Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc10g081170.1.1 | Tomato | extracellular | 99.33 | 99.33 |
| VIT_08s0040g00470.t01 | Wine grape | cytosol | 99.33 | 99.33 |
| AT3G56800.1 | Thale cress | cytosol | 98.66 | 98.66 |
| Bra002368.1-P | Field mustard | cytosol | 98.66 | 98.66 |
| Bra006595.1-P | Field mustard | cytosol | 98.66 | 98.66 |
| Os01t0267900-01 | Rice | cytosol | 98.66 | 98.66 |
| Os03t0319300-01 | Rice | cytosol, extracellular, nucleus | 98.66 | 98.66 |
| Os07t0687200-02 | Rice | cytosol | 98.66 | 98.66 |
| PGSC0003DMT400018569 | Potato | cytosol | 98.66 | 98.66 |
| PGSC0003DMT400070437 | Potato | cytosol | 98.66 | 98.66 |
| Solyc10g077010.1.1 | Tomato | cytosol | 98.66 | 98.66 |
| Solyc11g072240.1.1 | Tomato | cytosol | 98.66 | 98.66 |
| Solyc12g099990.1.1 | Tomato | nucleus | 98.66 | 98.66 |
| CDX92401 | Canola | cytosol | 88.59 | 98.51 |
| GSMUA_Achr5P27590_001 | Banana | cytosol | 76.51 | 98.28 |
| GSMUA_Achr10P... | Banana | cytosol, plasma membrane | 97.99 | 97.99 |
| GSMUA_Achr3P09330_001 | Banana | cytosol | 97.99 | 97.99 |
| GSMUA_Achr5P07820_001 | Banana | cytosol | 97.99 | 97.99 |
| GSMUA_Achr6P23670_001 | Banana | cytosol | 97.99 | 97.99 |
| KRG94975 | Soybean | nucleus | 97.99 | 97.99 |
| PGSC0003DMT400058435 | Potato | cytosol | 97.99 | 97.99 |
| Solyc01g008950.2.1 | Tomato | nucleus | 97.99 | 97.99 |
| PGSC0003DMT400046278 | Potato | cytosol | 50.34 | 97.4 |
| GSMUA_Achr10P... | Banana | cytosol | 97.32 | 97.32 |
| GSMUA_Achr2P01120_001 | Banana | cytosol | 97.32 | 97.32 |
| GSMUA_Achr3P25040_001 | Banana | cytosol | 97.32 | 97.32 |
| GSMUA_Achr6P15990_001 | Banana | cytosol | 97.32 | 97.32 |
| GSMUA_Achr9P17280_001 | Banana | cytosol | 97.32 | 97.32 |
| Os01t0279300-01 | Rice | cytosol, plasma membrane, plastid | 97.32 | 97.32 |
| Os05t0491100-01 | Rice | cytosol, extracellular | 97.32 | 97.32 |
| GSMUA_Achr11P... | Banana | cytosol | 66.44 | 97.06 |
| Zm00001d008278_P001 | Maize | cytosol | 82.55 | 96.85 |
| VIT_06s0009g01910.t01 | Wine grape | cytosol | 99.33 | 96.73 |
| PGSC0003DMT400054299 | Potato | cytosol | 72.48 | 95.58 |
| TraesCS1A01G308800.1 | Wheat | cytosol | 83.89 | 95.42 |
| AT2G41110.2 | Thale cress | cytosol | 98.66 | 91.3 |
| AT1G66410.2 | Thale cress | cytosol | 96.64 | 90.57 |
| KRH18664 | Soybean | cytosol | 83.89 | 89.29 |
| TraesCS3A01G184500.1 | Wheat | cytosol | 97.99 | 89.02 |
| TraesCS3D01G188600.1 | Wheat | cytosol | 98.66 | 88.02 |
| Zm00001d038545_P001 | Maize | cytosol, mitochondrion | 85.91 | 85.91 |
| Zm00001d047597_P001 | Maize | cytosol | 83.89 | 85.03 |
