Factsheet for Solyc01g095320.2.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 3
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Solyc01g008950.2.1
Solyc10g077010.1.1
Solyc10g081170.1.1
Solyc11g072240.1.1
Solyc12g099990.1.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G46240.1	Solyc01g008950.2.1	AT3G56800.1	16003391
AT2G46240.1	Solyc10g077010.1.1	AT3G56800.1	16003391
AT2G46240.1	Solyc10g081170.1.1	AT3G56800.1	16003391
AT2G46240.1	Solyc11g072240.1.1	AT3G56800.1	16003391
AT2G46240.1	Solyc12g099990.1.1	AT3G56800.1	16003391
AT2G46240.1	Solyc01g008950.2.1	AT5G21274.1	16003391
AT2G46240.1	Solyc10g077010.1.1	AT5G21274.1	16003391
AT2G46240.1	Solyc10g081170.1.1	AT5G21274.1	16003391
AT2G46240.1	Solyc11g072240.1.1	AT5G21274.1	16003391
AT2G46240.1	Solyc12g099990.1.1	AT5G21274.1	16003391

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400000246	Potato	nucleus	56.58	44.39
Os02t0259850-00	Rice	nucleus	7.3	28.29
Zm00001d045678_P001	Maize	cytosol	17.49	25.99
Zm00001d048489_P001	Maize	cytosol, nucleus, plastid	7.72	25.17
Zm00001d005246_P001	Maize	nucleus	9.26	23.2
Zm00001d046131_P001	Maize	nucleus	6.48	21.14
CDY42022	Canola	nucleus	18.83	20.11
KRH06550	Soybean	nucleus	23.66	19.83
KRH47996	Soybean	cytosol	23.56	19.71
VIT_15s0046g01560.t01	Wine grape	nucleus	23.77	19.19
GSMUA_Achr10P...	Banana	nucleus	16.46	18.89
TraesCS4B01G382700.2	Wheat	cytosol	20.88	18.64
CDX80000	Canola	nucleus	9.05	17.22
AT2G46240.1	Thale cress	cytosol	17.39	16.2
Zm00001d016070_P004	Maize	nucleus	21.71	16.18
TraesCS7B01G388700.4	Wheat	nucleus	21.6	15.93
TraesCS4D01G357900.7	Wheat	cytosol	21.4	15.76
TraesCS5A01G548000.4	Wheat	cytosol	21.09	15.62
HORVU4Hr1G090660.1	Barley	cytosol	21.09	15.55
OQU84742	Sorghum	nucleus	21.6	15.24
Bra004553.1-P	Field mustard	nucleus	10.19	14.75
KRH00024	Soybean	nucleus	10.19	14.58
KRH65782	Soybean	cytosol	7.1	12.78
KRH75967	Soybean	nucleus	7.2	12.11
Os02t0259900-01	Rice	cytosol, nucleus	3.29	7.22

Protein Annotations

Gene3D:1.20.58.120	MapMan:35.1	InterPro:BAG_dom_sf	InterPro:BAG_domain	ncoils:Coil	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0006457	GO:GO:0008150	GO:GO:0009266
GO:GO:0009506	GO:GO:0009605	GO:GO:0009607	GO:GO:0009628	GO:GO:0009987	GO:GO:0043207
GO:GO:0051087	InterPro:IPR000048	InterPro:IPR003103	InterPro:IPR036533	InterPro:IQ_motif_EF-hand-BS	UniProt:K4AZS1
PFAM:PF02179	PFscan:PS50096	PFscan:PS51035	PANTHER:PTHR33322	PANTHER:PTHR33322:SF4	SMART:SM00264
SUPFAM:SSF63491	EnsemblPlantsGene:Solyc01g095320.2	EnsemblPlants:Solyc01g095320.2.1	UniParc:UPI0002768F47	SEG:seg	:

Description

No Description!

Coordinates

chr1:+:86628756..86633652

Molecular Weight (calculated)

108586.0 Da

IEP (calculated)

5.378

GRAVY (calculated)

-1.022

Length

972 amino acids

Sequence
(BLAST)

