Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX83123 | Canola | golgi | 88.76 | 78.53 |
| KRH10567 | Soybean | endoplasmic reticulum | 78.7 | 78.24 |
| Solyc02g090810.2.1 | Tomato | cytosol, mitochondrion | 76.33 | 76.79 |
| PGSC0003DMT400010295 | Potato | cytosol, mitochondrion | 76.33 | 76.79 |
| VIT_05s0094g01240.t01 | Wine grape | cytosol | 74.56 | 76.36 |
| CDY62753 | Canola | cytosol | 89.94 | 76.0 |
| Solyc04g026350.2.1 | Tomato | cytosol | 77.51 | 75.72 |
| TraesCS2D01G173900.1 | Wheat | cytosol, mitochondrion | 73.96 | 74.4 |
| TraesCS2B01G192400.1 | Wheat | cytosol, mitochondrion | 73.96 | 74.4 |
| TraesCS2A01G166500.1 | Wheat | cytosol, mitochondrion | 73.96 | 74.4 |
| KRH43884 | Soybean | cytosol | 57.4 | 74.05 |
| HORVU2Hr1G030640.1 | Barley | cytosol | 73.96 | 73.96 |
| Zm00001d022160_P003 | Maize | cytosol, mitochondrion | 71.6 | 70.35 |
| GSMUA_Achr6P10140_001 | Banana | cytosol | 66.86 | 69.33 |
| KRG98826 | Soybean | cytosol | 63.31 | 68.15 |
| KRG98823 | Soybean | cytosol | 61.54 | 66.24 |
| KXG36700 | Sorghum | cytosol | 66.86 | 65.7 |
| AT4G37010.2 | Thale cress | cytosol, mitochondrion | 65.09 | 64.33 |
| Zm00001d014271_P001 | Maize | cytosol | 65.09 | 61.45 |
| Os07t0618800-01 | Rice | plasma membrane | 75.15 | 60.77 |
| VIT_07s0031g00700.t01 | Wine grape | cytosol | 72.19 | 60.4 |
| TraesCS7B01G412100.1 | Wheat | cytosol | 64.5 | 60.22 |
| HORVU7Hr1G113200.1 | Barley | cytosol | 63.91 | 59.67 |
| Os10t0389000-01 | Rice | plasma membrane | 66.27 | 58.64 |
| AT3G56800.1 | Thale cress | cytosol | 40.24 | 45.64 |
| AT5G21274.1 | Thale cress | cytosol | 39.65 | 44.97 |
| AT4G14640.1 | Thale cress | cytosol | 38.46 | 43.05 |
| AT1G66410.2 | Thale cress | cytosol | 40.24 | 42.77 |
| AT2G41110.2 | Thale cress | cytosol | 40.24 | 42.24 |
| AT3G22930.1 | Thale cress | cytosol | 40.24 | 39.31 |
| AT5G37780.3 | Thale cress | cytosol | 40.24 | 38.86 |
| AT2G27030.3 | Thale cress | cytosol | 40.24 | 37.57 |
| AT3G43810.2 | Thale cress | cytosol | 40.24 | 31.78 |
| AT1G62820.1 | Thale cress | cytosol | 26.63 | 30.41 |
| AT1G12310.1 | Thale cress | cytosol | 26.04 | 29.73 |
| AT1G32250.1 | Thale cress | cytosol | 28.99 | 29.52 |
| AT1G18530.1 | Thale cress | cytosol | 27.22 | 29.3 |
| AT2G41090.1 | Thale cress | cytosol | 32.54 | 28.8 |
| AT3G03000.1 | Thale cress | cytosol | 27.81 | 28.48 |
| AT3G25600.1 | Thale cress | cytosol | 25.44 | 26.71 |
| AT2G41100.1 | Thale cress | cytosol | 30.77 | 16.05 |
Protein Annotations
| Gene3D:1.10.238.10 | MapMan:14.6.1.1 | MapMan:16.11.2.3 | EntrezGene:824198 | UniProt:A0A178VE83 | ProteinID:AEE78658.1 |
| EMBL:AJ009672 | EMBL:AK175359 | EMBL:AK175375 | EMBL:AK176828 | EMBL:AK176882 | ArrayExpress:AT3G50360 |
| EnsemblPlantsGene:AT3G50360 | RefSeq:AT3G50360 | TAIR:AT3G50360 | RefSeq:AT3G50360-TAIR-G | EnsemblPlants:AT3G50360.1 | TAIR:AT3G50360.1 |
| Symbol:ATCEN2 | EMBL:BT025522 | ProteinID:CAB62315.1 | InterPro:EF-hand-dom_pair | InterPro:EF_Hand_1_Ca_BS | InterPro:EF_hand_dom |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005509 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005886 | GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008150 |
| GO:GO:0009719 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0046872 | GO:GO:1901527 | InterPro:IPR002048 |
| RefSeq:NP_190605.1 | UniProt:O82659 | ProteinID:OAP04186.1 | PFAM:PF13499 | PO:PO:0000005 | PO:PO:0000013 |
| PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001016 | PO:PO:0001017 | PO:PO:0001054 |
| PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 |
| PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 |
| PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 |
| PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 |
| PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 |
| PO:PO:0025195 | PO:PO:0025281 | ScanProsite:PS00018 | PFscan:PS50222 | PANTHER:PTHR23050 | PANTHER:PTHR23050:SF167 |
| SMART:SM00054 | SUPFAM:SSF47473 | UniParc:UPI00000A3C31 | : | : | : |
Description
CML20Probable calcium-binding protein CML20 [Source:UniProtKB/Swiss-Prot;Acc:O82659]
Coordinates
chr3:+:18674137..18675761
Molecular Weight (calculated)
19410.0 Da
IEP (calculated)
4.656
GRAVY (calculated)
-0.859
Length
169 amino acids
Sequence
(BLAST)
(BLAST)
001: MSSIYRTVSR KEKPRRHHGL TTQKKQEIKE AFELFDTDGS GTIDAKELNV AMRALGFEMT EEQINKMIAD VDKDGSGAID FDEFVHMMTA KIGERDTKEE
101: LTKAFQIIDL DKNGKISPDD IKRMAKDLGE NFTDAEIREM VEEADRDRDG EVNMDEFMRM MRRTAYGGN
101: LTKAFQIIDL DKNGKISPDD IKRMAKDLGE NFTDAEIREM VEEADRDRDG EVNMDEFMRM MRRTAYGGN
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.