Factsheet for Os02t0259900-01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus, cytosol

Predictor Summary:

nucleus 3
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
Os01t0267900-01
Os01t0279300-01
Os01t0810300-01
Os03t0319300-01
Os05t0491000-01
Os05t0491100-01
Os07t0687200-02
Os12t0603800-00

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G46240.1	Os01t0267900-01	AT3G56800.1	16003391
AT2G46240.1	Os01t0279300-01	AT3G56800.1	16003391
AT2G46240.1	Os01t0810300-01	AT3G56800.1	16003391
AT2G46240.1	Os03t0319300-01	AT3G56800.1	16003391
AT2G46240.1	Os05t0491000-01	AT3G56800.1	16003391
AT2G46240.1	Os05t0491100-01	AT3G56800.1	16003391
AT2G46240.1	Os07t0687200-02	AT3G56800.1	16003391
AT2G46240.1	Os12t0603800-00	AT3G56800.1	16003391
AT2G46240.1	Os01t0267900-01	AT5G21274.1	16003391
AT2G46240.1	Os01t0279300-01	AT5G21274.1	16003391
AT2G46240.1	Os01t0810300-01	AT5G21274.1	16003391
AT2G46240.1	Os03t0319300-01	AT5G21274.1	16003391
AT2G46240.1	Os05t0491000-01	AT5G21274.1	16003391
AT2G46240.1	Os05t0491100-01	AT5G21274.1	16003391
AT2G46240.1	Os07t0687200-02	AT5G21274.1	16003391
AT2G46240.1	Os12t0603800-00	AT5G21274.1	16003391

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX80000	Canola	nucleus	11.29	9.78
TraesCS4D01G357900.7	Wheat	cytosol	28.67	9.62
Zm00001d016070_P004	Maize	nucleus	27.77	9.43
Bra004553.1-P	Field mustard	nucleus	14.22	9.39
GSMUA_Achr10P...	Banana	nucleus	17.83	9.33
OQU84742	Sorghum	nucleus	28.67	9.22
TraesCS7B01G388700.4	Wheat	nucleus	24.83	8.35
HORVU4Hr1G090660.1	Barley	cytosol	24.61	8.27
TraesCS5A01G548000.4	Wheat	cytosol	24.15	8.16
PGSC0003DMT400000246	Potato	nucleus	15.8	5.65
TraesCS4B01G382700.2	Wheat	cytosol	13.32	5.42
KRH75967	Soybean	nucleus	7.0	5.36
AT2G46240.1	Thale cress	cytosol	11.51	4.89
CDY42022	Canola	nucleus	9.93	4.84
KRH06550	Soybean	nucleus	12.42	4.74
KRH47996	Soybean	cytosol	12.19	4.65
KRH65782	Soybean	cytosol	5.64	4.63
KRH00024	Soybean	nucleus	6.32	4.12
Solyc01g095320.2.1	Tomato	nucleus	7.22	3.29
Zm00001d048489_P001	Maize	cytosol, nucleus, plastid	2.03	3.02
Zm00001d005246_P001	Maize	nucleus	1.81	2.06
Zm00001d045678_P001	Maize	cytosol	2.26	1.53
VIT_15s0046g01560.t01	Wine grape	nucleus	3.84	1.41
Zm00001d046131_P001	Maize	nucleus	0.9	1.34
Os02t0259850-00	Rice	nucleus	0.0	0.0

Protein Annotations

MapMan:35.2	UniProt:A0A0P0VHB7	ProteinID:BAS77981.1	ncoils:Coil	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	GO:GO:0005575	GO:GO:0006457	GO:GO:0008150	GO:GO:0009266	GO:GO:0009506
GO:GO:0009605	GO:GO:0009607	GO:GO:0009628	GO:GO:0009987	GO:GO:0043207	GO:GO:0051087
EnsemblPlantsGene:Os02g0259900	EnsemblPlants:Os02t0259900-01	PANTHER:PTHR33322	PANTHER:PTHR33322:SF4	UniParc:UPI000393AB83	SEG:seg

Description

Conserved hypothetical protein. (Os02t0259900-01)

