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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol, peroxisome, plastid

Predictor Summary:
  • nucleus 1
  • cytosol 1
  • plasma membrane 1
  • mitochondrion 1
  • plastid 1
  • peroxisome 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d035646_P001 Maize endoplasmic reticulum, extracellular 70.53 78.6
Os05t0112800-01 Rice extracellular 59.93 66.54
TraesCS1D01G037000.1 Wheat endoplasmic reticulum, vacuole 56.62 62.18
TraesCS1A01G035600.1 Wheat endoplasmic reticulum, plasma membrane 55.3 61.4
TraesCS1B01G045300.1 Wheat endoplasmic reticulum, extracellular 54.97 61.03
TraesCS1D01G036900.1 Wheat plastid 56.95 57.53
GSMUA_Achr10P... Banana extracellular 41.06 48.44
GSMUA_Achr10P... Banana extracellular 37.09 43.58
GSMUA_Achr10P... Banana extracellular 37.09 43.58
EER92464 Sorghum endoplasmic reticulum, extracellular 37.42 40.94
CDX85345 Canola plasma membrane 33.77 39.08
CDX86299 Canola extracellular 33.44 38.7
Bra037480.1-P Field mustard extracellular 33.44 38.7
AT5G48540.1 Thale cress extracellular 32.45 37.26
VIT_07s0141g00930.t01 Wine grape extracellular 32.12 37.02
PGSC0003DMT400091649 Potato extracellular 31.13 35.47
Solyc09g057960.1.1 Tomato extracellular, nucleus 30.46 35.25
KRG99540 Soybean extracellular 29.14 34.24
VIT_07s0141g00870.t01 Wine grape cytosol 16.89 33.77
VIT_07s0141g00840.t01 Wine grape extracellular 29.47 32.72
EER91340 Sorghum extracellular, golgi 22.85 24.91
Protein Annotations
Gene3D:3.30.430.20MapMan:35.1EntrezGene:8067335UniProt:C5YYK3EnsemblPlants:EES18898ProteinID:EES18898
ProteinID:EES18898.1InterPro:GNK2InterPro:GNK2_sfInterPro:IPR002902InterPro:IPR038408PFAM:PF01657
PFscan:PS51473PANTHER:PTHR32411PANTHER:PTHR32411:SF44EnsemblPlantsGene:SORBI_3009G014700unigene:Sbi.5750UniParc:UPI0001A88A17
RefSeq:XP_002440468.1SEG:seg::::
Description
hypothetical protein
Coordinates
chr9:-:1274578..1275782
Molecular Weight (calculated)
31955.4 Da
IEP (calculated)
4.630
GRAVY (calculated)
-0.075
Length
302 amino acids
Sequence
(BLAST)
001: MCMQPNKPID SPEQEEDDDE STTTSAPQPT KTSMAPSSTV LLAAAVVALT LAPRPSLAVD PVSTYCAKNF TGGQTQASIS SVLATLVPRA STAYYATAMA
101: GTGGSTIWGL AQCRGDISSS DCARCLAAAA RQVASSCRGQ ADARVWYDYC FLRYDDADFV GLPDTGHTLI LINTMNATGD LAAFDRAERS LMARVAETAG
201: DPASAGLARK TAKFGSEGTT IYGLGWCTRD IAAADCGLCV AQAVAELPNY CRFRRGCRVL YSSCMARYET YPFFFPVTGD DDDVAAASSH AGEYETVILN
301: HK
Best Arabidopsis Sequence Match ( AT5G48540.1 )
(BLAST)
001: MKTLVVKCFL LLALVCSCRA ADSIWQLCNT NSNISASSQV SKNIDSLLAT LVSKTPSKGF KTTTSSSYNN KEKVYGLAQC RGDISNTDCS TCIQDAAKKI
101: REVCQNQSDS RILYDFCFLR YSQENFIGKL DTGAGLIYFN VANVTEIDPK KFDNELGALF DKIRSEAVLP KNKGLGKGKT KLTPFVTLNG LVQCTRDLSE
201: LDCAQCFATA VGSFMTTCHN KKGCRVLYSS CYVRYEFYPF YFPLDPAKTG PSVGRISSVH LSP
Arabidopsis Description
CRRSP55Cysteine-rich repeat secretory protein 55 [Source:UniProtKB/Swiss-Prot;Acc:Q9LV60]
SUBAcon: [extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.