Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra004166.1-P | Field mustard | cytosol | 99.33 | 99.33 |
| CDX96148 | Canola | cytosol | 99.33 | 99.33 |
| CDY27651 | Canola | cytosol | 98.66 | 98.0 |
| CDX99690 | Canola | cytosol | 97.99 | 97.99 |
| GSMUA_Achr3P25040_001 | Banana | cytosol | 97.99 | 97.99 |
| Os05t0491100-01 | Rice | cytosol, extracellular | 97.99 | 97.99 |
| CDY04474 | Canola | cytosol | 97.32 | 97.32 |
| CDY56411 | Canola | cytosol | 97.32 | 97.32 |
| GSMUA_Achr6P23670_001 | Banana | cytosol | 97.32 | 97.32 |
| KRG94975 | Soybean | nucleus | 97.32 | 97.32 |
| Solyc10g081170.1.1 | Tomato | extracellular | 97.32 | 97.32 |
| VIT_08s0040g00470.t01 | Wine grape | cytosol | 97.32 | 97.32 |
| GSMUA_Achr10P... | Banana | cytosol | 96.64 | 96.64 |
| GSMUA_Achr2P01120_001 | Banana | cytosol | 96.64 | 96.64 |
| GSMUA_Achr6P15990_001 | Banana | cytosol | 96.64 | 96.64 |
| Os01t0267900-01 | Rice | cytosol | 96.64 | 96.64 |
| Os03t0319300-01 | Rice | cytosol, extracellular, nucleus | 96.64 | 96.64 |
| Os07t0687200-02 | Rice | cytosol | 96.64 | 96.64 |
| PGSC0003DMT400018569 | Potato | cytosol | 96.64 | 96.64 |
| PGSC0003DMT400070437 | Potato | cytosol | 96.64 | 96.64 |
| Solyc10g077010.1.1 | Tomato | cytosol | 96.64 | 96.64 |
| Solyc11g072240.1.1 | Tomato | cytosol | 96.64 | 96.64 |
| Solyc12g099990.1.1 | Tomato | nucleus | 96.64 | 96.64 |
| GSMUA_Achr11P... | Banana | cytosol | 65.77 | 96.08 |
| CDY65072 | Canola | cytosol | 95.97 | 95.97 |
| GSMUA_Achr10P... | Banana | cytosol, plasma membrane | 95.97 | 95.97 |
| GSMUA_Achr3P09330_001 | Banana | cytosol | 95.97 | 95.97 |
| GSMUA_Achr5P07820_001 | Banana | cytosol | 95.97 | 95.97 |
| PGSC0003DMT400058435 | Potato | cytosol | 95.97 | 95.97 |
| Solyc01g008950.2.1 | Tomato | nucleus | 95.97 | 95.97 |
| CDX92401 | Canola | cytosol | 85.91 | 95.52 |
| GSMUA_Achr9P17280_001 | Banana | cytosol | 95.3 | 95.3 |
| Os01t0279300-01 | Rice | cytosol, plasma membrane, plastid | 95.3 | 95.3 |
| Zm00001d008278_P001 | Maize | cytosol | 81.21 | 95.28 |
| GSMUA_Achr5P27590_001 | Banana | cytosol | 73.83 | 94.83 |
| PGSC0003DMT400046278 | Potato | cytosol | 48.99 | 94.81 |
| VIT_06s0009g01910.t01 | Wine grape | cytosol | 97.32 | 94.77 |
| CDY12321 | Canola | cytosol | 91.95 | 94.48 |
| TraesCS1A01G308800.1 | Wheat | cytosol | 82.55 | 93.89 |
| PGSC0003DMT400054299 | Potato | cytosol | 71.14 | 93.81 |
| AT1G66410.2 | Thale cress | cytosol | 98.66 | 92.45 |
| KRH18664 | Soybean | cytosol | 82.55 | 87.86 |
| TraesCS3A01G184500.1 | Wheat | cytosol | 95.97 | 87.2 |
| TraesCS3D01G188600.1 | Wheat | cytosol | 96.64 | 86.23 |
| Zm00001d038545_P001 | Maize | cytosol, mitochondrion | 84.56 | 84.56 |
| Zm00001d047597_P001 | Maize | cytosol | 82.55 | 83.67 |
| PGSC0003DMT400014123 | Potato | mitochondrion | 68.46 | 83.61 |
| CDX75970 | Canola | cytosol | 63.76 | 83.33 |