| PGSC0003DMT400014123 | Potato | mitochondrion | 69.13 | 84.43 |
| TraesCS2B01G113800.2 | Wheat | cytosol | 98.66 | 84.0 |
| TraesCS3B01G219900.1 | Wheat | cytosol | 96.64 | 82.76 |
| AT5G37780.3 | Thale cress | cytosol | 96.64 | 82.29 |
| AT2G27030.3 | Thale cress | cytosol | 98.66 | 81.22 |
| TraesCS3A01G191900.1 | Wheat | cytosol | 82.55 | 77.36 |
| TraesCS3D01G194500.2 | Wheat | cytosol | 82.55 | 77.36 |
| TraesCS3A01G335000.1 | Wheat | cytosol | 93.29 | 76.37 |
| TraesCS3D01G328300.1 | Wheat | cytosol | 93.29 | 76.37 |
| KRG89812 | Soybean | cytosol, mitochondrion | 83.89 | 75.76 |
| Zm00001d038543_P004 | Maize | plastid | 85.91 | 75.74 |
| HORVU3Hr1G079210.4 | Barley | cytosol | 93.29 | 75.54 |
| TraesCS3B01G365900.1 | Wheat | cytosol | 91.95 | 74.86 |
| HORVU3Hr1G038010.1 | Barley | cytosol, plastid | 98.66 | 73.87 |
| PGSC0003DMT400097662 | Potato | cytosol, mitochondrion | 84.56 | 72.83 |
| AT4G14640.1 | Thale cress | cytosol | 71.81 | 70.86 |
| EES01631 | Sorghum | cytosol | 86.58 | 70.11 |
| AT3G43810.2 | Thale cress | cytosol | 98.66 | 68.69 |
| HORVU2Hr1G016740.4 | Barley | cytosol | 98.66 | 68.37 |
| Zm00001d043144_P001 | Maize | plasma membrane | 83.22 | 67.76 |
| Os01t0810300-01 | Rice | plasma membrane | 83.89 | 66.84 |
| Zm00001d028948_P001 | Maize | cytosol | 87.25 | 65.99 |
| AT3G22930.1 | Thale cress | cytosol | 73.83 | 63.58 |
| GSMUA_Achr10P... | Banana | cytosol | 78.52 | 61.9 |
| GSMUA_Achr10P... | Banana | cytosol | 77.85 | 61.7 |
| EES09201 | Sorghum | cytosol | 74.5 | 61.67 |
| TraesCS5B01G137100.1 | Wheat | cytosol | 74.5 | 61.67 |
| TraesCS5D01G068100.1 | Wheat | cytosol | 67.11 | 61.35 |
| HORVU5Hr1G044710.4 | Barley | cytosol | 73.83 | 61.11 |
| TraesCS5A01G139700.1 | Wheat | cytosol | 73.83 | 61.11 |
| TraesCS5D01G153400.1 | Wheat | cytosol | 73.83 | 61.11 |
| Zm00001d041430_P001 | Maize | cytosol | 69.13 | 60.95 |
| TraesCS5A01G057100.1 | Wheat | cytosol | 67.11 | 60.61 |
| EES16322 | Sorghum | cytosol | 71.14 | 60.23 |
| TraesCS5A01G057200.1 | Wheat | cytosol | 65.77 | 60.12 |
| Os12t0603800-00 | Rice | cytosol | 66.44 | 59.64 |
| TraesCS5D01G068000.1 | Wheat | cytosol | 67.11 | 59.52 |
| Zm00001d052415_P001 | Maize | cytosol | 63.09 | 59.49 |
| Zm00001d005003_P002 | Maize | cytosol | 71.81 | 59.44 |
| HORVU5Hr1G014070.2 | Barley | cytosol | 65.77 | 59.04 |
| TraesCS5B01G059900.1 | Wheat | cytosol | 66.44 | 58.93 |
| AT1G12310.1 | Thale cress | cytosol | 49.66 | 50.0 |
| AT1G62820.1 | Thale cress | cytosol | 48.99 | 49.32 |
| AT2G41090.1 | Thale cress | cytosol | 62.42 | 48.69 |
