AT2G41100.1	17360592
AT4G23170.1	TraesCS5A01G139700.1	AT2G41100.1	17360592
AT4G23170.1	TraesCS5B01G059900.1	AT2G41100.1	17360592
AT4G23170.1	TraesCS5B01G137100.1	AT2G41100.1	17360592
AT4G23170.1	TraesCS5D01G068000.1	AT2G41100.1	17360592
AT4G23170.1	TraesCS5D01G068100.1	AT2G41100.1	17360592
AT4G23170.1	TraesCS5D01G153400.1	AT2G41100.1	17360592
AT4G23170.1	TraesCS5A01G382800.2	AT4G14640.1	17360592
AT4G23170.1	TraesCS1A01G308700.1	AT5G21274.1	17360592
AT4G23170.1	TraesCS1A01G308800.1	AT5G21274.1	17360592
AT4G23170.1	TraesCS1B01G319300.1	AT5G21274.1	17360592
AT4G23170.1	TraesCS1D01G308000.1	AT5G21274.1	17360592
AT4G23170.1	TraesCS2B01G113800.2	AT5G21274.1	17360592
AT4G23170.1	TraesCS3A01G184500.1	AT5G21274.1	17360592
AT4G23170.1	TraesCS3A01G191900.1	AT5G21274.1	17360592
AT4G23170.1	TraesCS3A01G335000.1	AT5G21274.1	17360592
AT4G23170.1	TraesCS3B01G219900.1	AT5G21274.1	17360592
AT4G23170.1	TraesCS3B01G365900.1	AT5G21274.1	17360592
AT4G23170.1	TraesCS3D01G188600.1	AT5G21274.1	17360592
AT4G23170.1	TraesCS3D01G194500.2	AT5G21274.1	17360592
AT4G23170.1	TraesCS3D01G328300.1	AT5G21274.1	17360592
AT4G23170.1	TraesCS4B01G131100.1	AT5G21274.1	17360592
AT4G23170.1	TraesCS4D01G126100.1	AT5G21274.1	17360592
AT4G23170.1	TraesCS5A01G057100.1	AT5G21274.1	17360592
AT4G23170.1	TraesCS5A01G057200.1	AT5G21274.1	17360592
AT4G23170.1	TraesCS5A01G139700.1	AT5G21274.1	17360592
AT4G23170.1	TraesCS5B01G059900.1	AT5G21274.1	17360592
AT4G23170.1	TraesCS5B01G137100.1	AT5G21274.1	17360592
AT4G23170.1	TraesCS5D01G068000.1	AT5G21274.1	17360592
AT4G23170.1	TraesCS5D01G068100.1	AT5G21274.1	17360592
AT4G23170.1	TraesCS5D01G153400.1	AT5G21274.1	17360592

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU3Hr1G109450.1	Barley	endoplasmic reticulum	20.07	44.09
CDY41770	Canola	endoplasmic reticulum, vacuole	25.45	27.31
Bra040999.1-P	Field mustard	extracellular	23.66	26.19
CDY01121	Canola	extracellular	23.3	25.79
CDY47325	Canola	endoplasmic reticulum, extracellular, vacuole	23.3	25.69
CDY12405	Canola	plasma membrane	26.16	24.91
KRH35616	Soybean	extracellular	23.3	24.9
Solyc02g080050.1.1	Tomato	cytosol	13.62	24.84
AT4G23170.1	Thale cress	extracellular	23.3	24.53
KRG91167	Soybean	endoplasmic reticulum, extracellular, plasma membrane	18.28	23.08
KRH35615	Soybean	endoplasmic reticulum, extracellular	19.0	22.94
Zm00001d040823_P001	Maize	plasma membrane	38.35	21.66
TraesCS3D01G501300.3	Wheat	plasma membrane	31.18	21.43
KRH35620	Soybean	plasma membrane	24.73	21.04
KRH35619	Soybean	extracellular, plasma membrane, vacuole	24.01	21.0
KRH13264	Soybean	mitochondrion	17.56	20.76
VIT_10s0092g00670.t01	Wine grape	endoplasmic reticulum, extracellular	20.79	20.49
KRG91170	Soybean	plasma membrane	20.07	19.93
KRH35613	Soybean	plasma membrane	26.52	19.63
HORVU3Hr1G109380.8	Barley	mitochondrion	17.2	19.51
KRG91214	Soybean	plasma membrane	22.94	19.1
KRG91211	Soybean	plasma membrane	22.22	18.45
Solyc02g080060.1.1	Tomato	vacuole	23.3	17.71
KRH21653	Soybean	extracellular	17.56	17.5
CDY41240	Canola	extracellular, plasma membrane	23.3	17.11
CDY10852	Canola	plasma membrane	23.3	17.11
TraesCS3A01G494000.1	Wheat	plasma membrane	30.47	16.6
VIT_02s0087g01010.t01	Wine grape	plasma membrane	25.81	16.14
VIT_00s0262g00090.t01	Wine grape	mitochondrion, plasma membrane	22.58	14.89
VIT_00s0409g00020.t01	Wine grape	plasma membrane	24.73	14.81
CDY15079	Canola	cytosol, plasma membrane, plastid	17.56	14.45
VIT_00s0262g00130.t01	Wine grape	endoplasmic reticulum	25.81	12.52
TraesCS3D01G501200.1	Wheat	plasma membrane	30.11	12.07
CDY10860	Canola	endoplasmic reticulum, plasma membrane	12.19	12.01
CDY39159	Canola	plasma membrane	25.45	11.79
Bra029565.1-P	Field mustard	plasma membrane	25.45	11.54
Bra019321.1-P	Field mustard	mitochondrion	11.11	10.8

