Factsheet for Os08t0136800-01

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 7
endoplasmic reticulum 6
vacuole 5
plasma membrane 6
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

extracellular: 19038476
extracellular: 19226311
extracellular: 19253284
extracellular: 26194822

msms PMID: 19253284 doi

ST Kim, YH Kang, Y Wang, J Wu, ZY Park, R Rakwal, GK Agrawal, SY Lee, KY Kang

Environmental Biotechnology National Core Research Center, Gyeongsang National University, Chinju, Korea.

msms PMID: 26194822 doi

WK Cho, TK Hyun, D Kumar, Y Rim, XY Chen, Y Jo, S Kim, KW Lee, ZY Park, WJ Lucas, JY Kim

Department of Industrial Plant Science and Technology, College of Agricultural, Life and Environmental Sciences, Chungbuk National University, Cheongju 361-763, Korea., Department of Life Science, Gwangju Institute of Science and Technology, Gwangju 500-712, Korea., Department of Plant Biology, University of California, Davis, CA 95616, USA., Division of Applied Life Science (BK21plus), Plant Molecular Biology and Biotechnology Research Center, Gyeongsang National University, Jinju 660-701, Korea.

msms PMID: 19226311 doi

WK Cho, XY Chen, H Chu, Y Rim, S Kim, ST Kim, SW Kim, ZY Park, JY Kim

Division of Applied Life Science (BK21 Program), Graduate School, Environmental Biotechnology National Core Research Center, PMBBRC, Gyeongsang National University, Jinju, Korea.

msms PMID: 19038476 doi

XY Chen, ST Kim, WK Cho, Y Rim, S Kim, SW Kim, KY Kang, ZY Park, JY Kim

Division of Applied Life Science (BK21 Program), Gyeongsang National University, Jinju 660-701, Republic of Korea.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os08t0136700-01	Rice	extracellular	85.14	85.77
Os08t0136300-01	Rice	extracellular	82.61	82.91
Os08t0136500-01	Rice	endoplasmic reticulum, vacuole	72.1	71.07
Os03t0277600-01	Rice	extracellular	58.7	61.13
Zm00001d028651_P001	Maize	extracellular	58.7	60.45
EER92464	Sorghum	endoplasmic reticulum, extracellular	59.06	59.06
Os03t0277700-01	Rice	extracellular	56.52	58.87
TraesCS4B01G205300.1	Wheat	extracellular	55.8	58.78
Os03t0312300-01	Rice	golgi	38.41	57.3
HORVU4Hr1G059150.3	Barley	extracellular	54.35	56.82
TraesCS4A01G099000.1	Wheat	extracellular	55.07	56.3
TraesCS4D01G206200.1	Wheat	extracellular	55.07	56.3
GSMUA_Achr10P...	Banana	extracellular	46.01	49.42
GSMUA_Achr10P...	Banana	extracellular	45.29	48.64
GSMUA_Achr10P...	Banana	extracellular	42.39	45.7
VIT_07s0141g00930.t01	Wine grape	extracellular	35.87	37.79
Bra037480.1-P	Field mustard	extracellular	35.14	37.16
CDX86299	Canola	extracellular	35.14	37.16
CDX85345	Canola	plasma membrane	35.14	37.16
VIT_07s0141g00840.t01	Wine grape	extracellular	36.59	37.13
VIT_07s0141g00870.t01	Wine grape	cytosol	20.29	37.09
KRG99540	Soybean	extracellular	34.06	36.58
AT5G48540.1	Thale cress	extracellular	34.78	36.5
Solyc09g057960.1.1	Tomato	extracellular, nucleus	33.7	35.63
PGSC0003DMT400091649	Potato	extracellular	34.06	35.47
Os05t0112800-01	Rice	extracellular	34.42	34.93
Os03t0564600-01	Rice	extracellular	21.01	23.58
Os07t0537300-00	Rice	extracellular	21.01	20.14
Os07t0537200-01	Rice	plasma membrane	19.93	18.9
Os10t0329900-00	Rice	endoplasmic reticulum, plasma membrane	25.0	17.08
Os07t0540600-00	Rice	endoplasmic reticulum, plasma membrane	22.1	16.31

Protein Annotations

Gene3D:3.30.430.20	MapMan:35.1	EntrezGene:4344619	EMBL:AK063306	ProteinID:BAD03070.1	ProteinID:BAF22866.1
ProteinID:BAT03747.1	ProteinID:EAZ41446.1	InterPro:GNK2	InterPro:GNK2_sf	EMBL:GQ848064	InterPro:IPR002902
InterPro:IPR038408	EnsemblPlantsGene:Os08g0136800	EnsemblPlants:Os08t0136800-01	PFAM:PF01657	PFscan:PS51473	PANTHER:PTHR32411
PANTHER:PTHR32411:SF43	UniProt:Q6ZJX3	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI0000225FDF	RefSeq:XP_015649882.1
SEG:seg	:	:	:	:	:

Description

Protein of unknown function DUF26 domain containing protein. (Os08t0136800-01)

Coordinates

chr8:+:2066433..2067718

Molecular Weight (calculated)

30047.7 Da

IEP (calculated)

7.966

GRAVY (calculated)

-0.076

Length

276 amino acids

Sequence
(BLAST)

001: MAALSQLVLV AVVSLVALLP LGMAATTYDP IGSFCSETWM NYGDLNSSEA VTRRRAVNFV VSDLVAKART GGGFATSKAG RGSEVFYGLA QCRGDVSGGD
101: CDACLAQAAK QMVSNCNYTS DSRIWYEYCF MRYYSSYNFI GDVDTREDAS VTLRRWPDMD NPKAFQKVVG KAMVKATTQA VSVGGNGLGR AKEQYTPFVS
201: VYALAQCTRD LAPPACAQCL SSTVSKFDKA CGAAQGCQID YSSCWARYEI YPFYFPLEAN GRATIDMNKY TKVTMH

Best Arabidopsis Sequence Match ( AT5G48540.1 )
(BLAST)

001: MKTLVVKCFL LLALVCSCRA ADSIWQLCNT NSNISASSQV SKNIDSLLAT LVSKTPSKGF KTTTSSSYNN KEKVYGLAQC RGDISNTDCS TCIQDAAKKI
101: REVCQNQSDS RILYDFCFLR YSQENFIGKL DTGAGLIYFN VANVTEIDPK KFDNELGALF DKIRSEAVLP KNKGLGKGKT KLTPFVTLNG LVQCTRDLSE
201: LDCAQCFATA VGSFMTTCHN KKGCRVLYSS CYVRYEFYPF YFPLDPAKTG PSVGRISSVH LSP

Arabidopsis Description

CRRSP55Cysteine-rich repeat secretory protein 55 [Source:UniProtKB/Swiss-Prot;Acc:Q9LV60]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.