Factsheet for Os07t0130100-01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 5
endoplasmic reticulum 5
vacuole 5
plasma membrane 8
golgi 5
cytosol 2
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	secretory
EpiLoc:	cytosol
iPSORT:	secretory
MultiLoc:	plasma membrane
Plant-mPloc:	cytosol, nucleus
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

plasma membrane: 18260611
plasma membrane: 27800704

msms PMID: 27800704 doi

J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu

Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.

msms PMID: 18260611 doi

SH Natera, KL Ford, AM Cassin, JH Patterson, EJ Newbigin, A Bacic

Plant Cell Biology Research Centre, VIC, Australia. s.natera@unimelb.edu.au

PPI

Inferred distinct locusB in Crop

locusB	locations
Os01t0267900-01
Os01t0279300-01
Os01t0810300-01
Os03t0319300-01
Os03t0743500-02
Os05t0491000-01
Os05t0491100-01
Os07t0687200-02
Os12t0603800-00

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G02410.1	Os01t0267900-01	AT2G41090.1	17360592
AT4G02410.1	Os01t0279300-01	AT2G41090.1	17360592
AT4G02410.1	Os01t0810300-01	AT2G41090.1	17360592
AT4G02410.1	Os03t0319300-01	AT2G41090.1	17360592
AT4G02410.1	Os05t0491000-01	AT2G41090.1	17360592
AT4G02410.1	Os05t0491100-01	AT2G41090.1	17360592
AT4G02410.1	Os07t0687200-02	AT2G41090.1	17360592
AT4G02410.1	Os12t0603800-00	AT2G41090.1	17360592
AT4G02410.1	Os01t0267900-01	AT2G41100.1	17360592
AT4G02410.1	Os01t0279300-01	AT2G41100.1	17360592
AT4G02410.1	Os01t0810300-01	AT2G41100.1	17360592
AT4G02410.1	Os03t0319300-01	AT2G41100.1	17360592
AT4G02410.1	Os05t0491000-01	AT2G41100.1	17360592
AT4G02410.1	Os05t0491100-01	AT2G41100.1	17360592
AT4G02410.1	Os07t0687200-02	AT2G41100.1	17360592
AT4G02410.1	Os12t0603800-00	AT2G41100.1	17360592
AT4G02410.1	Os03t0743500-02	AT4G14640.1	17360592
AT4G02410.1	Os01t0267900-01	AT5G21274.1	17360592
AT4G02410.1	Os01t0279300-01	AT5G21274.1	17360592
AT4G02410.1	Os01t0810300-01	AT5G21274.1	17360592
AT4G02410.1	Os03t0319300-01	AT5G21274.1	17360592
AT4G02410.1	Os05t0491000-01	AT5G21274.1	17360592
AT4G02410.1	Os05t0491100-01	AT5G21274.1	17360592
AT4G02410.1	Os07t0687200-02	AT5G21274.1	17360592
AT4G02410.1	Os12t0603800-00	AT5G21274.1	17360592

