CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY10325	Canola	cytosol	90.99	89.38
CDX92965	Canola	cytosol	95.5	68.83
Bra023786.1-P	Field mustard	cytosol	96.4	68.59
CDY34215	Canola	cytosol	96.4	68.59
CDY10686	Canola	cytosol	91.89	65.81
CDY40824	Canola	cytosol	96.4	59.44
AT3G22930.1	Thale cress	cytosol	91.89	58.96
CDX92401	Canola	cytosol	71.17	58.96
VIT_05s0020g04420.t01	Wine grape	cytosol	76.58	57.05
KRH31638	Soybean	cytosol	75.68	56.0
KRH69070	Soybean	cytosol	74.77	55.33
GSMUA_Achr1P27230_001	Banana	cytosol	72.97	54.73
Solyc06g053930.2.1	Tomato	cytosol	72.97	54.36
PGSC0003DMT400042062	Potato	cytosol	72.97	54.0
GSMUA_Achr6P24410_001	Banana	cytosol	72.07	53.69
CDY06478	Canola	cytosol	72.97	53.64
GSMUA_Achr5P09010_001	Banana	cytosol	71.17	53.38
GSMUA_Achr1P04700_001	Banana	cytosol	71.17	53.38
CDY04474	Canola	cytosol	71.17	53.02
CDX99690	Canola	cytosol	71.17	53.02
CDY55678	Canola	cytosol	71.17	53.02
CDY56411	Canola	cytosol	71.17	53.02
CDY65072	Canola	cytosol	71.17	53.02
CDX96148	Canola	cytosol	71.17	53.02
GSMUA_Achr7P01390_001	Banana	cytosol	70.27	52.7
GSMUA_Achr2P12680_001	Banana	cytosol	70.27	52.7
GSMUA_Achr4P22570_001	Banana	cytosol	70.27	52.7
CDY27651	Canola	cytosol	70.27	52.0
CDY12321	Canola	cytosol	67.57	51.72
Solyc03g005240.1.1	Tomato	cytosol	61.26	44.44
PGSC0003DMT400034833	Potato	cytosol	61.26	44.44
CDY48191	Canola	cytosol	71.17	44.13
CDX77060	Canola	cytosol	71.17	43.89
Os03t0743500-02	Rice	nucleus	57.66	41.56
KXG37587	Sorghum	cytosol	55.86	40.26
CDX75970	Canola	cytosol	39.64	38.6
CDY30947	Canola	cytosol	71.17	37.8
CDY57144	Canola	cytosol	49.55	37.67
GSMUA_Achr3P25390_001	Banana	cytosol	60.36	36.61
CDY21220	Canola	cytosol	70.27	35.29
GSMUA_Achr1P14070_001	Banana	cytosol	65.77	32.3
TraesCS5A01G382800.2	Wheat	plastid	49.55	29.41
Zm00001d033980_P001	Maize	cytosol	41.44	29.3
CDY21044	Canola	cytosol	36.94	27.7
CDY30070	Canola	cytosol	36.04	27.03
CDY31259	Canola	cytosol	36.04	27.03
CDX98074	Canola	cytosol	36.04	27.03
CDY15991	Canola	cytosol	35.14	26.35
CDY26556	Canola	cytosol	35.14	26.35
CDX83123	Canola	golgi	44.14	25.65
CDY62753	Canola	cytosol	45.05	25.0
CDY58544	Canola	cytosol	37.84	24.85
CDX75623	Canola	extracellular	38.74	23.89
CDY04172	Canola	cytosol	34.23	23.6
CDY59874	Canola	cytosol	34.23	23.6
CDY26151	Canola	cytosol	33.33	23.57
CDY48076	Canola	cytosol	34.23	23.46
CDY51605	Canola	cytosol	34.23	23.46
CDY19221	Canola	cytosol	32.43	22.93
CDY21702	Canola	cytosol	31.53	22.44
CDX81878	Canola	cytosol	31.53	22.44
CDY61824	Canola	cytosol	33.33	22.29
CDY54677	Canola	cytosol	33.33	22.29
KXG37588	Sorghum	mitochondrion, nucleus	0.9	0.73

Protein Annotations

Gene3D:1.10.238.10	MapMan:35.1	GO:A0A078E635	EnsemblPlants:CDX94883	ProteinID:CDX94883	ProteinID:CDX94883.1
InterPro:EF-hand-dom_pair	InterPro:EF_Hand_1_Ca_BS	InterPro:EF_hand_dom	GO:GO:0003674	GO:GO:0005488	GO:GO:0005509
EnsemblPlantsGene:GSBRNA2T00158434001	InterPro:IPR002048	PFAM:PF13202	PFAM:PF13499	ScanProsite:PS00018	PFscan:PS50222
PANTHER:PTHR23050	PANTHER:PTHR23050:SF336	SMART:SM00054	SUPFAM:SSF47473	UniParc:UPI0004EDC72F	SEG:seg

Description

BnaC03g43050D

Coordinates

chrLK031885:+:1249548..1250112

Molecular Weight (calculated)

12678.6 Da

IEP (calculated)

3.659

GRAVY (calculated)

-0.603

Length

111 amino acids

Sequence
(BLAST)

001: MDQTQQQELT QEQIMEFKEA FCLFDKDGDG CITADELATV IRSLDQNPTE QELQDMINEI DSDGNGTIEF SEFLNLMANK IQETDADEEL KEAFKVFDKD
101: QNGYISAIRV V

Best Arabidopsis Sequence Match ( AT3G22930.2 )
(BLAST)

001: MEEIQQQQQQ QQQQQQQQQQ QQQQQQELTQ EQIMEFKEAF CLFDKDGDGC ITADELATVI RSLDQNPTEQ ELQDMITEID SDGNGTIEFS EFLNLMANQL
101: QETDADEELK EAFKVFDKDQ NGYISASEVS K

Arabidopsis Description

CML11Calmodulin-like protein 11 [Source:UniProtKB/Swiss-Prot;Acc:Q9LIK5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.