Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d005246_P001 | Maize | nucleus | 13.11 | 28.61 |
| Zm00001d048489_P001 | Maize | cytosol, nucleus, plastid | 9.21 | 26.17 |
| Zm00001d046131_P001 | Maize | nucleus | 9.09 | 25.84 |
| CDX80000 | Canola | nucleus | 14.29 | 23.68 |
| Zm00001d045678_P001 | Maize | cytosol | 16.88 | 21.87 |
| Bra004553.1-P | Field mustard | nucleus | 14.76 | 18.63 |
| CDY42022 | Canola | nucleus | 19.83 | 18.46 |
| Os02t0259900-01 | Rice | cytosol, nucleus | 9.33 | 17.83 |
| Zm00001d016070_P004 | Maize | nucleus | 26.56 | 17.25 |
| OQU84742 | Sorghum | nucleus | 27.75 | 17.05 |
| Solyc01g095320.2.1 | Tomato | nucleus | 18.89 | 16.46 |
| PGSC0003DMT400000246 | Potato | nucleus | 23.85 | 16.3 |
| TraesCS7B01G388700.4 | Wheat | nucleus | 24.79 | 15.93 |
| TraesCS5A01G548000.4 | Wheat | cytosol | 24.68 | 15.93 |
| HORVU4Hr1G090660.1 | Barley | cytosol | 24.44 | 15.71 |
| TraesCS4D01G357900.7 | Wheat | cytosol | 24.44 | 15.68 |
| AT2G46240.1 | Thale cress | cytosol | 19.24 | 15.63 |
| KRH06550 | Soybean | nucleus | 21.37 | 15.6 |
| TraesCS4B01G382700.2 | Wheat | cytosol | 19.95 | 15.52 |
| KRH47996 | Soybean | cytosol | 21.25 | 15.49 |
| KRH00024 | Soybean | nucleus | 11.92 | 14.87 |
| KRH65782 | Soybean | cytosol | 7.91 | 12.41 |
| KRH75967 | Soybean | nucleus | 8.03 | 11.76 |
| VIT_15s0046g01560.t01 | Wine grape | nucleus | 16.53 | 11.63 |
| Os02t0259850-00 | Rice | nucleus | 2.36 | 7.97 |
Protein Annotations
| Gene3D:1.20.58.120 | MapMan:35.1 | InterPro:BAG_dom_sf | InterPro:BAG_domain | ncoils:Coil | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0051087 | EnsemblPlantsGene:GSMUA_Achr10G14650_001 | EnsemblPlants:GSMUA_Achr10P14650_001 | EnsemblPlants:GSMUA_Achr10T14650_001 |
| InterPro:IPR000048 | InterPro:IPR003103 | InterPro:IPR036533 | InterPro:IQ_motif_EF-hand-BS | UniProt:M0RI91 | PFAM:PF02179 |
| PFscan:PS50096 | PFscan:PS51035 | PANTHER:PTHR33322 | PANTHER:PTHR33322:SF4 | SMART:SM00264 | SUPFAM:SSF63491 |
| UniParc:UPI00029532BF | SEG:seg | : | : | : | : |
Description
Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_Achr10G14650_001]
Coordinates
chr10:-:22853622..22856860
Molecular Weight (calculated)
94598.9 Da