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os07t0283125-00	Rice	plasma membrane	61.23	62.33
Os04t0531400-01	Rice	plasma membrane	57.71	61.79
Os03t0772600-01	Rice	plasma membrane	42.44	61.49
Os09t0268000-00	Rice	plasma membrane	60.21	61.38
Os07t0130200-01	Rice	plasma membrane	61.53	60.9
Os07t0283050-00	Rice	plasma membrane	58.59	59.64
Os07t0575600-02	Rice	plasma membrane	59.91	58.54
Os07t0130400-01	Rice	plasma membrane	59.62	58.5
Os02t0640500-01	Rice	plasma membrane	56.83	57.42
Os10t0442000-01	Rice	plasma membrane	59.47	57.28
Os07t0131500-00	Rice	plasma membrane	53.3	57.08
Os07t0130800-01	Rice	plasma membrane	57.42	55.86
Os10t0441900-01	Rice	plasma membrane	55.95	55.14
Os04t0531500-01	Rice	plasma membrane	59.32	54.89
KRH00016	Soybean	plasma membrane	53.3	54.42
KRH49145	Soybean	plasma membrane	53.16	54.27
CDX91325	Canola	cytosol, mitochondrion	21.0	54.17
PGSC0003DMT400022983	Potato	plasma membrane	52.42	53.68
VIT_08s0007g00810.t01	Wine grape	plasma membrane	53.45	53.53
Solyc09g011990.1.1	Tomato	plasma membrane	52.42	53.44
Bra005168.1-P	Field mustard	plasma membrane	51.84	52.45
CDX91384	Canola	plasma membrane	51.54	52.15
PGSC0003DMT400022743	Potato	plasma membrane	51.1	52.1
AT2G37710.1	Thale cress	plasma membrane	51.54	52.0
CDY65835	Canola	plasma membrane	50.22	51.9
Os09t0268100-00	Rice	plasma membrane	36.86	51.86
PGSC0003DMT400052365	Potato	plasma membrane	50.66	51.8
AT3G53810.1	Thale cress	plasma membrane	51.4	51.7
Solyc09g012000.1.1	Tomato	plasma membrane	50.37	51.27
CDY21254	Canola	plasma membrane	48.9	51.15
AT4G02410.1	Thale cress	plasma membrane	50.07	50.59
AT4G02420.1	Thale cress	plasma membrane	49.63	50.52
CDX90939	Canola	plasma membrane	48.6	50.08
CDY02414	Canola	plasma membrane	43.02	49.66
Bra035326.1-P	Field mustard	plasma membrane	48.9	49.63
Bra018553.1-P	Field mustard	plasma membrane	48.6	49.63
Bra000881.1-P	Field mustard	plasma membrane	48.9	49.33
CDY55369	Canola	plasma membrane	48.16	48.96
Os02t0298200-01	Rice	plasma membrane	42.29	48.73
Os07t0129800-00	Rice	plasma membrane, vacuole	60.21	48.41
Os02t0299000-00	Rice	mitochondrion	42.0	48.39
Os03t0823000-01	Rice	plasma membrane	48.31	46.93
Os07t0575750-00	Rice	plasma membrane	47.58	46.82
Bra000880.1-P	Field mustard	plasma membrane	46.4	46.54
Os12t0574700-00	Rice	plasma membrane	46.7	46.36
Os10t0533800-00	Rice	plasma membrane	44.05	42.98
Solyc09g011060.2.1	Tomato	plasma membrane	51.4	42.07
Os07t0131375-00	Rice	plasma membrane	34.07	38.54
GSMUA_Achr9P09920_001	Banana	plasma membrane	41.41	29.75
GSMUA_Achr9P10000_001	Banana	cytosol	44.05	15.65
Os07t0575700-01	Rice	plasma membrane	7.93	8.05
Os07t0129900-00	Rice	plasma membrane	0.59	0.61

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.19	Gene3D:2.60.120.200	Gene3D:3.30.200.20	EMBL:AK069990	ProteinID:BAC57687.1
ProteinID:BAC84734.1	ProteinID:BAF20734.1	ProteinID:BAS99920.1	InterPro:ConA-like_dom_sf	ProteinID:EAZ38578.1	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575
GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020
GO:GO:0016021	GO:GO:0016301	GO:GO:0016310	GO:GO:0016740	GO:GO:0019538	GO:GO:0030246
InterPro:IPR000719	InterPro:Kinase-like_dom_sf	InterPro:Lectin_legB_Mn/Ca_BS	InterPro:Legume_lectin_dom	EnsemblPlantsGene:Os07g0130100	EnsemblPlants:Os07t0130100-01
PFAM:PF00069	PFAM:PF00139	ScanProsite:PS00107	ScanProsite:PS00108	ScanProsite:PS00307	PFscan:PS50011
PANTHER:PTHR27007	PANTHER:PTHR27007:SF134	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	UniProt:Q84ZI4	SMART:SM00220
SUPFAM:SSF49899	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI000000455D
SEG:seg	:	:	:	:	:

