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Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • endoplasmic reticulum 1
  • golgi 1
  • extracellular 1
  • cytosol 2
  • mitochondrion 2
  • nucleus 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra023786.1-P Field mustard cytosol 84.39 93.59
CDY34215 Canola cytosol 84.39 93.59
CDX92965 Canola cytosol 82.66 92.86
Bra033898.1-P Field mustard cytosol 82.66 92.26
Bra001892.1-P Field mustard cytosol 82.08 92.21
CDX94883 Canola cytosol 58.96 91.89
CDY10686 Canola cytosol 82.08 91.61
CDY10325 Canola cytosol 57.8 88.5
AT4G14640.1 Thale cress cytosol 74.57 85.43
KRH31638 Soybean cytosol 72.25 83.33
VIT_05s0020g04420.t01 Wine grape cytosol 71.68 83.22
KRH69070 Soybean cytosol 71.1 82.0
PGSC0003DMT400042062 Potato cytosol 71.1 82.0
Solyc06g053930.2.1 Tomato cytosol 69.94 81.21
CDY40824 Canola cytosol 83.81 80.56
GSMUA_Achr4P22570_001 Banana cytosol 67.63 79.05
GSMUA_Achr7P01390_001 Banana cytosol 67.05 78.38
GSMUA_Achr2P12680_001 Banana cytosol 67.05 78.38
GSMUA_Achr1P27230_001 Banana cytosol 66.47 77.7
GSMUA_Achr1P04700_001 Banana cytosol 65.32 76.35
GSMUA_Achr6P24410_001 Banana cytosol 65.32 75.84
AT3G56800.1 Thale cress cytosol 64.74 75.17
AT5G21274.1 Thale cress cytosol 63.58 73.83
GSMUA_Achr5P09010_001 Banana cytosol 63.01 73.65
AT1G66410.2 Thale cress cytosol 64.16 69.81
AT2G41110.2 Thale cress cytosol 64.74 69.57
PGSC0003DMT400034833 Potato cytosol 58.96 66.67
Os03t0743500-02 Rice nucleus 58.38 65.58
Solyc03g005240.1.1 Tomato cytosol 57.8 65.36
KXG37587 Sorghum cytosol 56.65 63.64
AT5G37780.3 Thale cress cytosol 64.16 63.43
AT2G27030.3 Thale cress cytosol 64.74 61.88
AT3G43810.2 Thale cress cytosol 64.74 52.34
Zm00001d033980_P001 Maize cytosol 46.82 51.59
TraesCS5A01G382800.2 Wheat plastid 53.76 49.73
GSMUA_Achr3P25390_001 Banana cytosol 52.6 49.73
GSMUA_Achr1P14070_001 Banana cytosol 57.23 43.81
AT1G62820.1 Thale cress cytosol 35.26 41.22
AT2G41090.1 Thale cress cytosol 44.51 40.31
AT3G50360.1 Thale cress cytosol 39.31 40.24
AT1G12310.1 Thale cress cytosol 34.1 39.86
AT3G03000.1 Thale cress cytosol 37.57 39.39
AT1G18530.1 Thale cress cytosol 33.53 36.94
AT1G32250.1 Thale cress cytosol 34.68 36.14
AT4G37010.2 Thale cress cytosol, mitochondrion 34.1 34.5
AT3G25600.1 Thale cress cytosol 30.64 32.92
AT2G41100.1 Thale cress cytosol 45.09 24.07
KXG37588 Sorghum mitochondrion, nucleus 0.58 0.73
Protein Annotations
Gene3D:1.10.238.10MapMan:35.1EntrezGene:821865ProteinID:AEE76692.1EMBL:AF428309ArrayExpress:AT3G22930
EnsemblPlantsGene:AT3G22930RefSeq:AT3G22930TAIR:AT3G22930RefSeq:AT3G22930-TAIR-GEnsemblPlants:AT3G22930.1TAIR:AT3G22930.1
EMBL:AY116967Unigene:At.26260ProteinID:BAB03038.1Symbol:CML11ncoils:CoilInterPro:EF-hand-dom_pair
InterPro:EF_Hand_1_Ca_BSInterPro:EF_hand_domGO:GO:0003674GO:GO:0005488GO:GO:0005509GO:GO:0008150
GO:GO:0046872InterPro:IPR002048RefSeq:NP_188933.1PFAM:PF13499PO:PO:0000005PO:PO:0000293
PO:PO:0007064PO:PO:0007095PO:PO:0007103PO:PO:0007115PO:PO:0007123PO:PO:0009005
PO:PO:0009025PO:PO:0009047PO:PO:0020038PO:PO:0020100PO:PO:0025022ScanProsite:PS00018
PFscan:PS50222PANTHER:PTHR23050PANTHER:PTHR23050:SF336UniProt:Q9LIK5SMART:SM00054SUPFAM:SSF47473
UniParc:UPI00000A506CSEG:seg::::
Description
CML11Calmodulin-like protein 11 [Source:UniProtKB/Swiss-Prot;Acc:Q9LIK5]
Coordinates
chr3:-:8124020..8125931
Molecular Weight (calculated)
20072.1 Da
IEP (calculated)
3.611
GRAVY (calculated)
-0.916
Length
173 amino acids
Sequence
(BLAST)
001: MEEIQQQQQQ QQQQQQQQQQ QQQQQQELTQ EQIMEFKEAF CLFDKDGDGC ITADELATVI RSLDQNPTEQ ELQDMITEID SDGNGTIEFS EFLNLMANQL
101: QETDADEELK EAFKVFDKDQ NGYISASELR HVMINLGEKL TDEEVDQMIK EADLDGDGQV NYDEFVRMMM ING
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.