Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4B01G382700.2 | Wheat | cytosol | 64.47 | 78.15 |
| TraesCS7B01G388700.4 | Wheat | nucleus | 74.92 | 75.04 |
| TraesCS5A01G548000.4 | Wheat | cytosol | 63.48 | 63.87 |
| HORVU4Hr1G090660.1 | Barley | cytosol | 60.15 | 60.24 |
| Os02t0259850-00 | Rice | nucleus | 11.36 | 59.76 |
| Zm00001d045678_P001 | Maize | cytosol | 22.65 | 45.72 |
| Zm00001d005246_P001 | Maize | nucleus | 13.26 | 45.1 |
| Zm00001d046131_P001 | Maize | nucleus | 9.17 | 40.6 |
| Zm00001d048489_P001 | Maize | cytosol, nucleus, plastid | 8.71 | 38.59 |
| OQU84742 | Sorghum | nucleus | 36.67 | 35.12 |
| Zm00001d016070_P004 | Maize | nucleus | 34.24 | 34.66 |
| Os02t0259900-01 | Rice | cytosol, nucleus | 9.62 | 28.67 |
| GSMUA_Achr10P... | Banana | nucleus | 15.68 | 24.44 |
| CDX80000 | Canola | nucleus | 8.33 | 21.53 |
| Solyc01g095320.2.1 | Tomato | nucleus | 15.76 | 21.4 |
| KRH06550 | Soybean | nucleus | 18.79 | 21.38 |
| CDY42022 | Canola | nucleus | 14.62 | 21.21 |
| KRH47996 | Soybean | cytosol | 18.56 | 21.08 |
| PGSC0003DMT400000246 | Potato | nucleus | 19.32 | 20.58 |
| AT2G46240.1 | Thale cress | cytosol | 14.92 | 18.89 |
| Bra004553.1-P | Field mustard | nucleus | 9.09 | 17.88 |
| KRH00024 | Soybean | nucleus | 9.02 | 17.53 |
| VIT_15s0046g01560.t01 | Wine grape | nucleus | 14.77 | 16.2 |
| KRH75967 | Soybean | nucleus | 6.97 | 15.92 |
| KRH65782 | Soybean | cytosol | 5.53 | 13.52 |
Protein Annotations
| EnsemblPlants:TraesCS4D01G357900.7 | EnsemblPlantsGene:TraesCS4D01G357900 | Gene3D:1.20.58.120 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0051087 | InterPro:BAG_dom_sf | InterPro:BAG_domain | InterPro:IPR000048 | InterPro:IPR003103 | InterPro:IPR036533 |
| InterPro:IQ_motif_EF-hand-BS | ncoils:Coil | PANTHER:PTHR33322 | PANTHER:PTHR33322:SF4 | PFAM:PF02179 | PFscan:PS50096 |
| PFscan:PS51035 | SEG:seg | SMART:SM00264 | SUPFAM:SSF63491 | MapMan:35.1 | : |
Description
No Description!
Coordinates
chr4D:+:505999122..506003500
Molecular Weight (calculated)
144309.0 Da
IEP (calculated)
4.782
GRAVY (calculated)
-0.967
Length
1320 amino acids
Sequence
(BLAST)
(BLAST)
0001: MYPTNHYMDP YSSYYRHHAP YPYYPPPGWE AGHQQMPEPD CSPCRPPYRP WPYSASMNHS GLPESHSHSC CSHTYPPGYY SFRPPFPQEI PPPPPYYHGP
0101: FPPHHPNPYS PSYFGPLPPP YPVDQTPYSG YDKFKSHCCG CPNHVCHGDG GQKSNVKIEE HMPESNHKGA DNNSSIIRNP NYQYPVMWLP SGDMKDNKGS
0201: GRSFEFPPQF FSKWFPQSGE RTEDVKPADD SQKAKQLQWP LVWMPPGYGE TKPEAKKEPK EIEQSPKNTQ EDPPSPKIKI IPLSWFGNDS HDQKPAAREG
0301: SGEQNGRSSA TSQTAGTERR HDTTVDGNCK TVPVVPEKPN SGNEPAISVV QEKPNSANEP ATISVVPEKH GVEKKVHTCR TIPVMAQKES DEKKSYMGGN
0401: KEEKKAIIVQ KEGENKKSNN VESTKAKPSK LPPVCLRVDP LPKKKSGNTS SRSSNQATQK VCEKVKDVKE AHGKNQETKL SEHQKEGKMP IKEKSSDEIA
0501: TNTGPRNVTV LDASVKHAQE KQVSTSMTDQ KVQPSVSAEA QENVSARSLQ ECDKNRKEDE LKIRSEAPNL ACEIKLSSPD AAVRIQSAYR GYHVRRWQPL