| HORVU5Hr1G014060.1 | Barley | cytosol, plastid | 66.44 | 46.26 |
| Os05t0491000-01 | Rice | cytosol | 47.65 | 45.81 |
| TraesCS1D01G308000.1 | Wheat | cytosol | 44.97 | 44.67 |
| HORVU0Hr1G001280.1 | Barley | cytosol | 44.97 | 44.37 |
| TraesCS1A01G308700.1 | Wheat | cytosol | 44.97 | 44.08 |
| TraesCS1B01G319300.1 | Wheat | cytosol | 44.3 | 44.0 |
| TraesCS4B01G131100.1 | Wheat | cytosol | 67.79 | 43.72 |
| TraesCS4D01G126100.1 | Wheat | cytosol | 69.13 | 42.74 |
| HORVU4Hr1G026290.3 | Barley | cytosol, plastid | 63.09 | 42.53 |
| Zm00001d010649_P001 | Maize | extracellular | 40.27 | 42.25 |
| OQU78227 | Sorghum | cytosol | 47.65 | 39.66 |
| AT3G50360.1 | Thale cress | cytosol | 44.97 | 39.65 |
| AT3G03000.1 | Thale cress | cytosol | 43.62 | 39.39 |
| AT1G32250.1 | Thale cress | cytosol | 43.62 | 39.16 |
| AT4G37010.2 | Thale cress | cytosol, mitochondrion | 40.94 | 35.67 |
| AT1G18530.1 | Thale cress | cytosol | 37.58 | 35.67 |
| AT3G25600.1 | Thale cress | cytosol | 36.91 | 34.16 |
| GSMUA_Achr8P05790_001 | Banana | cytosol | 46.31 | 28.16 |
| AT2G41100.1 | Thale cress | cytosol | 59.06 | 27.16 |
Protein Annotations
| Gene3D:1.10.238.10 | MapMan:35.1 | EntrezGene:832245 | UniProt:A0A178UHI2 | ProteinID:AAO73886.1 | ProteinID:AED92947.1 |
| ArrayExpress:AT5G21274 | EnsemblPlantsGene:AT5G21274 | RefSeq:AT5G21274 | TAIR:AT5G21274 | RefSeq:AT5G21274-TAIR-G | EnsemblPlants:AT5G21274.1 |
| TAIR:AT5G21274.1 | EMBL:AY050350 | EMBL:AY094037 | Unigene:At.21106 | Symbol:CAM6 | InterPro:EF-hand-dom_pair |
| InterPro:EF_Hand_1_Ca_BS | InterPro:EF_hand_dom | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005509 | GO:GO:0005515 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008150 |
| GO:GO:0009987 | GO:GO:0019722 | GO:GO:0046872 | InterPro:IPR002048 | RefSeq:NP_850860.1 | ProteinID:OAO93119.1 |
| PFAM:PF13499 | PO:PO:0000005 | PO:PO:0000293 | PO:PO:0009025 | ScanProsite:PS00018 | PFscan:PS50222 |
| PANTHER:PTHR23050 | PANTHER:PTHR23050:SF250 | UniProt:Q03509 | SMART:SM00054 | SUPFAM:SSF47473 | UniParc:UPI00000561F9 |
| EMBL:Z12024 | : | : | : | : | : |
Description
CAM6CAM6 [Source:UniProtKB/TrEMBL;Acc:A0A178UHI2]
Coordinates
chr5:-:7214474..7216052
Molecular Weight (calculated)
16834.6 Da
IEP (calculated)
3.876
GRAVY (calculated)
-0.620
Length
149 amino acids
Sequence
(BLAST)
(BLAST)
001: MADQLTDDQI SEFKEAFSLF DKDGDGCITT KELGTVMRSL GQNPTEAELQ DMINEVDADG NGTIDFPEFL NLMARKMKDT DSEEELKEAF RVFDKDQNGF
101: ISAAELRHVM TNLGEKLSDE EVDEMIREAD VDGDGQINYE EFVKVMMAK
101: ISAAELRHVM TNLGEKLSDE EVDEMIREAD VDGDGQINYE EFVKVMMAK
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.