Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, endoplasmic reticulum, vacuole
Predictor Summary:
Predictor Summary:
- plastid 1
- extracellular 4
- golgi 4
- plasma membrane 5
- endoplasmic reticulum 5
- vacuole 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra031321.1-P | Field mustard | endoplasmic reticulum, plasma membrane, vacuole | 99.61 | 99.61 |
| CDY68211 | Canola | endoplasmic reticulum, extracellular, vacuole | 94.9 | 94.9 |
| CDY52060 | Canola | endoplasmic reticulum, extracellular, vacuole | 94.9 | 94.9 |
| AT3G22060.1 | Thale cress | extracellular | 78.04 | 78.97 |
| PGSC0003DMT400034269 | Potato | mitochondrion | 26.27 | 61.47 |
| VIT_12s0059g02590.t01 | Wine grape | extracellular | 52.55 | 55.37 |
| KRH26837 | Soybean | cytosol | 37.65 | 55.17 |
| KRH22515 | Soybean | endoplasmic reticulum, extracellular | 51.37 | 53.47 |
| KRH22514 | Soybean | endoplasmic reticulum, extracellular | 50.98 | 53.28 |
| VIT_12s0059g02620.t01 | Wine grape | extracellular, plasma membrane | 51.76 | 52.38 |
| PGSC0003DMT400034271 | Potato | endoplasmic reticulum, extracellular, vacuole | 48.63 | 51.67 |
| Solyc12g005720.1.1 | Tomato | extracellular | 47.84 | 50.83 |
| VIT_12s0059g02580.t01 | Wine grape | extracellular | 47.45 | 50.21 |
| GSMUA_Achr4P23960_001 | Banana | mitochondrion | 37.25 | 49.74 |
| KRH26839 | Soybean | cytosol | 38.04 | 48.02 |
| KRH22513 | Soybean | cytosol | 29.41 | 45.45 |
| VIT_12s0059g02600.t01 | Wine grape | extracellular | 50.98 | 33.51 |
| TraesCS5A01G525100.1 | Wheat | endoplasmic reticulum, extracellular | 30.59 | 32.77 |
| TraesCS4D01G349300.1 | Wheat | endoplasmic reticulum | 30.2 | 32.49 |
| TraesCS4B01G355900.1 | Wheat | endoplasmic reticulum | 30.2 | 32.49 |
| CDY41770 | Canola | endoplasmic reticulum, vacuole | 32.94 | 32.31 |
| Os03t0564600-01 | Rice | extracellular | 30.98 | 32.11 |
| CDY01121 | Canola | extracellular | 30.2 | 30.56 |
| HORVU3Hr1G052170.1 | Barley | cytosol | 18.43 | 30.32 |
| CDX86299 | Canola | extracellular | 30.98 | 30.27 |
| CDX85345 | Canola | plasma membrane | 30.98 | 30.27 |
| CDY47325 | Canola | endoplasmic reticulum, extracellular, vacuole | 29.41 | 29.64 |
| HORVU2Hr1G108130.1 | Barley | cytosol | 18.04 | 29.11 |
| Zm00001d032401_P001 | Maize | extracellular | 29.02 | 28.91 |
| HORVU5Hr1G018110.1 | Barley | cytosol | 19.61 | 28.25 |
| EER91340 | Sorghum | extracellular, golgi | 30.59 | 28.16 |
| CDY12405 | Canola | plasma membrane | 32.16 | 27.99 |
| HORVU4Hr1G085990.1 | Barley | extracellular, mitochondrion, plasma membrane | 31.76 | 27.0 |
| CDY10852 | Canola | plasma membrane | 31.76 | 21.32 |
| CDY41240 | Canola | extracellular, plasma membrane | 30.59 | 20.53 |
| CDY15079 | Canola | cytosol, plasma membrane, plastid | 21.57 | 16.22 |
| CDY10860 | Canola | endoplasmic reticulum, plasma membrane | 16.08 | 14.49 |
| CDY39159 | Canola | plasma membrane | 34.12 | 14.45 |
Protein Annotations
| EnsemblPlants:CDY57408 | EnsemblPlantsGene:GSBRNA2T00020948001 | Gene3D:3.30.430.20 | InterPro:GNK2 | InterPro:GNK2_sf | InterPro:IPR002902 |
| InterPro:IPR038408 | PANTHER:PTHR32411 | PANTHER:PTHR32411:SF42 | PFAM:PF01657 | PFscan:PS51473 | ProteinID:CDY57408 |
| ProteinID:CDY57408.1 | SEG:seg | SignalP:SignalP-noTM | UniParc:UPI0004EDC72C | UniProt:A0A078J4H4 | MapMan:35.1 |
Description
BnaA05g36230DBnaA05g36230D protein [Source:UniProtKB/TrEMBL;Acc:A0A078J4H4]
Coordinates
chrLK033572:-:45305..46514
Molecular Weight (calculated)
27800.0 Da
IEP (calculated)
8.646
GRAVY (calculated)
-0.237
Length
255 amino acids
Sequence
(BLAST)
(BLAST)
001: MSSSSSSKRS VSLSLLALAI QLLFIHSVLS QSQDNAFLYH KCSDIEGNFT SRSPYESNLN SLFPRLSYSV PSSGFAALST GNKPDNVNGL GLCRGDASPS
101: DCRTCLATAI PELRKRCPNN KAGIIWYDNC LVKYSSTNFF GKIDYENRFY LYNVNNVSSP ASFNTQTKAI LTDLTKKATA GGHQKLFATG EKSLGEKKLY
201: GLVQCTRDLR SESCKACLDG IIGELPNCCD GKEGGRVVGG SCNVRYEIYP FVKIV
101: DCRTCLATAI PELRKRCPNN KAGIIWYDNC LVKYSSTNFF GKIDYENRFY LYNVNNVSSP ASFNTQTKAI LTDLTKKATA GGHQKLFATG EKSLGEKKLY
201: GLVQCTRDLR SESCKACLDG IIGELPNCCD GKEGGRVVGG SCNVRYEIYP FVKIV
001: MSSLKRIVWF PILAIAIQIL SIHTVLSQSQ NNAFLFHKCS DIEGSFTSKS LYESNLNNLF SQLSYKVPST GFAASSTGNT PNNVNGLALC RGDASSSDCR
101: SCLETAIPEL RQRCPNNKAG IVWYDNCLVK YSSTNFFGKI DFENRFYLYN VKNVSDPSTF NSQTKALLTE LTKKATTRDN QKLFATGEKN IGKNKLYGLV
201: QCTRDLKSIT CKACLNGIIG ELPNCCDGKE GGRVVGGSCN FRYEIYPFVK TA
101: SCLETAIPEL RQRCPNNKAG IVWYDNCLVK YSSTNFFGKI DFENRFYLYN VKNVSDPSTF NSQTKALLTE LTKKATTRDN QKLFATGEKN IGKNKLYGLV
201: QCTRDLKSIT CKACLNGIIG ELPNCCDGKE GGRVVGGSCN FRYEIYPFVK TA
Arabidopsis Description
CRRSP38Cysteine-rich repeat secretory protein 38 [Source:UniProtKB/Swiss-Prot;Acc:Q9LRJ9]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.