Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- plastid 1
- mitochondrion 2
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT2G46240.1 | CDY57144 | AT3G56800.1 | 16003391 |
| AT2G46240.1 | CDY65072 | AT3G56800.1 | 16003391 |
| AT2G46240.1 | CDX92401 | AT5G21274.1 | 16003391 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX80000 | Canola | nucleus | 40.11 | 71.43 |
| AT2G46240.1 | Thale cress | cytosol | 43.63 | 38.06 |
| Zm00001d048489_P001 | Maize | cytosol, nucleus, plastid | 8.24 | 25.17 |
| Zm00001d005246_P001 | Maize | nucleus | 10.33 | 24.23 |
| Zm00001d045678_P001 | Maize | cytosol | 16.81 | 23.39 |
| Os02t0259850-00 | Rice | nucleus | 6.26 | 22.71 |
| Zm00001d046131_P001 | Maize | nucleus | 7.03 | 21.48 |
| GSMUA_Achr10P... | Banana | nucleus | 18.46 | 19.83 |
| Solyc01g095320.2.1 | Tomato | nucleus | 20.11 | 18.83 |
| KRH06550 | Soybean | nucleus | 22.09 | 17.33 |
| KRH47996 | Soybean | cytosol | 21.76 | 17.04 |
| PGSC0003DMT400000246 | Potato | nucleus | 22.31 | 16.38 |
| TraesCS4B01G382700.2 | Wheat | cytosol | 19.34 | 16.16 |
| Zm00001d016070_P004 | Maize | nucleus | 22.42 | 15.64 |
| TraesCS5A01G548000.4 | Wheat | cytosol | 22.53 | 15.62 |
| TraesCS7B01G388700.4 | Wheat | nucleus | 21.76 | 15.02 |
| HORVU4Hr1G090660.1 | Barley | cytosol | 21.43 | 14.8 |
| TraesCS4D01G357900.7 | Wheat | cytosol | 21.21 | 14.62 |
| OQU84742 | Sorghum | nucleus | 22.09 | 14.59 |
| KRH00024 | Soybean | nucleus | 10.77 | 14.43 |
| VIT_15s0046g01560.t01 | Wine grape | nucleus | 17.91 | 13.54 |
| KRH75967 | Soybean | nucleus | 7.69 | 12.11 |
| KRH65782 | Soybean | cytosol | 7.03 | 11.85 |
| Os02t0259900-01 | Rice | cytosol, nucleus | 4.84 | 9.93 |
Protein Annotations
| Gene3D:1.20.58.120 | MapMan:35.1 | GO:A0A078HW64 | UniProt:A0A078HW64 | InterPro:BAG_dom_sf | InterPro:BAG_domain |
| EnsemblPlants:CDY42022 | ProteinID:CDY42022 | ProteinID:CDY42022.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0051087 | EnsemblPlantsGene:GSBRNA2T00074035001 | InterPro:IPR003103 | InterPro:IPR036533 | PFAM:PF02179 |
| PFscan:PS51035 | PANTHER:PTHR33322 | PANTHER:PTHR33322:SF4 | SMART:SM00264 | SUPFAM:SSF63491 | UniParc:UPI0004EDF1E0 |
| SEG:seg | : | : | : | : | : |
Description
BnaC04g01000DBnaC04g01000D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HW64]
Coordinates
