Subcellular Localization
min:
: max
Winner_takes_all: cytosol, peroxisome, plastid
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 1
- plasma membrane 1
- mitochondrion 1
- plastid 1
- peroxisome 1
Predictors | GFP | MS/MS | Papers |
---|---|---|---|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
Zm00001d035646_P001 | Maize | endoplasmic reticulum, extracellular | 70.53 | 78.6 |
Os05t0112800-01 | Rice | extracellular | 59.93 | 66.54 |
TraesCS1D01G037000.1 | Wheat | endoplasmic reticulum, vacuole | 56.62 | 62.18 |
TraesCS1A01G035600.1 | Wheat | endoplasmic reticulum, plasma membrane | 55.3 | 61.4 |
TraesCS1B01G045300.1 | Wheat | endoplasmic reticulum, extracellular | 54.97 | 61.03 |
TraesCS1D01G036900.1 | Wheat | plastid | 56.95 | 57.53 |
GSMUA_Achr10P... | Banana | extracellular | 41.06 | 48.44 |
GSMUA_Achr10P... | Banana | extracellular | 37.09 | 43.58 |
GSMUA_Achr10P... | Banana | extracellular | 37.09 | 43.58 |
EER92464 | Sorghum | endoplasmic reticulum, extracellular | 37.42 | 40.94 |
CDX85345 | Canola | plasma membrane | 33.77 | 39.08 |
CDX86299 | Canola | extracellular | 33.44 | 38.7 |
Bra037480.1-P | Field mustard | extracellular | 33.44 | 38.7 |
AT5G48540.1 | Thale cress | extracellular | 32.45 | 37.26 |
VIT_07s0141g00930.t01 | Wine grape | extracellular | 32.12 | 37.02 |
PGSC0003DMT400091649 | Potato | extracellular | 31.13 | 35.47 |
Solyc09g057960.1.1 | Tomato | extracellular, nucleus | 30.46 | 35.25 |
KRG99540 | Soybean | extracellular | 29.14 | 34.24 |
VIT_07s0141g00870.t01 | Wine grape | cytosol | 16.89 | 33.77 |
VIT_07s0141g00840.t01 | Wine grape | extracellular | 29.47 | 32.72 |
EER91340 | Sorghum | extracellular, golgi | 22.85 | 24.91 |
Protein Annotations
Gene3D:3.30.430.20 | MapMan:35.1 | EntrezGene:8067335 | UniProt:C5YYK3 | EnsemblPlants:EES18898 | ProteinID:EES18898 |
ProteinID:EES18898.1 | InterPro:GNK2 | InterPro:GNK2_sf | InterPro:IPR002902 | InterPro:IPR038408 | PFAM:PF01657 |
PFscan:PS51473 | PANTHER:PTHR32411 | PANTHER:PTHR32411:SF44 | EnsemblPlantsGene:SORBI_3009G014700 | unigene:Sbi.5750 | UniParc:UPI0001A88A17 |
RefSeq:XP_002440468.1 | SEG:seg | : | : | : | : |
Description
hypothetical protein
Coordinates
chr9:-:1274578..1275782
Molecular Weight (calculated)
31955.4 Da
IEP (calculated)
4.630
GRAVY (calculated)
-0.075
Length
302 amino acids
Sequence
(BLAST)
(BLAST)
001: MCMQPNKPID SPEQEEDDDE STTTSAPQPT KTSMAPSSTV LLAAAVVALT LAPRPSLAVD PVSTYCAKNF TGGQTQASIS SVLATLVPRA STAYYATAMA
101: GTGGSTIWGL AQCRGDISSS DCARCLAAAA RQVASSCRGQ ADARVWYDYC FLRYDDADFV GLPDTGHTLI LINTMNATGD LAAFDRAERS LMARVAETAG
201: DPASAGLARK TAKFGSEGTT IYGLGWCTRD IAAADCGLCV AQAVAELPNY CRFRRGCRVL YSSCMARYET YPFFFPVTGD DDDVAAASSH AGEYETVILN
301: HK
101: GTGGSTIWGL AQCRGDISSS DCARCLAAAA RQVASSCRGQ ADARVWYDYC FLRYDDADFV GLPDTGHTLI LINTMNATGD LAAFDRAERS LMARVAETAG
201: DPASAGLARK TAKFGSEGTT IYGLGWCTRD IAAADCGLCV AQAVAELPNY CRFRRGCRVL YSSCMARYET YPFFFPVTGD DDDVAAASSH AGEYETVILN
301: HK
001: MKTLVVKCFL LLALVCSCRA ADSIWQLCNT NSNISASSQV SKNIDSLLAT LVSKTPSKGF KTTTSSSYNN KEKVYGLAQC RGDISNTDCS TCIQDAAKKI
101: REVCQNQSDS RILYDFCFLR YSQENFIGKL DTGAGLIYFN VANVTEIDPK KFDNELGALF DKIRSEAVLP KNKGLGKGKT KLTPFVTLNG LVQCTRDLSE
201: LDCAQCFATA VGSFMTTCHN KKGCRVLYSS CYVRYEFYPF YFPLDPAKTG PSVGRISSVH LSP
101: REVCQNQSDS RILYDFCFLR YSQENFIGKL DTGAGLIYFN VANVTEIDPK KFDNELGALF DKIRSEAVLP KNKGLGKGKT KLTPFVTLNG LVQCTRDLSE
201: LDCAQCFATA VGSFMTTCHN KKGCRVLYSS CYVRYEFYPF YFPLDPAKTG PSVGRISSVH LSP
Arabidopsis Description
CRRSP55Cysteine-rich repeat secretory protein 55 [Source:UniProtKB/Swiss-Prot;Acc:Q9LV60]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.