Description

Similar to Resistance protein candidate (Fragment). (Os07t0130100-01)

Coordinates

chr7:-:1590912..1593270

Molecular Weight (calculated)

74396.9 Da

IEP (calculated)

7.745

GRAVY (calculated)

0.019

Length

681 amino acids

Sequence
(BLAST)

001: MSFMLLLLLL LSLILNLASP TTAASGDGNG DQFIYSGFHG SNLTVDGAAS ITPDGLLQLT DGAAYLKGHA FHPSPVRLRR DVSTSTTTTT VRSFSVTFVF
101: GIVSVYPDFS AHGMAFVVSP TTNLSSSLPA KYLGLTNVQN DGNASNHMLA VELDTIQSVE FRDINANHVG VDINGLQSVR AYNAGYYDDV SGEFRSLKLI
201: SRQAMQVWVD YHGGEKKQLD VTMAPLRMAR PVKPLLSVTH DLSTVLADVV YLGFSAATGR VNSRHCVLGW SLGINGPAPA IDIDKLPKLP RAEPKPRSRV
301: LEIVLPIVTA TIVLVVGGAI VMVVRRRSRY AELREDWEVE FGPHRFSYKE LFRATDGFAD KHLLGSGGFG KVYRGVLPKS KLEVAVKKVS HESRQGMKEF
401: VAEIVSIGRI RHRNLVQLLG YCRRKGELLL VYAYIPNGSL DKYLYSEEDK PILSWAQRFR IIKGIASGLL YLHERWEKVV VHRDIKAGNI LLDKDMNGQL
501: GDFGLARLYD HGTDSQTTHV VGTMGYLAPE LIRTGKASPL TDVFAFGVFL LEVTCGQKPI KEKNPQGSHI ALVDWVLEHW RDGSLMDTVD GRLHGEYDAG
601: EAALVLKLGL LCSHPFAAAR PGMGQVTCCL AGEAPLPELT PADMGFDVLA MMQDKGFDTS VVSYPDLMTS FGTISSLSGG R

Best Arabidopsis Sequence Match ( AT3G53810.1 )
(BLAST)

001: MFVKLKLIFF FFLLCQIMIS SSQNLNFTYN GFHPPLTDIS LQGLATVTPN GLLKLTNTSV QKTGHAFCTE RIRFKDSQNG NVSSFSTTFV FAIHSQIPTL
101: SGHGIAFVVA PTLGLPFALP SQYIGLFNIS NNGNDTNHIF AVEFDTIQSS EFGDPNDNHV GIDLNGLRSA NYSTAGYRDD HDKFQNLSLI SRKRIQVWID
201: YDNRSHRIDV TVAPFDSDKP RKPLVSYVRD LSSILLEDMY VGFSSATGSV LSEHFLVGWS FRLNGEAPML SLSKLPKLPR FEPRRISEFY KIGMPLISLS
301: LIFSIIFLAF YIVRRKKKYE EELDDWETEF GKNRFRFKEL YHATKGFKEK DLLGSGGFGR VYRGILPTTK LEVAVKRVSH DSKQGMKEFV AEIVSIGRMS
401: HRNLVPLLGY CRRRGELLLV YDYMPNGSLD KYLYNNPETT LDWKQRSTII KGVASGLFYL HEEWEQVVIH RDVKASNVLL DADFNGRLGD FGLARLYDHG
501: SDPQTTHVVG TLGYLAPEHS RTGRATTTTD VYAFGAFLLE VVSGRRPIEF HSASDDTFLL VEWVFSLWLR GNIMEAKDPK LGSSGYDLEE VEMVLKLGLL
601: CSHSDPRARP SMRQVLQYLR GDMALPELTP LDLSAGSVMN LGGRDGFSGI AMTDFSTVFK GFTGGSSIAD SLLSGGR

Arabidopsis Description

LECRK42L-type lectin-domain containing receptor kinase IV.2 [Source:UniProtKB/Swiss-Prot;Acc:Q9M345]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.