chrLK032512:+:76724..80621
Molecular Weight (calculated)
101107.0 Da
IEP (calculated)
5.228
GRAVY (calculated)
-0.937
Length
910 amino acids
Sequence
(BLAST)
(BLAST)
001: MMPMYVNSSQ PGQMRPQGGC CYQGFGNYPH HVTMDASSPA SCEHWPTQSP CYGSCVHGNF PAYSPYWPPT PCYPPQAPYH TCWMNHHPQT PPCYVHQPFP
101: VGYQHGFESE KNRCTKCSPQ TCSPKNGTGV VIEEHEPETE KRRDNGEAVN DVRSTNYPYP IVWIPHENAR KQEHGSQKQP PAQIKAPKVQ KADPKSWNGC
201: FPLDENTIKS LIQNQDRNKL QNGELPFDIN KLKSLLQGQG QGQGQGQTQR SKDPGQLQYP IFWIPSQGKQ EDVEASEKKE RGNEGSDLKS VSPDHLNNGQ
301: CDNRNVVGNA VSDAEEKSLV RNIPVESHKE PTSIPVKLLE NHPPEPARSI VKTEPAEDAR KGQRSSPPKA SRLPPVCLRV DPLPKRRSGG SKSLSPPRRK
401: EQTLTSEQTK VASPLSSKMV ETRTIPESCN VKCEEANKEK KPTGTEKEPV ETKSDLQGVN CEIVKPCEAK ENEEKPAKKT FSEEEAAKII QSRYRGYDLR
501: RWEPIKKLKE IATVREQMSD VKKRVQALEL SADQHTDGKE IVVLGEMVMS LLLKLDSVQG LHPSIRDYRK SLARELSDMQ ENIDSLKKIS VEKEQVDTTS
601: QTSDPLVNLE ERQLAEENKM VSDSNTEKDC PASSEEHLRS LKNTTDGQLV AEAEEVTGLS ETLATDPEPA SETGVCEADS TTIPEKIEAP EAMLPINPSS
701: ADGNEMTVTN EEDKVMVKKL EEPLPELQQE VETTLGSENS SEVSETVADV SEAVANASET EDRKGDDDSV WPSEKDVELS DLPVGVIHEE VQLLTQDSLS
801: SPGEEKTVVD PSKEGTNVDH SSTGIGQGFE LGMSEETKRL MEENQRFKET VETLVKAGRE QLEVISKLTG RVKSLEKKLS QKKRTHVGRR KPNRGKQTTK
901: PMAASCTDAI
101: VGYQHGFESE KNRCTKCSPQ TCSPKNGTGV VIEEHEPETE KRRDNGEAVN DVRSTNYPYP IVWIPHENAR KQEHGSQKQP PAQIKAPKVQ KADPKSWNGC
201: FPLDENTIKS LIQNQDRNKL QNGELPFDIN KLKSLLQGQG QGQGQGQTQR SKDPGQLQYP IFWIPSQGKQ EDVEASEKKE RGNEGSDLKS VSPDHLNNGQ
301: CDNRNVVGNA VSDAEEKSLV RNIPVESHKE PTSIPVKLLE NHPPEPARSI VKTEPAEDAR KGQRSSPPKA SRLPPVCLRV DPLPKRRSGG SKSLSPPRRK
401: EQTLTSEQTK VASPLSSKMV ETRTIPESCN VKCEEANKEK KPTGTEKEPV ETKSDLQGVN CEIVKPCEAK ENEEKPAKKT FSEEEAAKII QSRYRGYDLR
501: RWEPIKKLKE IATVREQMSD VKKRVQALEL SADQHTDGKE IVVLGEMVMS LLLKLDSVQG LHPSIRDYRK SLARELSDMQ ENIDSLKKIS VEKEQVDTTS
601: QTSDPLVNLE ERQLAEENKM VSDSNTEKDC PASSEEHLRS LKNTTDGQLV AEAEEVTGLS ETLATDPEPA SETGVCEADS TTIPEKIEAP EAMLPINPSS
701: ADGNEMTVTN EEDKVMVKKL EEPLPELQQE VETTLGSENS SEVSETVADV SEAVANASET EDRKGDDDSV WPSEKDVELS DLPVGVIHEE VQLLTQDSLS
801: SPGEEKTVVD PSKEGTNVDH SSTGIGQGFE LGMSEETKRL MEENQRFKET VETLVKAGRE QLEVISKLTG RVKSLEKKLS QKKRTHVGRR KPNRGKQTTK
901: PMAASCTDAI
0001: MMPVYMDPSQ PCQMRPQEYY YQGFGNNSQH MAMDAPPPCH GSCVHGNFPA YWPPCYPPQV PYHQCCMNRS AFHPPHASYA PSCYVHPPFP VGYQPWFDVE