Coordinates

chr2:+:9021454..9023102

Molecular Weight (calculated)

48088.6 Da

IEP (calculated)

4.024

GRAVY (calculated)

-0.915

Length

443 amino acids

Sequence
(BLAST)

001: EKDVPPVGGQ EIPSGDHMEP LHDEALSENS NELQQCTTSE RSSTMISPAA ADNSMITMAA TSVESSVSAD KVSPVEGQVT EAAVEHAPVE KDQCEEPNTT
101: IVDSGDSSVS LKNEELQDHD QAPSGSSIMS NSAEQPEEAS DVNMQQQVEN VDTTQDATEE SDATPEIGMV DVTYADTENY VQSPLLQTTS KLQSTTGQNV
201: LKEPEAAKQS DVSGEYESVL VGKQNESANN LTGDSAKEEP PLVGLGMEAD THESAPRELK DEPILPETER SELSCEHGDI TGHEDSEMYA PPECETDVQK
301: ESCCVDRRRA DMQVPKEVEC DELGDDNPKE DASVQTENMA SEEASLASAT PDGMKDENKV AEETTSDYAT PYSSKSDNEN KLAEENQKLK EMLQNLLASG
401: SDQMGVITEL SEKVKTLERK LARKKRPKVR VHRPTRQATA KVH

Best Arabidopsis Sequence Match ( AT2G46240.1 )
(BLAST)

0001: MMPVYMDPSQ PCQMRPQEYY YQGFGNNSQH MAMDAPPPCH GSCVHGNFPA YWPPCYPPQV PYHQCCMNRS AFHPPHASYA PSCYVHPPFP VGYQPWFDVE
0101: KDVPGKHHCG KCSSQMCDLK KDRGVVIEEH EPEIEKGEAV LPVRSTNCPY PIIWIPHENA RNQEYRSSLG LGKHNQPPAE VRAPDNMTIQ KSFPESWRGC
0201: FPFDESSMKS LVQNQDSKKA QNGKTVEAPF DISKFKSLLQ GQDMKEAQIQ KNKEELGQLT YPTSWVPSRR KRDDVEASES SNEDRKKMQN GKTVEYPFDI
0301: SMIKSLIQGQ DVKEAQNQKN KEEPGQVPYP IFWIPSYGKR KDVEASESKE SSNEGRNLES CPSDLHRNEG QITQAKGKEG NFECNVLSDA EEKSSVINIP
0401: VANHLQEPRN IPVKLSENHL PKPTEPTKRI AKNEPVKSTK KEQSSSSSEA SKLPPVCLRV DPLPKERNGG SKSVSHPKRM EKSKETKIAA PLSSKKAESR
0501: TVPEACNVKC EDANAEMKMA EGSLNALRTE KGSVESNSNL QEESNGEIIK PCEAKENREQ PAKKSFTEEE AARIIQSMYR GYDVRRWEPI KKLKEIATVR
0601: EQMGDVKKRI EALEASTDQH IEEKEIVVNG ELVMNLLLKL DAVEGLHPSI REFRKALATE LSSIQDKLDS LKNSCASAEK EAVKEQVEIK SQPSDSPVNL
0701: EHSQLTEENK MVSDTNLEKV LRLSPEEHPM SVLNRTDEKQ AESAAETEEG YGLFETLATD SKQATENAAA ASSTTIPEKI GEVETVVPGN PPSADGNGMT
0801: VTNVEENKAM VVESLEEPIN ELPQMVEETE TNSIRDPENA SEVSEAETNS SENENRKGED DIVLHSEKNV ELSELPVGVI DEETQPLSQD PSSSYTREGN
0901: MTAMDPKTAS QEETEVDHSP NNSKGIGQQT SEPQDEKEQS PETEVIVKEQ PLETEVILNE QAPEPEITEP GISKETKKLM EENQRFKETM ETLVKAGREQ
1001: LEVISKLTSR VKSLEKKLSH KKKTQIRRRA SKPMSVSPTD AVL

Arabidopsis Description

BAG6BAG family molecular chaperone regulator 6 [Source:UniProtKB/Swiss-Prot;Acc:O82345]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.