IEP (calculated)
4.839
GRAVY (calculated)
-0.924
Length
847 amino acids
Sequence
(BLAST)
(BLAST)
001: MTNKSSESSP QWNGWIPMDI NGLDGAKQDE DGKKSLQYDE RRNQFPWPII WMPGDQKSED KDLKEINSNP EVKETPSSKI KLIPLKLLGD EHISPGDKED
101: RHKTLGHREA VTERKSRTKI IPVKHIEEDN QKRPNMDEKR KDKEEEKSHS IPEKQEENGA KKSISKLLPP TKTSKLPPVC LRVDPLPRKK PTNGTSRSPS
201: PPGFKDQEKA HKEKTEREQP ILKDKKEEIS KKEVRVVEAA DKLSNEAENP KTESQEMMTA TVKEEYAKIE ENQQPDKGTG LEAMENSESI INEQRKERKI
301: LSQSDAATLI QSAYRGFEMR RWQPLEKLRK IHQIRQQTEA VKKQIQMFEA SSKEQDLKHK VAISEAIMNL LLQLDTIQGL HPSVRDMRKH VARELISLQD
401: KLDSLGDHEK MEVEKQLDSD CGAISSTNSF VTTNLEPEHM SSQSEKTFVD EKEEAAIKWQ TDDAVITESP DSVAGTGDLK SLNVDMGSTT EEHQDIAPLE
501: EQLSSALREA VESHVTEEEQ SCVSEGVTEK KQSSGLEAGN DETGDVKLEK PSVPSVKGED IELAAEESNH SLKAINPEQV QLVEATAGVK EGDFDVKGTI
601: LPGDEVDTMR EDLQVPDQKS CDLVEKMVGN TDVVHVVTEV PCSEQPFLGT CAIDNGNAGC TVGNIEKRAE DADSIVTHLP DATYNQCHSP GDFEVGKENG
701: VNPMLLPDGT NIIKDECFSS VETSEPKIDK VHSLVEALEP VSMSPRQLPD AVNINKDERV SADEPFEANA NDAADGNLSK EEKKLVEENE KLREMLETLL
801: KAGQAQLGVI ADLNGRVKDL ERKLSQKRRC KVKSSKPRRP SPRKVAS
101: RHKTLGHREA VTERKSRTKI IPVKHIEEDN QKRPNMDEKR KDKEEEKSHS IPEKQEENGA KKSISKLLPP TKTSKLPPVC LRVDPLPRKK PTNGTSRSPS
201: PPGFKDQEKA HKEKTEREQP ILKDKKEEIS KKEVRVVEAA DKLSNEAENP KTESQEMMTA TVKEEYAKIE ENQQPDKGTG LEAMENSESI INEQRKERKI
301: LSQSDAATLI QSAYRGFEMR RWQPLEKLRK IHQIRQQTEA VKKQIQMFEA SSKEQDLKHK VAISEAIMNL LLQLDTIQGL HPSVRDMRKH VARELISLQD
401: KLDSLGDHEK MEVEKQLDSD CGAISSTNSF VTTNLEPEHM SSQSEKTFVD EKEEAAIKWQ TDDAVITESP DSVAGTGDLK SLNVDMGSTT EEHQDIAPLE
501: EQLSSALREA VESHVTEEEQ SCVSEGVTEK KQSSGLEAGN DETGDVKLEK PSVPSVKGED IELAAEESNH SLKAINPEQV QLVEATAGVK EGDFDVKGTI
601: LPGDEVDTMR EDLQVPDQKS CDLVEKMVGN TDVVHVVTEV PCSEQPFLGT CAIDNGNAGC TVGNIEKRAE DADSIVTHLP DATYNQCHSP GDFEVGKENG
701: VNPMLLPDGT NIIKDECFSS VETSEPKIDK VHSLVEALEP VSMSPRQLPD AVNINKDERV SADEPFEANA NDAADGNLSK EEKKLVEENE KLREMLETLL
801: KAGQAQLGVI ADLNGRVKDL ERKLSQKRRC KVKSSKPRRP SPRKVAS
0001: MMPVYMDPSQ PCQMRPQEYY YQGFGNNSQH MAMDAPPPCH GSCVHGNFPA YWPPCYPPQV PYHQCCMNRS AFHPPHASYA PSCYVHPPFP VGYQPWFDVE
0101: KDVPGKHHCG KCSSQMCDLK KDRGVVIEEH EPEIEKGEAV LPVRSTNCPY PIIWIPHENA RNQEYRSSLG LGKHNQPPAE VRAPDNMTIQ KSFPESWRGC