| TraesCS2B01G113800.2 | Wheat | cytosol | 96.64 | 82.29 |
| TraesCS3B01G219900.1 | Wheat | cytosol | 95.97 | 82.18 |
| CDY48191 | Canola | cytosol | 97.32 | 81.01 |
| CDX77060 | Canola | cytosol | 97.32 | 80.56 |
| TraesCS3A01G191900.1 | Wheat | cytosol | 82.55 | 77.36 |
| TraesCS3D01G194500.2 | Wheat | cytosol | 82.55 | 77.36 |
| TraesCS3A01G335000.1 | Wheat | cytosol | 92.62 | 75.82 |
| TraesCS3D01G328300.1 | Wheat | cytosol | 92.62 | 75.82 |
| HORVU3Hr1G079210.4 | Barley | cytosol | 92.62 | 75.0 |
| Zm00001d038543_P004 | Maize | plastid | 84.56 | 74.56 |
| TraesCS3B01G365900.1 | Wheat | cytosol | 91.28 | 74.32 |
| KRG89812 | Soybean | cytosol, mitochondrion | 81.21 | 73.33 |
| HORVU3Hr1G038010.1 | Barley | cytosol, plastid | 96.64 | 72.36 |
| PGSC0003DMT400097662 | Potato | cytosol, mitochondrion | 83.89 | 72.25 |
| CDX92965 | Canola | cytosol | 74.5 | 72.08 |
| CDY34215 | Canola | cytosol | 75.17 | 71.79 |
| CDY10686 | Canola | cytosol | 74.5 | 71.61 |
| CDX94883 | Canola | cytosol | 53.02 | 71.17 |
| CDY10325 | Canola | cytosol | 53.02 | 69.91 |
| CDY30947 | Canola | cytosol | 96.64 | 68.9 |
| EES01631 | Sorghum | cytosol | 83.22 | 67.39 |
| Zm00001d043144_P001 | Maize | plasma membrane | 82.55 | 67.21 |
| HORVU2Hr1G016740.4 | Barley | cytosol | 96.64 | 66.98 |
| Os01t0810300-01 | Rice | plasma membrane | 83.89 | 66.84 |
| CDY06478 | Canola | cytosol | 67.11 | 66.23 |
| CDY57144 | Canola | cytosol | 63.76 | 65.07 |
| Zm00001d028948_P001 | Maize | cytosol | 85.91 | 64.97 |
| CDY21220 | Canola | cytosol | 95.97 | 64.71 |
| GSMUA_Achr10P... | Banana | cytosol | 78.52 | 62.23 |
| CDY40824 | Canola | cytosol | 75.17 | 62.22 |
| GSMUA_Achr10P... | Banana | cytosol | 78.52 | 61.9 |
| TraesCS5D01G068100.1 | Wheat | cytosol | 67.11 | 61.35 |
| Zm00001d041430_P001 | Maize | cytosol | 69.13 | 60.95 |
| TraesCS5A01G057100.1 | Wheat | cytosol | 67.11 | 60.61 |
| TraesCS5B01G137100.1 | Wheat | cytosol | 73.15 | 60.56 |
| EES16322 | Sorghum | cytosol | 71.14 | 60.23 |
| TraesCS5A01G057200.1 | Wheat | cytosol | 65.77 | 60.12 |
| EES09201 | Sorghum | cytosol | 72.48 | 60.0 |
| HORVU5Hr1G044710.4 | Barley | cytosol | 72.48 | 60.0 |
| TraesCS5A01G139700.1 | Wheat | cytosol | 72.48 | 60.0 |
| TraesCS5D01G153400.1 | Wheat | cytosol | 72.48 | 60.0 |
| Os12t0603800-00 | Rice | cytosol | 66.44 | 59.64 |
| TraesCS5D01G068000.1 | Wheat | cytosol | 67.11 | 59.52 |
| HORVU5Hr1G014070.2 | Barley | cytosol | 65.77 | 59.04 |
| TraesCS5B01G059900.1 | Wheat | cytosol | 66.44 | 58.93 |
| Zm00001d005003_P002 | Maize | cytosol | 69.8 | 57.78 |
| Zm00001d052415_P001 | Maize | cytosol | 61.07 | 57.59 |
| CDX98074 | Canola | cytosol | 48.32 | 48.65 |
| CDY21044 | Canola | cytosol | 48.32 | 48.65 |
| CDY30070 | Canola | cytosol | 48.32 | 48.65 |
| CDY31259 | Canola | cytosol | 48.32 | 48.65 |
| CDY26556 | Canola | cytosol | 47.65 | 47.97 |
