Factsheet for PGSC0003DMT400000246

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 3
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
PGSC0003DMT400014123
PGSC0003DMT400018569
PGSC0003DMT400046278
PGSC0003DMT400054299
PGSC0003DMT400058435
PGSC0003DMT400070437
PGSC0003DMT400097662

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G46240.1	PGSC0003DMT400014123	AT3G56800.1	16003391
AT2G46240.1	PGSC0003DMT400018569	AT3G56800.1	16003391
AT2G46240.1	PGSC0003DMT400046278	AT3G56800.1	16003391
AT2G46240.1	PGSC0003DMT400054299	AT3G56800.1	16003391
AT2G46240.1	PGSC0003DMT400058435	AT3G56800.1	16003391
AT2G46240.1	PGSC0003DMT400070437	AT3G56800.1	16003391
AT2G46240.1	PGSC0003DMT400097662	AT3G56800.1	16003391
AT2G46240.1	PGSC0003DMT400014123	AT5G21274.1	16003391
AT2G46240.1	PGSC0003DMT400018569	AT5G21274.1	16003391
AT2G46240.1	PGSC0003DMT400046278	AT5G21274.1	16003391
AT2G46240.1	PGSC0003DMT400054299	AT5G21274.1	16003391
AT2G46240.1	PGSC0003DMT400058435	AT5G21274.1	16003391
AT2G46240.1	PGSC0003DMT400070437	AT5G21274.1	16003391
AT2G46240.1	PGSC0003DMT400097662	AT5G21274.1	16003391

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc01g095320.2.1	Tomato	nucleus	44.39	56.58
Os02t0259850-00	Rice	nucleus	5.73	28.29
Zm00001d045678_P001	Maize	cytosol	14.61	27.68
Zm00001d005246_P001	Maize	nucleus	8.23	26.29
Zm00001d048489_P001	Maize	cytosol, nucleus, plastid	6.21	25.84
GSMUA_Achr10P...	Banana	nucleus	16.3	23.85
KRH47996	Soybean	cytosol	22.36	23.84
KRH06550	Soybean	nucleus	22.2	23.71
Zm00001d046131_P001	Maize	nucleus	5.57	23.15
CDY42022	Canola	nucleus	16.38	22.31
CDX80000	Canola	nucleus	9.12	22.11
TraesCS4B01G382700.2	Wheat	cytosol	18.89	21.49
TraesCS7B01G388700.4	Wheat	nucleus	21.47	20.18
Zm00001d016070_P004	Maize	nucleus	20.74	19.71
TraesCS5A01G548000.4	Wheat	cytosol	20.58	19.44
HORVU4Hr1G090660.1	Barley	cytosol	20.66	19.42
Bra004553.1-P	Field mustard	nucleus	10.49	19.37
TraesCS4D01G357900.7	Wheat	cytosol	20.58	19.32
AT2G46240.1	Thale cress	cytosol	16.06	19.08
VIT_15s0046g01560.t01	Wine grape	nucleus	18.48	19.02
OQU84742	Sorghum	nucleus	20.98	18.87
KRH00024	Soybean	nucleus	9.69	17.67
KRH65782	Soybean	cytosol	7.02	16.11
Os02t0259900-01	Rice	cytosol, nucleus	5.65	15.8
KRH75967	Soybean	nucleus	7.18	15.4

Protein Annotations

Gene3D:1.20.58.120	EntrezGene:102592057	MapMan:35.1	InterPro:BAG_dom_sf	InterPro:BAG_domain	ncoils:Coil
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0051087	InterPro:IPR000048	InterPro:IPR003103
InterPro:IPR036533	InterPro:IQ_motif_EF-hand-BS	UniProt:M0ZGD3	PFAM:PF02179	EnsemblPlantsGene:PGSC0003DMG400000079	PGSC:PGSC0003DMG400000079
EnsemblPlants:PGSC0003DMT400000246	PFscan:PS50096	PFscan:PS51035	PANTHER:PTHR33322	PANTHER:PTHR33322:SF4	SMART:SM00264
SUPFAM:SSF63491	UniParc:UPI000296381B	RefSeq:XP_006339652.1	SEG:seg	:	:

Description

BCL-2-associated athanogene 6 [Source:PGSC_GENE;Acc:PGSC0003DMG400000079]

Coordinates

chr1:+:72843419..72848705

Molecular Weight (calculated)

137225.0 Da

IEP (calculated)

4.759

GRAVY (calculated)

-0.971

Length

1239 amino acids

Sequence
(BLAST)