0201: FPFDESSMKS LVQNQDSKKA QNGKTVEAPF DISKFKSLLQ GQDMKEAQIQ KNKEELGQLT YPTSWVPSRR KRDDVEASES SNEDRKKMQN GKTVEYPFDI
0301: SMIKSLIQGQ DVKEAQNQKN KEEPGQVPYP IFWIPSYGKR KDVEASESKE SSNEGRNLES CPSDLHRNEG QITQAKGKEG NFECNVLSDA EEKSSVINIP
0401: VANHLQEPRN IPVKLSENHL PKPTEPTKRI AKNEPVKSTK KEQSSSSSEA SKLPPVCLRV DPLPKERNGG SKSVSHPKRM EKSKETKIAA PLSSKKAESR
0501: TVPEACNVKC EDANAEMKMA EGSLNALRTE KGSVESNSNL QEESNGEIIK PCEAKENREQ PAKKSFTEEE AARIIQSMYR GYDVRRWEPI KKLKEIATVR
0601: EQMGDVKKRI EALEASTDQH IEEKEIVVNG ELVMNLLLKL DAVEGLHPSI REFRKALATE LSSIQDKLDS LKNSCASAEK EAVKEQVEIK SQPSDSPVNL
0701: EHSQLTEENK MVSDTNLEKV LRLSPEEHPM SVLNRTDEKQ AESAAETEEG YGLFETLATD SKQATENAAA ASSTTIPEKI GEVETVVPGN PPSADGNGMT
0801: VTNVEENKAM VVESLEEPIN ELPQMVEETE TNSIRDPENA SEVSEAETNS SENENRKGED DIVLHSEKNV ELSELPVGVI DEETQPLSQD PSSSYTREGN
0901: MTAMDPKTAS QEETEVDHSP NNSKGIGQQT SEPQDEKEQS PETEVIVKEQ PLETEVILNE QAPEPEITEP GISKETKKLM EENQRFKETM ETLVKAGREQ
1001: LEVISKLTSR VKSLEKKLSH KKKTQIRRRA SKPMSVSPTD AVL
0101: KDVPGKHHCG KCSSQMCDLK KDRGVVIEEH EPEIEKGEAV LPVRSTNCPY PIIWIPHENA RNQEYRSSLG LGKHNQPPAE VRAPDNMTIQ KSFPESWRGC
0201: FPFDESSMKS LVQNQDSKKA QNGKTVEAPF DISKFKSLLQ GQDMKEAQIQ KNKEELGQLT YPTSWVPSRR KRDDVEASES SNEDRKKMQN GKTVEYPFDI
0301: SMIKSLIQGQ DVKEAQNQKN KEEPGQVPYP IFWIPSYGKR KDVEASESKE SSNEGRNLES CPSDLHRNEG QITQAKGKEG NFECNVLSDA EEKSSVINIP
0401: VANHLQEPRN IPVKLSENHL PKPTEPTKRI AKNEPVKSTK KEQSSSSSEA SKLPPVCLRV DPLPKERNGG SKSVSHPKRM EKSKETKIAA PLSSKKAESR
0501: TVPEACNVKC EDANAEMKMA EGSLNALRTE KGSVESNSNL QEESNGEIIK PCEAKENREQ PAKKSFTEEE AARIIQSMYR GYDVRRWEPI KKLKEIATVR
0601: EQMGDVKKRI EALEASTDQH IEEKEIVVNG ELVMNLLLKL DAVEGLHPSI REFRKALATE LSSIQDKLDS LKNSCASAEK EAVKEQVEIK SQPSDSPVNL
0701: EHSQLTEENK MVSDTNLEKV LRLSPEEHPM SVLNRTDEKQ AESAAETEEG YGLFETLATD SKQATENAAA ASSTTIPEKI GEVETVVPGN PPSADGNGMT
0801: VTNVEENKAM VVESLEEPIN ELPQMVEETE TNSIRDPENA SEVSEAETNS SENENRKGED DIVLHSEKNV ELSELPVGVI DEETQPLSQD PSSSYTREGN
0901: MTAMDPKTAS QEETEVDHSP NNSKGIGQQT SEPQDEKEQS PETEVIVKEQ PLETEVILNE QAPEPEITEP GISKETKKLM EENQRFKETM ETLVKAGREQ
1001: LEVISKLTSR VKSLEKKLSH KKKTQIRRRA SKPMSVSPTD AVL
Arabidopsis Description
BAG6BAG family molecular chaperone regulator 6 [Source:UniProtKB/Swiss-Prot;Acc:O82345]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.