Protein Annotations

EnsemblPlants:TraesCSU01G233400.1	EnsemblPlantsGene:TraesCSU01G233400	Gene3D:3.30.430.20	InterPro:GNK2	InterPro:GNK2_sf	InterPro:IPR002902
InterPro:IPR038408	PANTHER:PTHR27002	PANTHER:PTHR27002:SF203	PFAM:PF01657	PFscan:PS51473	SEG:seg
SignalP:SignalP-noTM	TMHMM:TMhelix	MapMan:35.1	:	:	:

Description

No Description!

Coordinates

chrUn:+:345446850..345447689

Molecular Weight (calculated)

30132.1 Da

IEP (calculated)

5.983

GRAVY (calculated)

0.213

Length

279 amino acids

Sequence
(BLAST)

001: MMCMRRHVHV VAFALAVAGV LTTLAADKPV VVCGTAGNYT ANSAYQGNLR LVAAGLPTNI STSPGLFATA ENGAEPDRAY AVGICRGDQD ASACQACIAP
101: TFKDAQDLCP YNRGATIFYD TCLLSFSDRD LLLSPTNSND EVMRLYNAGN ITSDVVSQFN AAVYKLLDAM VEYVETIDSV RRFATGTIGF DATYPIIYSM
201: VWCTPDLTHG QCRACLSATV AQMPYTFIPN TQGATITGLR CSVRYEVHPF YKGVTMLQLT GTSPGVLIHS WIFPFCFAN

Best Arabidopsis Sequence Match ( AT4G05200.1 )
(BLAST)

001: MSSCFKSSVS LFSVFLFMIL KTVTSDPTYL YHICPNTTTY SRNSSYLTNL RTVLSSLSSP NAAYASLFDN AAAGEENDSN RVYGVFLCRG DVSAEICRDC
101: VAFAANETLQ RCPREKVAVI WYDECMVRYS NQSIVGQMRI RPGVFLTNKQ NITENQVSRF NESLPALLID VAVKAALSSR KFATEKANFT VFQTIYSLVQ
201: CTPDLTNQDC ESCLRQVINY LPRCCDRSVG GRVIAPSCSF RYELYPFYNE TIAAAPMAPP PSSTVTAPPL NIPSEKGKGK NLTVIVTAIA VPVSVCVLLL
301: GAMCWLLARR RNNKLSAETE DLDEDGITST ETLQFQFSAI EAATNKFSES NKLGHGGFGE VYKGQLITGE TVAIKRLSQG STQGAEEFKN EVDVVAKLQH
401: RNLAKLLGYC LDGEEKILVY EFVPNKSLDY FLFDNEKRRV LDWQRRYKII EGIARGILYL HRDSRLTIIH RDLKASNILL DADMHPKISD FGMARIFGVD
501: QTQANTKRIV GTYGYMSPEY AIHGKYSVKS DVYSFGVLVL ELITGKKNSS FYEEDGLGDL VTYVWKLWVE NSPLELVDEA MRGNFQTNEV IRCIHIALLC
601: VQEDSSERPS MDDILVMMNS FTVTLPIPKR SGFLLRTMKD SRDPRSGGSA SDHSATSKSL PLSVDDSSIT IVYPR

Arabidopsis Description

CRK25cysteine-rich RLK (RECEPTOR-like protein kinase) 25 [Source:TAIR;Acc:AT4G05200]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.