001: MYPTNPYQRN QVPYNPHYYP RFESNPHHHM NIDPTRSTLP YESWPCGGSN YRHPYPPECH SCCIHNTSPS QCAFSPPYPY LPPSTYNNCS YPTYPVMYPT
101: HYVPHPHFTM EQPRYEYEKN MGRDHHCCGC SNHKCGSKKG GSSVKIEEHD QDKGNDCNDS LVPFGFNNCP YPVVCLPPDD MKNRERMKPD GSNCKEQEEN
201: PQPLKPLGDF RPSQQPNFWK LWPSHYGNSS GSPKENGDFP EKQHHDDAIR KQFPFPIIWM PYRPEEDREE VGKETESGLI AEKEPTSPSK LTKLMSHDSE
301: DKRSSSKENE VNSGGDFHGK GLNKGSVVKT IPVKQVEQNE IFDGKKEEAS QRHESDAKQK KITQEAGRKQ STSPTKSSKL PPVCLRVDPL PRKKSSSGNS
401: RSPSPPRGKG KLVESRSDSS KPPIKSNEKE NVQLDKSSTT SMPRKSTEVE PSKSKAKVVE VAQGTAKEDI LHDQCTVFPD LKRQARSKIA EGDTGKAANK
501: PKDELDAVVA KAQSSNEAHQ RGEARQAVNE EVDAGNKTKR EKRSKMSNDE AATKIQSAYR GFTLRRWEPL KKLKQLAKIE EQMAEHKRHI QTLESSADNG
601: VDNKQRTFLT EVIMGLLLKL DTIQGLHPTV REYRKSVAKE LVSLQEKLDL LNCKKQPAES EQTVTAKSSE DTSMAVEDNP SLQGGQEVQK LERDDDFVKG
701: DEGIKFDAKG LCEEQTLCAT ELLANSHDVG NAVLEGKELN KDVEEVMEGV LGSSAVKTGD GASVQHFESE EKTDKLFDEN TIVVEKLEEH GDGVDELGEL
801: PRGVPDEETS IQGSAEIRQD TVDLTALTPE ERVSDTESLE HYQALGETSI ILGLENTHSS NGVEENADIV ERDAAVPIDI LEREKEVTKP LSEDANMSEV
901: DDKVGMEKNG KKLDQGGSAS DGFSVPSQEK AITIEQPTDT TNTEESETIE VLQEKMKTSR TIAGTSTIHW YQ

Best Arabidopsis Sequence Match ( AT2G46240.1 )
(BLAST)

0001: MMPVYMDPSQ PCQMRPQEYY YQGFGNNSQH MAMDAPPPCH GSCVHGNFPA YWPPCYPPQV PYHQCCMNRS AFHPPHASYA PSCYVHPPFP VGYQPWFDVE
0101: KDVPGKHHCG KCSSQMCDLK KDRGVVIEEH EPEIEKGEAV LPVRSTNCPY PIIWIPHENA RNQEYRSSLG LGKHNQPPAE VRAPDNMTIQ KSFPESWRGC
0201: FPFDESSMKS LVQNQDSKKA QNGKTVEAPF DISKFKSLLQ GQDMKEAQIQ KNKEELGQLT YPTSWVPSRR KRDDVEASES SNEDRKKMQN GKTVEYPFDI
0301: SMIKSLIQGQ DVKEAQNQKN KEEPGQVPYP IFWIPSYGKR KDVEASESKE SSNEGRNLES CPSDLHRNEG QITQAKGKEG NFECNVLSDA EEKSSVINIP
0401: VANHLQEPRN IPVKLSENHL PKPTEPTKRI AKNEPVKSTK KEQSSSSSEA SKLPPVCLRV DPLPKERNGG SKSVSHPKRM EKSKETKIAA PLSSKKAESR
0501: TVPEACNVKC EDANAEMKMA EGSLNALRTE KGSVESNSNL QEESNGEIIK PCEAKENREQ PAKKSFTEEE AARIIQSMYR GYDVRRWEPI KKLKEIATVR
0601: EQMGDVKKRI EALEASTDQH IEEKEIVVNG ELVMNLLLKL DAVEGLHPSI REFRKALATE LSSIQDKLDS LKNSCASAEK EAVKEQVEIK SQPSDSPVNL
0701: EHSQLTEENK MVSDTNLEKV LRLSPEEHPM SVLNRTDEKQ AESAAETEEG YGLFETLATD SKQATENAAA ASSTTIPEKI GEVETVVPGN PPSADGNGMT
0801: VTNVEENKAM VVESLEEPIN ELPQMVEETE TNSIRDPENA SEVSEAETNS SENENRKGED DIVLHSEKNV ELSELPVGVI DEETQPLSQD PSSSYTREGN
0901: MTAMDPKTAS QEETEVDHSP NNSKGIGQQT SEPQDEKEQS PETEVIVKEQ PLETEVILNE QAPEPEITEP GISKETKKLM EENQRFKETM ETLVKAGREQ
1001: LEVISKLTSR VKSLEKKLSH KKKTQIRRRA SKPMSVSPTD AVL

Arabidopsis Description

BAG6BAG family molecular chaperone regulator 6 [Source:UniProtKB/Swiss-Prot;Acc:O82345]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.