Factsheet for HORVU7Hr1G113200.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
plasma membrane 1
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU1Hr1G029080.1
HORVU1Hr1G071780.21
HORVU2Hr1G025040.2
HORVU3Hr1G087140.16

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G50360.1	HORVU1Hr1G029080.1	AT2G39340.1	19843313
AT3G50360.1	HORVU1Hr1G071780.21	AT2G39340.1	19843313
AT3G50360.1	HORVU3Hr1G087140.16	AT2G39340.1	19843313
AT3G50360.1	HORVU2Hr1G025040.2	AT3G06290.1	19843313

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7B01G412100.1	Wheat	cytosol	95.03	95.03
Zm00001d014271_P001	Maize	cytosol	82.32	83.24
Os10t0389000-01	Rice	plasma membrane	82.32	78.01
HORVU2Hr1G030640.1	Barley	cytosol	61.88	66.27
Solyc02g090810.2.1	Tomato	cytosol, mitochondrion	60.22	64.88
PGSC0003DMT400010295	Potato	cytosol, mitochondrion	60.22	64.88
AT3G50360.1	Thale cress	cytosol	59.67	63.91
GSMUA_Achr6P10140_001	Banana	cytosol	57.46	63.8
VIT_05s0094g01240.t01	Wine grape	cytosol	58.01	63.64
Solyc04g026350.2.1	Tomato	cytosol	60.77	63.58
KRH10567	Soybean	endoplasmic reticulum	58.56	62.35
CDX75623	Canola	extracellular	59.67	60.0
AT4G37010.2	Thale cress	cytosol, mitochondrion	55.8	59.06
KRH43884	Soybean	cytosol	41.44	57.25
CDX83123	Canola	golgi	59.67	56.54
CDY62753	Canola	cytosol	60.77	55.0
VIT_07s0031g00700.t01	Wine grape	cytosol	60.22	53.96
KRG98826	Soybean	cytosol	45.86	52.87
KRG98823	Soybean	cytosol	44.75	51.59
HORVU3Hr1G079210.4	Barley	cytosol	37.02	36.41
HORVU5Hr1G014070.2	Barley	cytosol	33.15	36.14
HORVU5Hr1G044710.4	Barley	cytosol	35.91	36.11
HORVU3Hr1G038010.1	Barley	cytosol, plastid	39.23	35.68
HORVU2Hr1G016740.4	Barley	cytosol	39.23	33.02
HORVU5Hr1G014060.1	Barley	cytosol, plastid	34.25	28.97
HORVU0Hr1G001280.1	Barley	cytosol	23.76	28.48
HORVU4Hr1G026290.3	Barley	cytosol, plastid	29.83	24.43
HORVU7Hr1G075240.1	Barley	cytosol, plastid	24.86	23.08
HORVU3Hr1G052770.1	Barley	cytosol	28.73	21.05
HORVU1Hr1G080000.3	Barley	cytosol	19.89	19.25
HORVU1Hr1G050720.2	Barley	cytosol	20.44	14.18

Protein Annotations

EnsemblPlants:HORVU7Hr1G113200.1	EnsemblPlantsGene:HORVU7Hr1G113200	Gene3D:1.10.238.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0005509
InterPro:EF-hand-dom_pair	InterPro:EF_Hand_1_Ca_BS	InterPro:EF_hand_dom	InterPro:IPR002048	PANTHER:PTHR23050	PANTHER:PTHR23050:SF167
PFAM:PF13499	PFscan:PS50222	ScanProsite:PS00018	SEG:seg	SMART:SM00054	SUPFAM:SSF47473
UniParc:UPI000295807D	UniProt:M0Z827	MapMan:14.6.1.1	MapMan:16.11.2.3	:	:

Description

No Description!

Coordinates

chrchr7H:-:636546785..636548514

Molecular Weight (calculated)

20606.3 Da

IEP (calculated)

4.483

GRAVY (calculated)

-0.791

Length

181 amino acids

Sequence
(BLAST)

001: MASYFRGQRL EPSSDAPRPG YRRDRGGRKR LTAQKRKEIK EAFDLFDTDG SGTIDPRELN VAMRALGFEM TPEQIQQMIA EVDKDGSGTI DLDEFIHMMT
101: DKMGERDARD ELHKAFRIID QDANGKISDM DIQRLAIEAG EHFTLDEVRE MIEAADENGD GEVDMEEFMK MMKRTGFGAG F

Best Arabidopsis Sequence Match ( AT3G50360.1 )
(BLAST)

001: MSSIYRTVSR KEKPRRHHGL TTQKKQEIKE AFELFDTDGS GTIDAKELNV AMRALGFEMT EEQINKMIAD VDKDGSGAID FDEFVHMMTA KIGERDTKEE
101: LTKAFQIIDL DKNGKISPDD IKRMAKDLGE NFTDAEIREM VEEADRDRDG EVNMDEFMRM MRRTAYGGN

Arabidopsis Description

CML20Probable calcium-binding protein CML20 [Source:UniProtKB/Swiss-Prot;Acc:O82659]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.