0101: KDVPGKHHCG KCSSQMCDLK KDRGVVIEEH EPEIEKGEAV LPVRSTNCPY PIIWIPHENA RNQEYRSSLG LGKHNQPPAE VRAPDNMTIQ KSFPESWRGC
0201: FPFDESSMKS LVQNQDSKKA QNGKTVEAPF DISKFKSLLQ GQDMKEAQIQ KNKEELGQLT YPTSWVPSRR KRDDVEASES SNEDRKKMQN GKTVEYPFDI
0301: SMIKSLIQGQ DVKEAQNQKN KEEPGQVPYP IFWIPSYGKR KDVEASESKE SSNEGRNLES CPSDLHRNEG QITQAKGKEG NFECNVLSDA EEKSSVINIP
0401: VANHLQEPRN IPVKLSENHL PKPTEPTKRI AKNEPVKSTK KEQSSSSSEA SKLPPVCLRV DPLPKERNGG SKSVSHPKRM EKSKETKIAA PLSSKKAESR
0501: TVPEACNVKC EDANAEMKMA EGSLNALRTE KGSVESNSNL QEESNGEIIK PCEAKENREQ PAKKSFTEEE AARIIQSMYR GYDVRRWEPI KKLKEIATVR
0601: EQMGDVKKRI EALEASTDQH IEEKEIVVNG ELVMNLLLKL DAVEGLHPSI REFRKALATE LSSIQDKLDS LKNSCASAEK EAVKEQVEIK SQPSDSPVNL
0701: EHSQLTEENK MVSDTNLEKV LRLSPEEHPM SVLNRTDEKQ AESAAETEEG YGLFETLATD SKQATENAAA ASSTTIPEKI GEVETVVPGN PPSADGNGMT
0801: VTNVEENKAM VVESLEEPIN ELPQMVEETE TNSIRDPENA SEVSEAETNS SENENRKGED DIVLHSEKNV ELSELPVGVI DEETQPLSQD PSSSYTREGN
0901: MTAMDPKTAS QEETEVDHSP NNSKGIGQQT SEPQDEKEQS PETEVIVKEQ PLETEVILNE QAPEPEITEP GISKETKKLM EENQRFKETM ETLVKAGREQ
1001: LEVISKLTSR VKSLEKKLSH KKKTQIRRRA SKPMSVSPTD AVL
0101: KDVPGKHHCG KCSSQMCDLK KDRGVVIEEH EPEIEKGEAV LPVRSTNCPY PIIWIPHENA RNQEYRSSLG LGKHNQPPAE VRAPDNMTIQ KSFPESWRGC
0201: FPFDESSMKS LVQNQDSKKA QNGKTVEAPF DISKFKSLLQ GQDMKEAQIQ KNKEELGQLT YPTSWVPSRR KRDDVEASES SNEDRKKMQN GKTVEYPFDI
0301: SMIKSLIQGQ DVKEAQNQKN KEEPGQVPYP IFWIPSYGKR KDVEASESKE SSNEGRNLES CPSDLHRNEG QITQAKGKEG NFECNVLSDA EEKSSVINIP
0401: VANHLQEPRN IPVKLSENHL PKPTEPTKRI AKNEPVKSTK KEQSSSSSEA SKLPPVCLRV DPLPKERNGG SKSVSHPKRM EKSKETKIAA PLSSKKAESR
0501: TVPEACNVKC EDANAEMKMA EGSLNALRTE KGSVESNSNL QEESNGEIIK PCEAKENREQ PAKKSFTEEE AARIIQSMYR GYDVRRWEPI KKLKEIATVR
0601: EQMGDVKKRI EALEASTDQH IEEKEIVVNG ELVMNLLLKL DAVEGLHPSI REFRKALATE LSSIQDKLDS LKNSCASAEK EAVKEQVEIK SQPSDSPVNL
0701: EHSQLTEENK MVSDTNLEKV LRLSPEEHPM SVLNRTDEKQ AESAAETEEG YGLFETLATD SKQATENAAA ASSTTIPEKI GEVETVVPGN PPSADGNGMT
0801: VTNVEENKAM VVESLEEPIN ELPQMVEETE TNSIRDPENA SEVSEAETNS SENENRKGED DIVLHSEKNV ELSELPVGVI DEETQPLSQD PSSSYTREGN
0901: MTAMDPKTAS QEETEVDHSP NNSKGIGQQT SEPQDEKEQS PETEVIVKEQ PLETEVILNE QAPEPEITEP GISKETKKLM EENQRFKETM ETLVKAGREQ
1001: LEVISKLTSR VKSLEKKLSH KKKTQIRRRA SKPMSVSPTD AVL
Arabidopsis Description
BAG6BAG family molecular chaperone regulator 6 [Source:UniProtKB/Swiss-Prot;Acc:O82345]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.