| CDY15991 | Canola | cytosol | 46.98 | 47.3 |
| Os05t0491000-01 | Rice | cytosol | 48.32 | 46.45 |
| HORVU5Hr1G014060.1 | Barley | cytosol, plastid | 66.44 | 46.26 |
| HORVU0Hr1G001280.1 | Barley | cytosol | 45.64 | 45.03 |
| TraesCS1A01G308700.1 | Wheat | cytosol | 45.64 | 44.74 |
| TraesCS1B01G319300.1 | Wheat | cytosol | 44.97 | 44.67 |
| TraesCS1D01G308000.1 | Wheat | cytosol | 44.3 | 44.0 |
| TraesCS4B01G131100.1 | Wheat | cytosol | 66.44 | 42.86 |
| TraesCS4D01G126100.1 | Wheat | cytosol | 67.79 | 41.91 |
| Zm00001d010649_P001 | Maize | extracellular | 39.6 | 41.55 |
| HORVU4Hr1G026290.3 | Barley | cytosol, plastid | 61.07 | 41.18 |
| CDY58544 | Canola | cytosol | 44.97 | 39.65 |
| CDY54677 | Canola | cytosol | 43.62 | 39.16 |
| CDY61824 | Canola | cytosol | 43.62 | 39.16 |
| OQU78227 | Sorghum | cytosol | 46.98 | 39.11 |
| CDY26151 | Canola | cytosol | 38.93 | 36.94 |
| CDX81878 | Canola | cytosol | 38.26 | 36.54 |
| CDY21702 | Canola | cytosol | 38.26 | 36.54 |
| CDY19221 | Canola | cytosol | 38.26 | 36.31 |
| CDX75623 | Canola | extracellular | 43.62 | 36.11 |
| CDY04172 | Canola | cytosol | 38.93 | 36.02 |
| CDY59874 | Canola | cytosol | 38.93 | 36.02 |
| CDY48076 | Canola | cytosol | 38.93 | 35.8 |
| CDY51605 | Canola | cytosol | 38.93 | 35.8 |
| CDX83123 | Canola | golgi | 45.64 | 35.6 |
| CDY62753 | Canola | cytosol | 46.31 | 34.5 |
| GSMUA_Achr8P05790_001 | Banana | cytosol | 46.31 | 28.16 |
Protein Annotations
| EnsemblPlants:CDY55678 | EnsemblPlantsGene:GSBRNA2T00017188001 | Gene3D:1.10.238.10 | GO:A0A078IZ26 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005509 | InterPro:EF-hand-dom_pair | InterPro:EF_Hand_1_Ca_BS | InterPro:EF_hand_dom | InterPro:IPR002048 | PANTHER:PTHR23050 |
| PANTHER:PTHR23050:SF250 | PFAM:PF13499 | PFscan:PS50222 | ProteinID:CDY55678 | ProteinID:CDY55678.1 | ScanProsite:PS00018 |
| SMART:SM00054 | SUPFAM:SSF47473 | UniParc:UPI0004EBC12C | UniProt:A0A078IZ26 | MapMan:35.1 | : |
Description
BnaC06g43530DBnaC06g43530D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IZ26]
Coordinates
chrLK033420:+:25565..26850
Molecular Weight (calculated)
16834.6 Da
IEP (calculated)
3.881
GRAVY (calculated)
-0.615
Length
149 amino acids
Sequence
(BLAST)
(BLAST)
001: MADQLTDEQI SEFKEAFSLF DKDGDGCITT KELGTVMRSL GQNPTEAELQ DMINEVDADG NGTIDFPEFL NLMAKKMKDT DSEEELKEAF RVFDKDQNGF
101: ISAAELRHVM TNLGEKLTDE EVDEMVREAD VDGDGQINYE EFVKIMMAK
101: ISAAELRHVM TNLGEKLTDE EVDEMVREAD VDGDGQINYE EFVKIMMAK
001: MADQLTDEQI SEFKEAFSLF DKDGDGCITT KELGTVMRSL GQNPTEAELQ DMINEVDADG NGTIDFPEFL NLMAKKMKDT DSEEELKEAF RVFDKDQNGF
101: ISAAELRHVM TNLGEKLTDE EVEEMIREAD VDGDGQINYE EFVKIMMAK
101: ISAAELRHVM TNLGEKLTDE EVEEMIREAD VDGDGQINYE EFVKIMMAK
Arabidopsis Description
CAM1Calmodulin 1 [Source:UniProtKB/TrEMBL;Acc:F4K8M2]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.