CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
KRG89812
KRG94975
KRH18664

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G46240.1	KRG89812	AT3G56800.1	16003391
AT2G46240.1	KRG94975	AT3G56800.1	16003391
AT2G46240.1	KRH18664	AT3G56800.1	16003391
AT2G46240.1	KRG89812	AT5G21274.1	16003391
AT2G46240.1	KRG94975	AT5G21274.1	16003391
AT2G46240.1	KRH18664	AT5G21274.1	16003391

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH00024	Soybean	nucleus	73.88	62.89
KRH65782	Soybean	cytosol	49.48	52.96
KRH47996	Soybean	cytosol	71.63	35.63
KRH06550	Soybean	nucleus	48.27	24.05
CDX80000	Canola	nucleus	10.03	11.35
Zm00001d048489_P001	Maize	cytosol, nucleus, plastid	5.36	10.4
Bra004553.1-P	Field mustard	nucleus	11.25	9.69
Zm00001d045678_P001	Maize	cytosol	9.69	8.56
GSMUA_Achr10P...	Banana	nucleus	11.76	8.03
TraesCS4B01G382700.2	Wheat	cytosol	14.71	7.81
AT2G46240.1	Thale cress	cytosol	14.01	7.77
CDY42022	Canola	nucleus	12.11	7.69
Solyc01g095320.2.1	Tomato	nucleus	12.11	7.2
PGSC0003DMT400000246	Potato	nucleus	15.4	7.18
Os02t0259900-01	Rice	cytosol, nucleus	5.36	7.0
TraesCS4D01G357900.7	Wheat	cytosol	15.92	6.97
TraesCS7B01G388700.4	Wheat	nucleus	15.57	6.83
Zm00001d016070_P004	Maize	nucleus	15.22	6.75
OQU84742	Sorghum	nucleus	15.57	6.53
TraesCS5A01G548000.4	Wheat	cytosol	14.71	6.48
VIT_15s0046g01560.t01	Wine grape	nucleus	13.49	6.48
HORVU4Hr1G090660.1	Barley	cytosol	14.36	6.3
Zm00001d005246_P001	Maize	nucleus	4.15	6.19
Zm00001d046131_P001	Maize	nucleus	3.11	6.04
Os02t0259850-00	Rice	nucleus	2.42	5.58

Protein Annotations

EMBL:ACUP02000534	EnsemblPlants:KRH75967	EnsemblPlantsGene:GLYMA_01G121200	GO:GO:0005575	GO:GO:0006457	GO:GO:0008150
GO:GO:0009266	GO:GO:0009506	GO:GO:0009605	GO:GO:0009607	GO:GO:0009628	GO:GO:0009987
GO:GO:0043207	PANTHER:PTHR33322	PANTHER:PTHR33322:SF4	ProteinID:KRH75967	ProteinID:KRH75967.1	SEG:seg
UniParc:UPI00023BEE1E	UniProt:K7K3D7	MapMan:35.2	:	:	:

Description

hypothetical protein

Coordinates

chr1:-:41625488..41627441

Molecular Weight (calculated)

63879.5 Da

IEP (calculated)

4.076

GRAVY (calculated)

-0.975

Length

578 amino acids

Sequence
(BLAST)

001: MHAPINHIDD TYATWHLHLH TEFVPSNDTQ KEETPEMVAE EAISADDKDT ETLAQEKTEV SAAPPALQEK NGHGSSSSRS PSPPPSKGNS QATTGETFKT
101: PVSGTRDKAQ PNLNHQNAPN TSEKVKPKEN TIPVSECMTN ENKGGLHPSF REIRKSLARE LIILQERLDS IIAKKRQQQM PDADVQEHVE ITLMNMQSEE
201: HVQKQQEEKV AVPEDSAEGT RDDVKGPCAN DGGSESQSPV DPPSNEGAES VALPNGSDNE DTSQVVASDA LNSSSDLSES DKMAVESEAK SEAKDNPIAE
301: DIPIEVDKLD KTVWEELPVG VIDEDINDVS IEREEHDDVR SGSLPAMVND SAQEGSDSEN YAMMELPLGL HEEHERDNEM NISNGETRSE NEIFIEELPV
401: GLHDEDTAIS KDKRDDQAKP KTYKEVLLAQ EGECNADEET SSSTDDTANE TQLEQQQKLK EQEKVHSSRV KIEYPEEGEL NGDAPMDIRV ECKSGEEAGT
501: DTKLLPLTTQ VSDNEPENED VFSEANYVNN KLTEPMEFVP SNDTQKEETP EMVAEGAISA DDKYFRCFWY SPLIRIGV

Best Arabidopsis Sequence Match ( AT2G46240.1 )
(BLAST)

0001: MMPVYMDPSQ PCQMRPQEYY YQGFGNNSQH MAMDAPPPCH GSCVHGNFPA YWPPCYPPQV PYHQCCMNRS AFHPPHASYA PSCYVHPPFP VGYQPWFDVE
0101: KDVPGKHHCG KCSSQMCDLK KDRGVVIEEH EPEIEKGEAV LPVRSTNCPY PIIWIPHENA RNQEYRSSLG LGKHNQPPAE VRAPDNMTIQ KSFPESWRGC
0201: FPFDESSMKS LVQNQDSKKA QNGKTVEAPF DISKFKSLLQ GQDMKEAQIQ KNKEELGQLT YPTSWVPSRR KRDDVEASES SNEDRKKMQN GKTVEYPFDI
0301: SMIKSLIQGQ DVKEAQNQKN KEEPGQVPYP IFWIPSYGKR KDVEASESKE SSNEGRNLES CPSDLHRNEG QITQAKGKEG NFECNVLSDA EEKSSVINIP
0401: VANHLQEPRN IPVKLSENHL PKPTEPTKRI AKNEPVKSTK KEQSSSSSEA SKLPPVCLRV DPLPKERNGG SKSVSHPKRM EKSKETKIAA PLSSKKAESR
0501: TVPEACNVKC EDANAEMKMA EGSLNALRTE KGSVESNSNL QEESNGEIIK PCEAKENREQ PAKKSFTEEE AARIIQSMYR GYDVRRWEPI KKLKEIATVR
0601: EQMGDVKKRI EALEASTDQH IEEKEIVVNG ELVMNLLLKL DAVEGLHPSI REFRKALATE LSSIQDKLDS LKNSCASAEK EAVKEQVEIK SQPSDSPVNL
0701: EHSQLTEENK MVSDTNLEKV LRLSPEEHPM SVLNRTDEKQ AESAAETEEG YGLFETLATD SKQATENAAA ASSTTIPEKI GEVETVVPGN PPSADGNGMT
0801: VTNVEENKAM VVESLEEPIN ELPQMVEETE TNSIRDPENA SEVSEAETNS SENENRKGED DIVLHSEKNV ELSELPVGVI DEETQPLSQD PSSSYTREGN
0901: MTAMDPKTAS QEETEVDHSP NNSKGIGQQT SEPQDEKEQS PETEVIVKEQ PLETEVILNE QAPEPEITEP GISKETKKLM EENQRFKETM ETLVKAGREQ
1001: LEVISKLTSR VKSLEKKLSH KKKTQIRRRA SKPMSVSPTD AVL

Arabidopsis Description

BAG6BAG family molecular chaperone regulator 6 [Source:UniProtKB/Swiss-Prot;Acc:O82345]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.