Factsheet for Os01t0384300-00

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 5
endoplasmic reticulum 5
vacuole 6
plasma membrane 8
golgi 5
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	nucleus, secretory
BaCelLo:	secretory
EpiLoc:	plasma membrane
iPSORT:	secretory
MultiLoc:	vacuole
Plant-mPloc:	nucleus
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

plasma membrane: 18260611
plasma membrane: 27800704

msms PMID: 27800704 doi

J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu

Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.

msms PMID: 18260611 doi

SH Natera, KL Ford, AM Cassin, JH Patterson, EJ Newbigin, A Bacic

Plant Cell Biology Research Centre, VIC, Australia. s.natera@unimelb.edu.au

PPI

Inferred distinct locusB in Crop

locusB	locations
Os01t0267900-01
Os01t0279300-01
Os01t0810300-01
Os03t0319300-01
Os03t0743500-02
Os05t0491000-01
Os05t0491100-01
Os07t0687200-02
Os12t0603800-00

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G48010.1	Os01t0267900-01	AT2G41090.1	17360592
AT2G48010.1	Os01t0279300-01	AT2G41090.1	17360592
AT2G48010.1	Os01t0810300-01	AT2G41090.1	17360592
AT2G48010.1	Os03t0319300-01	AT2G41090.1	17360592
AT2G48010.1	Os05t0491000-01	AT2G41090.1	17360592
AT2G48010.1	Os05t0491100-01	AT2G41090.1	17360592
AT2G48010.1	Os07t0687200-02	AT2G41090.1	17360592
AT2G48010.1	Os12t0603800-00	AT2G41090.1	17360592
AT2G48010.1	Os03t0743500-02	AT4G14640.1	17360592
AT2G48010.1	Os01t0267900-01	AT5G21274.1	17360592
AT2G48010.1	Os01t0279300-01	AT5G21274.1	17360592
AT2G48010.1	Os01t0810300-01	AT5G21274.1	17360592
AT2G48010.1	Os03t0319300-01	AT5G21274.1	17360592
AT2G48010.1	Os05t0491000-01	AT5G21274.1	17360592
AT2G48010.1	Os05t0491100-01	AT5G21274.1	17360592
AT2G48010.1	Os07t0687200-02	AT5G21274.1	17360592
AT2G48010.1	Os12t0603800-00	AT5G21274.1	17360592

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4D01G106700.1	Wheat	plasma membrane	79.38	80.38
TraesCS4A01G205800.1	Wheat	plasma membrane	79.06	80.06
HORVU4Hr1G019460.1	Barley	plasma membrane	77.97	79.21
TraesCS4B01G109400.1	Wheat	plasma membrane	75.31	79.15
KXG29404	Sorghum	plasma membrane	78.28	78.53
Zm00001d015163_P001	Maize	plasma membrane	63.91	76.16
KRH67133	Soybean	cytosol	31.09	65.46
GSMUA_Achr8P33610_001	Banana	plastid	33.91	63.27
PGSC0003DMT400095174	Potato	cytosol	25.16	61.22
CDX79672	Canola	plasma membrane	50.0	51.61
AT2G48010.1	Thale cress	plasma membrane	49.69	51.54
Bra023063.1-P	Field mustard	plasma membrane	50.16	51.52
CDX84563	Canola	plasma membrane	50.16	51.52
KRH71493	Soybean	plasma membrane	50.16	51.36
KRH31961	Soybean	plasma membrane	50.16	51.03
VIT_07s0104g00840.t01	Wine grape	plasma membrane	51.09	49.92
VIT_14s0030g00350.t01	Wine grape	cytosol	42.19	49.36
KRG95456	Soybean	plasma membrane	44.22	49.13
Solyc09g074240.1.1	Tomato	plasma membrane	48.75	48.9
KRG95455	Soybean	plasma membrane	47.66	47.96
KRH67131	Soybean	plasma membrane	47.19	46.75
Os05t0423500-01	Rice	plasma membrane	32.97	32.76
Os01t0883000-00	Rice	plasma membrane	35.31	26.84
Os01t0883200-01	Rice	nucleus	6.72	10.62

