Factsheet for Zm00001d005246_P001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

cytosol 1
mitochondrion 1
nucleus 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d005003_P002
Zm00001d008278_P001
Zm00001d010649_P001
Zm00001d028948_P001
Zm00001d038543_P004
Zm00001d038545_P001
Zm00001d041430_P001
Zm00001d043144_P001
Zm00001d047597_P001
Zm00001d052415_P001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G46240.1	Zm00001d005003_P002	AT3G56800.1	16003391
AT2G46240.1	Zm00001d008278_P001	AT3G56800.1	16003391
AT2G46240.1	Zm00001d010649_P001	AT3G56800.1	16003391
AT2G46240.1	Zm00001d028948_P001	AT3G56800.1	16003391
AT2G46240.1	Zm00001d038543_P004	AT3G56800.1	16003391
AT2G46240.1	Zm00001d038545_P001	AT3G56800.1	16003391
AT2G46240.1	Zm00001d041430_P001	AT3G56800.1	16003391
AT2G46240.1	Zm00001d043144_P001	AT3G56800.1	16003391
AT2G46240.1	Zm00001d047597_P001	AT3G56800.1	16003391
AT2G46240.1	Zm00001d052415_P001	AT3G56800.1	16003391
AT2G46240.1	Zm00001d005003_P002	AT5G21274.1	16003391
AT2G46240.1	Zm00001d008278_P001	AT5G21274.1	16003391
AT2G46240.1	Zm00001d010649_P001	AT5G21274.1	16003391
AT2G46240.1	Zm00001d028948_P001	AT5G21274.1	16003391
AT2G46240.1	Zm00001d038543_P004	AT5G21274.1	16003391
AT2G46240.1	Zm00001d038545_P001	AT5G21274.1	16003391
AT2G46240.1	Zm00001d041430_P001	AT5G21274.1	16003391
AT2G46240.1	Zm00001d043144_P001	AT5G21274.1	16003391
AT2G46240.1	Zm00001d047597_P001	AT5G21274.1	16003391
AT2G46240.1	Zm00001d052415_P001	AT5G21274.1	16003391

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d046131_P001	Maize	nucleus	75.26	97.99
Zm00001d048489_P001	Maize	cytosol, nucleus, plastid	43.04	56.04
Zm00001d045678_P001	Maize	cytosol	76.03	45.11
Zm00001d016070_P004	Maize	nucleus	89.43	26.61
OQU84742	Sorghum	nucleus	73.71	20.75
TraesCS4B01G382700.2	Wheat	cytosol	44.59	15.89
TraesCS5A01G548000.4	Wheat	cytosol	45.88	13.57
HORVU4Hr1G090660.1	Barley	cytosol	45.88	13.51
TraesCS4D01G357900.7	Wheat	cytosol	45.1	13.26
GSMUA_Achr10P...	Banana	nucleus	28.61	13.11
TraesCS7B01G388700.4	Wheat	nucleus	44.33	13.05
CDY42022	Canola	nucleus	24.23	10.33
CDX80000	Canola	nucleus	12.89	9.78
Solyc01g095320.2.1	Tomato	nucleus	23.2	9.26
KRH00024	Soybean	nucleus	15.21	8.69
AT2G46240.1	Thale cress	cytosol	22.42	8.34
PGSC0003DMT400000246	Potato	nucleus	26.29	8.23
VIT_15s0046g01560.t01	Wine grape	nucleus	25.26	8.14
KRH47996	Soybean	cytosol	23.97	8.0
KRH06550	Soybean	nucleus	23.71	7.93
Bra004553.1-P	Field mustard	nucleus	13.14	7.6
Os02t0259850-00	Rice	nucleus	3.87	5.98
KRH65782	Soybean	cytosol	6.96	5.0
KRH75967	Soybean	nucleus	6.19	4.15
Os02t0259900-01	Rice	cytosol, nucleus	2.06	1.81

Protein Annotations

EnsemblPlants:Zm00001d005246_P001	EnsemblPlants:Zm00001d005246_T001	EnsemblPlantsGene:Zm00001d005246	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
GO:GO:0051087	InterPro:BAG_dom_sf	InterPro:IPR000048	InterPro:IPR036533	InterPro:IQ_motif_EF-hand-BS	PANTHER:PTHR33322
PANTHER:PTHR33322:SF4	PFscan:PS50096	ProteinID:ONM20677.1	SEG:seg	SUPFAM:SSF63491	UniParc:UPI00022073BB
UniProt:A0A1D6ELB1	MapMan:35.2	:	:	:	:

Description

BAG family molecular chaperone regulator 6

Coordinates

chr2:-:165580326..165581730

Molecular Weight (calculated)

43347.0 Da

IEP (calculated)

7.061

GRAVY (calculated)

-0.993

Length

388 amino acids

Sequence
(BLAST)

001: MKGKENGEHY ELSPQVLNEW APKSAARNGS GDHNNGSPVV TDHQDSMILE GNPKITPVVP KSIHDGKKPP RENCKTIPVV PEKEINEKKA STYRTIPVIK
101: ESDEKKIGMR EKRELKEANS AEMVEENRKT KHNDSSVVKH SKLPPVCLRV DPLPRKKPGN DSSRSPSPPR KDTDNTKKDV EEAQSQILEP KQSSTSKDIT
201: VSEVKEKSPY EMKKEVGFRN ETVEVASVEH LQEEEAPTSK DGQKVQAAST TVGDQENAAL KSIEEDHVQE NAGAGSLNGC DKRKNEDGTV IESETAKDDA
301: RTYGVNLSES DVAVRIQSAY RGYDVRKWQP LDKLRKIKHV HEQMQVVRKQ IQCLLDSCSK PTQKEQVAIG ETIMNLLLKL DAIQVYFS

Best Arabidopsis Sequence Match ( AT2G46240.1 )
(BLAST)

0001: MMPVYMDPSQ PCQMRPQEYY YQGFGNNSQH MAMDAPPPCH GSCVHGNFPA YWPPCYPPQV PYHQCCMNRS AFHPPHASYA PSCYVHPPFP VGYQPWFDVE
0101: KDVPGKHHCG KCSSQMCDLK KDRGVVIEEH EPEIEKGEAV LPVRSTNCPY PIIWIPHENA RNQEYRSSLG LGKHNQPPAE VRAPDNMTIQ KSFPESWRGC
0201: FPFDESSMKS LVQNQDSKKA QNGKTVEAPF DISKFKSLLQ GQDMKEAQIQ KNKEELGQLT YPTSWVPSRR KRDDVEASES SNEDRKKMQN GKTVEYPFDI
0301: SMIKSLIQGQ DVKEAQNQKN KEEPGQVPYP IFWIPSYGKR KDVEASESKE SSNEGRNLES CPSDLHRNEG QITQAKGKEG NFECNVLSDA EEKSSVINIP
0401: VANHLQEPRN IPVKLSENHL PKPTEPTKRI AKNEPVKSTK KEQSSSSSEA SKLPPVCLRV DPLPKERNGG SKSVSHPKRM EKSKETKIAA PLSSKKAESR
0501: TVPEACNVKC EDANAEMKMA EGSLNALRTE KGSVESNSNL QEESNGEIIK PCEAKENREQ PAKKSFTEEE AARIIQSMYR GYDVRRWEPI KKLKEIATVR
0601: EQMGDVKKRI EALEASTDQH IEEKEIVVNG ELVMNLLLKL DAVEGLHPSI REFRKALATE LSSIQDKLDS LKNSCASAEK EAVKEQVEIK SQPSDSPVNL
0701: EHSQLTEENK MVSDTNLEKV LRLSPEEHPM SVLNRTDEKQ AESAAETEEG YGLFETLATD SKQATENAAA ASSTTIPEKI GEVETVVPGN PPSADGNGMT
0801: VTNVEENKAM VVESLEEPIN ELPQMVEETE TNSIRDPENA SEVSEAETNS SENENRKGED DIVLHSEKNV ELSELPVGVI DEETQPLSQD PSSSYTREGN
0901: MTAMDPKTAS QEETEVDHSP NNSKGIGQQT SEPQDEKEQS PETEVIVKEQ PLETEVILNE QAPEPEITEP GISKETKKLM EENQRFKETM ETLVKAGREQ
1001: LEVISKLTSR VKSLEKKLSH KKKTQIRRRA SKPMSVSPTD AVL

Arabidopsis Description

BAG6BAG family molecular chaperone regulator 6 [Source:UniProtKB/Swiss-Prot;Acc:O82345]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.