Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- cytosol 1
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d045678_P001 | Maize | cytosol | 48.21 | 18.5 |
| TraesCS4B01G382700.2 | Wheat | cytosol | 62.15 | 14.33 |
| TraesCS7B01G388700.4 | Wheat | nucleus | 60.56 | 11.53 |
| TraesCS4D01G357900.7 | Wheat | cytosol | 59.76 | 11.36 |
| TraesCS5A01G548000.4 | Wheat | cytosol | 58.57 | 11.2 |
| OQU84742 | Sorghum | nucleus | 60.56 | 11.03 |
| Zm00001d016070_P004 | Maize | nucleus | 56.57 | 10.89 |
| HORVU4Hr1G090660.1 | Barley | cytosol | 55.78 | 10.62 |
| Solyc01g095320.2.1 | Tomato | nucleus | 28.29 | 7.3 |
| KRH06550 | Soybean | nucleus | 31.47 | 6.81 |
| CDY42022 | Canola | nucleus | 22.71 | 6.26 |
| KRH47996 | Soybean | cytosol | 28.29 | 6.11 |
| PGSC0003DMT400000246 | Potato | nucleus | 28.29 | 5.73 |
| VIT_15s0046g01560.t01 | Wine grape | nucleus | 24.7 | 5.15 |
| Zm00001d046131_P001 | Maize | nucleus | 5.98 | 5.03 |
| AT2G46240.1 | Thale cress | cytosol | 17.13 | 4.12 |
| Zm00001d005246_P001 | Maize | nucleus | 5.98 | 3.87 |
| KRH75967 | Soybean | nucleus | 5.58 | 2.42 |
| GSMUA_Achr10P... | Banana | nucleus | 7.97 | 2.36 |
| KRH00024 | Soybean | nucleus | 1.59 | 0.59 |
| Zm00001d048489_P001 | Maize | cytosol, nucleus, plastid | 0.0 | 0.0 |
| Os02t0259900-01 | Rice | cytosol, nucleus | 0.0 | 0.0 |
| KRH65782 | Soybean | cytosol | 0.0 | 0.0 |
| CDX80000 | Canola | nucleus | 0.0 | 0.0 |
| Bra004553.1-P | Field mustard | nucleus | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:Os02t0259850-00 | EnsemblPlantsGene:Os02g0259850 | PANTHER:PTHR33322 | PANTHER:PTHR33322:SF4 | ProteinID:BAS77980.1 | SEG:seg |
| UniParc:UPI000393A198 | UniProt:A0A0P0VHA1 | MapMan:35.2 | : | : | : |
Description
Hypothetical gene. (Os02t0259850-00)
Coordinates
chr2:+:9016923..9018833
Molecular Weight (calculated)
29303.9 Da
IEP (calculated)
7.050
GRAVY (calculated)
-1.176
Length
251 amino acids
Sequence
(BLAST)
(BLAST)
001: MYPANQYMDP YYSHYRNHAP YAHYPPSGCW EVSHPRMAMD SSCRPPSYGP WPNMNHLHPP EFHSCCNHTY PPGYYSFRLP SPQEIPPPHL YYHGPFPQHP
101: NAYPSYFARP PPYPVDQTAY GYDKFKSHCC GCPNHSCHGG ERSNIKIEEE RPEVNPDTEQ RDASGSDIVR HPNYQNQAIW LPSGNMNDKE NKKSMELPPQ
201: FYNGWIPVSG KWVGDVKQQD QDDQKAKQFQ WPIFWMPAGY NEKRQEAKEL K
101: NAYPSYFARP PPYPVDQTAY GYDKFKSHCC GCPNHSCHGG ERSNIKIEEE RPEVNPDTEQ RDASGSDIVR HPNYQNQAIW LPSGNMNDKE NKKSMELPPQ
201: FYNGWIPVSG KWVGDVKQQD QDDQKAKQFQ WPIFWMPAGY NEKRQEAKEL K