0601: EKLRKIKNVH KQMQDVEKQL QALEASSKQP TEKEHIAINE TIMNLLLNLD TIQNLHPVVR EARKSVARQL VCLQEKLDSL CKKLPAEPNH PKSEEASLTG
0701: VDGEQLPSSV NSNESMHDEL SSEVALKLSQ DGDSTEQKHQ TEEPSTAKEE VQDEEKAAAA GECQGVPPTD VMPDAASSGL ITEKKHQIEE PGILREECAE
0801: ECSCQQQKDG EKGEESSTHH IEPLHYTPAR QNCHTEESDQ RVSRTTTEDG KTSMTTACMD SELAADNQDG SAEGGQVQES APVGISWLKH DAAPAEDQFK
0901: EPGAPSLHLE DEDSSVPSKA ADPHENDPAI ADDSIAIMTP ADQQEESVDA DMQKEVAETM VDSDKEPNGM GDAGNMDYVT GANAETTKQE KIGLVGPEAT
1001: RQCDVSHMGD SALVEQQNEG GSAMENTVND VIGVEPEAIA LESRVAAIVE ETEAVPLEID GKTTENTLDD AAPLENRDKI MENTMNVAIG EDPEAAVPLE
1101: VEGKTIENTL NDAVGEEPEA VPLESRVKTM ENTLNDAGCP SKTSAEPALP ESRGDGAPCE HGGATVYANP NSKVPSESHG GEQKEQDDDG GKVDVSESLA
1201: CAVGANSAVP AQEAGEPEEG AAEGAFPEEE EAAATAPATR DDGLKSSYDG NNTGVSDENQ KLKEMLQKVL ASGNDQMGVI AELSDKVKSL ERKLAAHKRR
1301: RPKVRVQHRP ARDATANDVH
0101: FPPHHPNPYS PSYFGPLPPP YPVDQTPYSG YDKFKSHCCG CPNHVCHGDG GQKSNVKIEE HMPESNHKGA DNNSSIIRNP NYQYPVMWLP SGDMKDNKGS
0201: GRSFEFPPQF FSKWFPQSGE RTEDVKPADD SQKAKQLQWP LVWMPPGYGE TKPEAKKEPK EIEQSPKNTQ EDPPSPKIKI IPLSWFGNDS HDQKPAAREG
0301: SGEQNGRSSA TSQTAGTERR HDTTVDGNCK TVPVVPEKPN SGNEPAISVV QEKPNSANEP ATISVVPEKH GVEKKVHTCR TIPVMAQKES DEKKSYMGGN
0401: KEEKKAIIVQ KEGENKKSNN VESTKAKPSK LPPVCLRVDP LPKKKSGNTS SRSSNQATQK VCEKVKDVKE AHGKNQETKL SEHQKEGKMP IKEKSSDEIA
0501: TNTGPRNVTV LDASVKHAQE KQVSTSMTDQ KVQPSVSAEA QENVSARSLQ ECDKNRKEDE LKIRSEAPNL ACEIKLSSPD AAVRIQSAYR GYHVRRWQPL
0601: EKLRKIKNVH KQMQDVEKQL QALEASSKQP TEKEHIAINE TIMNLLLNLD TIQNLHPVVR EARKSVARQL VCLQEKLDSL CKKLPAEPNH PKSEEASLTG
0701: VDGEQLPSSV NSNESMHDEL SSEVALKLSQ DGDSTEQKHQ TEEPSTAKEE VQDEEKAAAA GECQGVPPTD VMPDAASSGL ITEKKHQIEE PGILREECAE
0801: ECSCQQQKDG EKGEESSTHH IEPLHYTPAR QNCHTEESDQ RVSRTTTEDG KTSMTTACMD SELAADNQDG SAEGGQVQES APVGISWLKH DAAPAEDQFK
0901: EPGAPSLHLE DEDSSVPSKA ADPHENDPAI ADDSIAIMTP ADQQEESVDA DMQKEVAETM VDSDKEPNGM GDAGNMDYVT GANAETTKQE KIGLVGPEAT
1001: RQCDVSHMGD SALVEQQNEG GSAMENTVND VIGVEPEAIA LESRVAAIVE ETEAVPLEID GKTTENTLDD AAPLENRDKI MENTMNVAIG EDPEAAVPLE
1101: VEGKTIENTL NDAVGEEPEA VPLESRVKTM ENTLNDAGCP SKTSAEPALP ESRGDGAPCE HGGATVYANP NSKVPSESHG GEQKEQDDDG GKVDVSESLA
1201: CAVGANSAVP AQEAGEPEEG AAEGAFPEEE EAAATAPATR DDGLKSSYDG NNTGVSDENQ KLKEMLQKVL ASGNDQMGVI AELSDKVKSL ERKLAAHKRR
1301: RPKVRVQHRP ARDATANDVH
001: MKRSRKFSSS TTTTTVIHTF YNDHTTPPAT KEIPIETPLP ATKANVKTNA TAAAARIQSG YRSYRIRNLY KKISSINREA NRVQSIIQRQ ETVDAIRSDE
101: KERLRMNETL MALLLKLDSV PGLDPTIREA RRKVSRKIVG MQEILDSISE TKDEIQWWNY NDLGGVDSGQ GGGAWPLYWE EAVEEEMCRE RGGEEMERFC
201: AQYLGFRCFQ RFLRE
101: KERLRMNETL MALLLKLDSV PGLDPTIREA RRKVSRKIVG MQEILDSISE TKDEIQWWNY NDLGGVDSGQ GGGAWPLYWE EAVEEEMCRE RGGEEMERFC
201: AQYLGFRCFQ RFLRE
Arabidopsis Description
BAG5BAG5 [Source:UniProtKB/TrEMBL;Acc:A0A178WFD4]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.