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Wine grape
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Wine grape
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane, vacuole

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 5
  • vacuole 6
  • plasma membrane 7
  • golgi 5
  • plastid 2
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane, vacuole
Any Predictor:mitochondrion, plastid, secretory
BaCelLo:secretory
ChloroP:plastid
EpiLoc:mitochondrion
iPSORT:secretory
MultiLoc:vacuole
Plant-mPloc:plasma membrane
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
VIT_12s0059g02590.t01 Wine grape extracellular 18.65 23.97
VIT_12s0059g02580.t01 Wine grape extracellular 18.33 23.65
VIT_12s0059g02620.t01 Wine grape extracellular, plasma membrane 18.97 23.41
VIT_10s0092g00670.t01 Wine grape endoplasmic reticulum, extracellular 18.01 19.79
VIT_07s0141g00930.t01 Wine grape extracellular 16.08 19.08
VIT_07s0141g00840.t01 Wine grape extracellular 16.08 18.38
VIT_07s0141g00870.t01 Wine grape cytosol 7.4 15.23
VIT_12s0059g02600.t01 Wine grape extracellular 18.65 14.95
VIT_00s0262g00090.t01 Wine grape mitochondrion, plasma membrane 20.26 14.89
VIT_00s0409g00020.t01 Wine grape plasma membrane 22.19 14.81
VIT_02s0087g01010.t01 Wine grape plasma membrane 18.01 12.56
VIT_00s0262g00130.t01 Wine grape endoplasmic reticulum 19.61 10.61
Protein Annotations
EntrezGene:100853470wikigene:100853470Gene3D:3.30.430.20MapMan:35.1ProteinID:CCB56555ProteinID:CCB56555.1
UniProt:F6HPC7EMBL:FN596002InterPro:GNK2InterPro:GNK2_sfGO:GO:0005575GO:GO:0016020
GO:GO:0016021InterPro:IPR002902InterPro:IPR038408EntrezGene:LOC100853470wikigene:LOC100853470PFAM:PF01657
PFscan:PS51473PANTHER:PTHR32080PANTHER:PTHR32080:SF5SignalP:SignalP-noTMTMHMM:TMhelixUniParc:UPI0002108B24
ArrayExpress:VIT_01s0026g02270EnsemblPlantsGene:VIT_01s0026g02270EnsemblPlants:VIT_01s0026g02270.t01unigene:Vvi.12032RefSeq:XP_003631293RefSeq:XP_003631293.1
SEG:seg:::::
Description
No Description!
Coordinates
chr1:+:11737796..11739079
Molecular Weight (calculated)
33787.6 Da
IEP (calculated)
7.580
GRAVY (calculated)
0.141
Length
311 amino acids
Sequence
(BLAST)
001: MASLLSSQLL IFSLFCLSAA SSPPSLLALN CSSPSLQRPP LQSLFSNLTS QVAKTRFIDS TNMMGFHGLI MQCRLDLSPT RCIICAQNAV RTVSTLCPYS
101: NSGTAWFDGC YLQYHHRFSP EDFVTSTNIS CSSQIHVLDQ VQFELALETL FLRLRAEINL ATHHQFSSGK LTYGNHSKVY GLAECVRFMS PEECEACVAE
201: GIERLHKYCG GKDGGTVVAG NCVVRFEVYQ FFSYIDAGGS ETGGGTDDVG TRITEGGGSM SFKAKVALAW GVVVACLIGI VLSAWLMRRS VVNTAKVATF
301: GYGDDKIGRR S
Best Arabidopsis Sequence Match ( AT3G22060.1 )
(BLAST)
001: MSSLKRIVWF PILAIAIQIL SIHTVLSQSQ NNAFLFHKCS DIEGSFTSKS LYESNLNNLF SQLSYKVPST GFAASSTGNT PNNVNGLALC RGDASSSDCR
101: SCLETAIPEL RQRCPNNKAG IVWYDNCLVK YSSTNFFGKI DFENRFYLYN VKNVSDPSTF NSQTKALLTE LTKKATTRDN QKLFATGEKN IGKNKLYGLV
201: QCTRDLKSIT CKACLNGIIG ELPNCCDGKE GGRVVGGSCN FRYEIYPFVK TA
Arabidopsis Description
CRRSP38Cysteine-rich repeat secretory protein 38 [Source:UniProtKB/Swiss-Prot;Acc:Q9LRJ9]
SUBAcon: [extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.