0001: MYPMNPYQRN QVPYNPHYYP HFESNPHHHM NIDPTRSTLP YESWPCGGSS YGHPYPPQCH SCCIHNNSPS QCAFSPPYPY LPPPTYPVMY PTHYVPPPHF
0101: SMEQPRYEYE KNMGRDHHCC GCSNHQCGSK KGGGSSVKIE EHGQDKKNES NESLVPFGFK NCPYPVVSLP PDDMKNREHM KPNGSNCKEE EENPQVVKPF
0201: GDFRPFQQPN VWNLWPSHYG NSSESPKQTG DLPGKQQDDD SIRKQFPFPI IWMPYKPEED GERVGKETES GLIAEKEPTS PSKLTKPMLH DSEDKRSSSK
0301: ENEVISGSEI RGKGLNKGTV VKIIPVKQVE QNEIFDGKKE EASERHESDA KQKKIAQEGG KKQSPSPTKS SKLPPVCLRV DPLPRKKSSN GNSRSPSPPC
0401: GKGKLVESRS ESSKPPIQSN EKENVQLDKS STTSMPKKST EVEPSKGKTK VVEVAQGTSK EDKLQDQCTV FSDLKRQARS QTGEGDTSKA ANKPKDEPDA
0501: VAAKAQSSNE GHHRGEAREA ANVDVGAGNE MKRVKRSQLS DDKAATMIQS VYRGFNVRRW EPLKKLKQIA KIEEQMAEIK KRIQDLESSA DNGVDNKQRT
0601: IITEIIMSLL LKLDAIQGLH PAVREYRKSV AKEIVSLQEK LDLLNCKKQP AESEETFTAK SSEDTCTAVE DNPSLQGQEV QKLERDDDFT KGDEGIKFDA
0701: EGLCEEQPLC ATEMLPDSHD VGNAVLEGKE ENKDVEEVME GVSGSSAVKT GDGASVKPFE SEEKTDKLLD ENTAVVEKLE ERGDGVDELE ELPRGVLDEE
0801: TSIKGSAEIR KDTVDLTALT LDEKVSDTAS LEHHHLEALG ETPFILGTEN MHSSNGVEEN AEILERDAAV PIDIPKREKE DAKPLSEDAN ISDVDDKVGM
0901: EKNEKELDQG GSASDGFSIP SQEDAITTEQ PTDTTNAEES ETVEVLQEKM QNAVDKDIEI LDSGKPVEKS VEPQLSTGTN DEAREYHIQD KQKIGEENKE
1001: VQGEELPVRD DAVVSEPNNE GKERNVVVEQ RLVEESFEMQ GNEPVAAEPE TADNAAHVIE EPVDGTKATA APASEAVTTE TDLSREKELG VADDHNTHRS
1101: CDAVEGNSVD TSHSFGSSTP IEVQVMDANK LKEWMKVDMS PSSPTASQES CDSDALSESD KKLIEENEKL REMMEKLIKS GNEQLTAISS LYGRVKDLEK
1201: RLSKKKKLKL KRNRVPAAGS ACVKPLNDSL RNRSVGLAM

Best Arabidopsis Sequence Match ( AT2G46240.1 )
(BLAST)

0001: MMPVYMDPSQ PCQMRPQEYY YQGFGNNSQH MAMDAPPPCH GSCVHGNFPA YWPPCYPPQV PYHQCCMNRS AFHPPHASYA PSCYVHPPFP VGYQPWFDVE
0101: KDVPGKHHCG KCSSQMCDLK KDRGVVIEEH EPEIEKGEAV LPVRSTNCPY PIIWIPHENA RNQEYRSSLG LGKHNQPPAE VRAPDNMTIQ KSFPESWRGC
0201: FPFDESSMKS LVQNQDSKKA QNGKTVEAPF DISKFKSLLQ GQDMKEAQIQ KNKEELGQLT YPTSWVPSRR KRDDVEASES SNEDRKKMQN GKTVEYPFDI
0301: SMIKSLIQGQ DVKEAQNQKN KEEPGQVPYP IFWIPSYGKR KDVEASESKE SSNEGRNLES CPSDLHRNEG QITQAKGKEG NFECNVLSDA EEKSSVINIP
0401: VANHLQEPRN IPVKLSENHL PKPTEPTKRI AKNEPVKSTK KEQSSSSSEA SKLPPVCLRV DPLPKERNGG SKSVSHPKRM EKSKETKIAA PLSSKKAESR
0501: TVPEACNVKC EDANAEMKMA EGSLNALRTE KGSVESNSNL QEESNGEIIK PCEAKENREQ PAKKSFTEEE AARIIQSMYR GYDVRRWEPI KKLKEIATVR
0601: EQMGDVKKRI EALEASTDQH IEEKEIVVNG ELVMNLLLKL DAVEGLHPSI REFRKALATE LSSIQDKLDS LKNSCASAEK EAVKEQVEIK SQPSDSPVNL
0701: EHSQLTEENK MVSDTNLEKV LRLSPEEHPM SVLNRTDEKQ AESAAETEEG YGLFETLATD SKQATENAAA ASSTTIPEKI GEVETVVPGN PPSADGNGMT
0801: VTNVEENKAM VVESLEEPIN ELPQMVEETE TNSIRDPENA SEVSEAETNS SENENRKGED DIVLHSEKNV ELSELPVGVI DEETQPLSQD PSSSYTREGN
0901: MTAMDPKTAS QEETEVDHSP NNSKGIGQQT SEPQDEKEQS PETEVIVKEQ PLETEVILNE QAPEPEITEP GISKETKKLM EENQRFKETM ETLVKAGREQ
1001: LEVISKLTSR VKSLEKKLSH KKKTQIRRRA SKPMSVSPTD AVL

Arabidopsis Description

BAG6BAG family molecular chaperone regulator 6 [Source:UniProtKB/Swiss-Prot;Acc:O82345]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.