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.23	Gene3D:3.30.200.20	EntrezGene:4325430	ProteinID:BAC06279.1	ProteinID:BAS72251.1
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0005488
GO:GO:0005524	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0006464	GO:GO:0006468
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016301
GO:GO:0016310	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	EnsemblPlantsGene:Os01g0384300
EnsemblPlants:Os01t0384300-00	PFAM:PF00069	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27006
PANTHER:PTHR27006:SF36	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	UniProt:Q8LI83	SMART:SM00220	SUPFAM:SSF56112
InterPro:Ser/Thr_kinase_AS	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI00000AB0D0	RefSeq:XP_015629504.1	SEG:seg

Description

Similar to RKF3 (RECEPTOR-LIKE KINASE IN IN FLOWERS 3); kinase. (Os01t0384300-00)

Coordinates

chr1:+:16086670..16088900

Molecular Weight (calculated)

67661.4 Da

IEP (calculated)

6.950

GRAVY (calculated)

0.161

Length

640 amino acids

Sequence
(BLAST)

001: MSSSLPSPLL FLLLLLPFPA AVRSQPAAAP APQQQCPLNF TALRPFLAQP LPPDDSARCL LAVQSVRLLL ALHLAATGSF VLPANSSCLP PLRAELPFAL
101: PSPSACGLQG LDALLASPGC ANVSTLGDFD AAVPPSSRAD MNASCNRDLT PVPDCTSCTT SLSKAAAAYL LPGSPNDGGN NVTGCVQYPF IYAGAAASPR
201: GADDPATANC LYLLKVNSAS KASSSVPGWV YGVVFGCVAM VLLVAAAAAS WFLVRRRRRR AAAAALAKAA ADSRSKRSQA MESISASTTL VQFTYDEIKA
301: ATGGFARESI IGRGGFGNVY KGVLPDGAEV AVKRFKNCSA AGDAAFAHEV EVVASVRHVN LVAIRGYCIA TTEREGHQRM IVCDLMHNGS LHDHLFGAGE
401: CQMTWPVRQR IAIGMARGLA YLHRGAQPAI IHRDIKASNI LLDDDFEAMV ADFGLAKFAP EGMTHVSTRV AGTLGYVAPE YALYGQLTEK SDVYSFGVVL
501: LELLSGKRAF ISLGEGQNFV LSEWAWLLVR RGKTVDVIQE GMVEPGPTEV MEKYVLVAAL CTHPQLHARP TMDQVVKILE ADSASGPLII PERPLPVVAN
601: LAEIERSASS SGSGQLFSPS GFRSFTHINE DAALESPKEE

Best Arabidopsis Sequence Match ( AT2G48010.1 )
(BLAST)

001: MLFLRRIAVV FFVFTSFSAA QNSTCPLDFS VLEPFRRPKP DGATTCQYLL QGLRLLYSHH LRQTGSFLPP PESAASCWAA LQSSVAGFLP RFDVRSTCGF
101: QTPWISQGCM DITTRSQFES LIPNSSLATT AMRCNTSLES NTPCASCTQS LSAFQPYLSG PSLGNVSDCA SFPSIYAAAF ANSLGPTDKG TAKCLFQLDL
201: ASPTSSGANK VKVLVSSFSV LLVASVLVIT AWFWYCRRKK SKLLKPRDTS LEAGTQSRLD SMSESTTLVK FSFDEIKKAT NNFSRHNIIG RGGYGNVFKG
301: ALPDGTQVAF KRFKNCSAGG DANFAHEVEV IASIRHVNLL ALRGYCTATT PYEGHQRIIV CDLVSNGSLH DHLFGDLEAQ LAWPLRQRIA LGMARGLAYL
401: HYGAQPSIIH RDIKASNILL DERFEAKVAD FGLAKFNPEG MTHMSTRVAG TMGYVAPEYA LYGQLTEKSD VYSFGVVLLE LLSRRKAIVT DEEGQPVSVA
501: DWAWSLVREG QTLDVVEDGM PEKGPPEVLE KYVLIAVLCS HPQLHARPTM DQVVKMLESN EFTVIAIPQR PIPLVACREE IDRSVSSSSG SGKLTSPTGY
601: QAFSFGGDGP SGNTNTT

Arabidopsis Description

RKF3Probable LRR receptor-like serine/threonine-protein kinase RKF3 [Source:UniProtKB/Swiss-Prot;Acc:P93050]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.