0001: MKSSTRLDSV AFQLTPTRTR CDLLVTANGK TEKIATGLLD PFLAHLKTAK DQLEKGGYSI ILKPEASDNA AWFTKGTIER FVRFVSTPEV IERVYTLETE
0101: IIQIKEAIGI QNNSEMALTV VKDDHRAKKA DSAEGSRPLL QLNEEKAIVL YEPDSHPKQA NRSTSSDENS KAQVMKVLET RKIMLQKEQG MAFARAVAAG
0201: FEADDMIPLI SFAKTFGASR LMDACVKFMD LWKKKHETGQ WVEIEATEVM ATQPNISTMN DSGIMFANAA NMPGTPENSD AKSPTDNKRN GNQEYVQGQH
0301: RQPMYAPWPV HSPPGTFPVF QGYTMQGMPY YPGYPGASPY PSPYPSTDDS RRGSGQRKAR KHHSSCSEDS ESEDQERDNE KSSRRRKSGK VVIRNINYIN
0401: SKKQDNSGTE SDADDNHEEV ARGECYNGKE RATKGTEADT GDWQAFQTFL LQDADRDERS IDHMMEKEIR GKKRQGTGKY DPLAHGERES GKYQERDTAD
0501: IRNGSVTRRI RGSSDSLMVH QRENGFENSS DPLNMNGFDT PRNGLDKRNM DDDSYIVTRV SSARDEAGRN KRNAIDIGSE ISSCYQTDGN ERKQVNYEPH
0601: DLSLIPERET EKLSAGYDPA LEFGSKALKK NSQAAGGAKK LVKDPKSRLS KDAADKRKAP GPIRKGRPTK MSPLDEARAR ADKLRNFKAD LQKMKKEKEE
0701: EDRKRIEALK IERQKRIASK SNSAVGQSQL PAQQTKKQIL NKFSPGSRAS KFSDSEPGSL SPLQRLPRRT TSLGSNDFQK FPKNGKLSTV SKSTGNMLTR
0801: SISPLPPAKR ESIATGIRLT RSISPLPLSK RETRVSLDTQ NKSVSQTRRL SEPKMGNTSA PSSSVRPRRT IASRKASDAP EIKKLSAIVN YDIAKIASLP
0901: ELKIKPTKGP SNVMVKGVEK TKSSASGIEP SGNKNKSLCQ NDIDETPVVE KTVVMVLPSS ARSISRDQVK NEKSDVVSEN STIREGVDKE GIVETMQECG
1001: NDLVLVSTLI LAESILIFVS TVLMKGMVIL LSG
0101: IIQIKEAIGI QNNSEMALTV VKDDHRAKKA DSAEGSRPLL QLNEEKAIVL YEPDSHPKQA NRSTSSDENS KAQVMKVLET RKIMLQKEQG MAFARAVAAG
0201: FEADDMIPLI SFAKTFGASR LMDACVKFMD LWKKKHETGQ WVEIEATEVM ATQPNISTMN DSGIMFANAA NMPGTPENSD AKSPTDNKRN GNQEYVQGQH
0301: RQPMYAPWPV HSPPGTFPVF QGYTMQGMPY YPGYPGASPY PSPYPSTDDS RRGSGQRKAR KHHSSCSEDS ESEDQERDNE KSSRRRKSGK VVIRNINYIN
0401: SKKQDNSGTE SDADDNHEEV ARGECYNGKE RATKGTEADT GDWQAFQTFL LQDADRDERS IDHMMEKEIR GKKRQGTGKY DPLAHGERES GKYQERDTAD
0501: IRNGSVTRRI RGSSDSLMVH QRENGFENSS DPLNMNGFDT PRNGLDKRNM DDDSYIVTRV SSARDEAGRN KRNAIDIGSE ISSCYQTDGN ERKQVNYEPH
0601: DLSLIPERET EKLSAGYDPA LEFGSKALKK NSQAAGGAKK LVKDPKSRLS KDAADKRKAP GPIRKGRPTK MSPLDEARAR ADKLRNFKAD LQKMKKEKEE
0701: EDRKRIEALK IERQKRIASK SNSAVGQSQL PAQQTKKQIL NKFSPGSRAS KFSDSEPGSL SPLQRLPRRT TSLGSNDFQK FPKNGKLSTV SKSTGNMLTR
0801: SISPLPPAKR ESIATGIRLT RSISPLPLSK RETRVSLDTQ NKSVSQTRRL SEPKMGNTSA PSSSVRPRRT IASRKASDAP EIKKLSAIVN YDIAKIASLP
0901: ELKIKPTKGP SNVMVKGVEK TKSSASGIEP SGNKNKSLCQ NDIDETPVVE KTVVMVLPSS ARSISRDQVK NEKSDVVSEN STIREGVDKE GIVETMQECG
1001: NDLVLVSTLI LAESILIFVS TVLMKGMVIL LSG
Arabidopsis Description
COP1-interacting protein-like protein [Source:UniProtKB/TrEMBL;Acc:F4K5Y5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.