CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 5
endoplasmic reticulum 5
vacuole 5
plasma membrane 9
golgi 5
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	plastid, secretory
BaCelLo:	secretory
ChloroP:	plastid
EpiLoc:	plasma membrane
iPSORT:	secretory
MultiLoc:	plasma membrane
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

Inferred distinct locusB in Crop

locusB	locations
KRG89812
KRG94975
KRH18664
KRH31638
KRH69070

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G48010.1	KRG89812	AT2G41090.1	17360592
AT2G48010.1	KRG94975	AT2G41090.1	17360592
AT2G48010.1	KRH18664	AT2G41090.1	17360592
AT2G48010.1	KRH31638	AT4G14640.1	17360592
AT2G48010.1	KRH69070	AT4G14640.1	17360592
AT2G48010.1	KRG89812	AT5G21274.1	17360592
AT2G48010.1	KRG94975	AT5G21274.1	17360592
AT2G48010.1	KRH18664	AT5G21274.1	17360592

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH71493	Soybean	plasma membrane	89.19	89.76
KRH67133	Soybean	cytosol	37.04	76.64
PGSC0003DMT400095174	Potato	cytosol	29.41	70.34
KRG95455	Soybean	plasma membrane	64.71	63.99
KRH67131	Soybean	plasma membrane	64.07	62.38
KRG95456	Soybean	plasma membrane	56.6	61.81
Solyc09g074240.1.1	Tomato	plasma membrane	61.05	60.19
AT2G48010.1	Thale cress	plasma membrane	58.98	60.13
Bra023063.1-P	Field mustard	plasma membrane	59.46	60.03
CDX84563	Canola	plasma membrane	59.46	60.03
GSMUA_Achr8P33610_001	Banana	plastid	32.59	59.77
CDX79672	Canola	plasma membrane	58.82	59.68
VIT_07s0104g00840.t01	Wine grape	plasma membrane	60.25	57.86
TraesCS4B01G109400.1	Wheat	plasma membrane	48.81	50.41
TraesCS4D01G106700.1	Wheat	plasma membrane	50.56	50.32
TraesCS4A01G205800.1	Wheat	plasma membrane	50.4	50.16
Os01t0384300-00	Rice	plasma membrane	51.03	50.16
HORVU4Hr1G019460.1	Barley	plasma membrane	49.6	49.52
KXG29404	Sorghum	plasma membrane	49.28	48.59
Zm00001d015163_P001	Maize	plasma membrane	36.25	42.46
KRH59164	Soybean	plasma membrane	26.55	34.72
KRH17996	Soybean	plasma membrane	33.55	34.42
KRH17995	Soybean	plasma membrane	33.39	34.04
KRH17993	Soybean	plasma membrane	30.68	33.28
KRH44057	Soybean	plasma membrane	34.66	32.98
KRH10412	Soybean	plasma membrane	33.86	32.82
KRH43048	Soybean	plasma membrane	33.23	31.62

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:100800760	MapMan:18.4.1.23	Gene3D:3.30.200.20	EMBL:ACUP02006091	EnsemblPlantsGene:GLYMA_10G023400
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0005488
GO:GO:0005524	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0006464	GO:GO:0006468
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016301
GO:GO:0016740	GO:GO:0019538	UniProt:I1L805	InterPro:IPR000719	EnsemblPlants:KRH31961	ProteinID:KRH31961
ProteinID:KRH31961.1	InterPro:Kinase-like_dom_sf	PFAM:PF00069	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011
PANTHER:PTHR27006	PANTHER:PTHR27006:SF36	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112
InterPro:Ser/Thr_kinase_AS	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI000233C66F	SEG:seg	:

Description

hypothetical protein

Coordinates

chr10:+:2035663..2038899

Molecular Weight (calculated)

69177.3 Da

IEP (calculated)

7.987

GRAVY (calculated)

-0.116

Length

629 amino acids

Sequence
(BLAST)

001: MSSLIHLFLF FFFFLCLSHS SLCDTCPLNF TILGRTKPTS FDTSRCQVIS QALRLVQSDY LRRSGFFLPP LNASDTCWTH FQSYVNNFDQ TYNITTSCGF
101: KTSWISQGCN NVTTKQDFES LVPQSALQNM RNNCNQSLEN NSPCALCTTS FSTLPPLGDS VGNLTYCTKY ASIYAAAFAN RFGPSDPGTA KCLFSLQFSS
201: NNNNNSSSSS KRKKVVIAVV SVVGVLVVLL LVLGVWVYCK LEDKVAGDKD VRVAEIGLVS GLDSMEQSTT LIRFTFDDIK KATKNFSRDN IVGRGGYGNV
301: YKGLLPDGSE VAFKRFKNCS ASGDASFTHE VEVIASVRHV NLVALRGYCS VTTRLEGYQR IIVCDMVKNG SLHDHLFGSN GVKLSWPIRQ KIALGTARGL
401: AYLHYGAQPA IIHRDIKASN ILLDDKFEAK VADFGLAKFN PEGMTHMSTR VAGTMGYVAP EYALYGQLTE RSDVFSFGVV LLELLSGRKA LQMNNDGQPS
501: SLTDWAWSLV RTGKALDVIE DGMPQSGSEH VLEKYVLIAV LCSHPQLYAR PTMDQVVKMM ETDESVPSIP ERPIPLVAGR LDIERSVSSS GSGQLSSPTG
601: YRSYTIESDR QSSNSRDERS SSSRILSTD

Best Arabidopsis Sequence Match ( AT2G48010.1 )
(BLAST)

001: MLFLRRIAVV FFVFTSFSAA QNSTCPLDFS VLEPFRRPKP DGATTCQYLL QGLRLLYSHH LRQTGSFLPP PESAASCWAA LQSSVAGFLP RFDVRSTCGF
101: QTPWISQGCM DITTRSQFES LIPNSSLATT AMRCNTSLES NTPCASCTQS LSAFQPYLSG PSLGNVSDCA SFPSIYAAAF ANSLGPTDKG TAKCLFQLDL
201: ASPTSSGANK VKVLVSSFSV LLVASVLVIT AWFWYCRRKK SKLLKPRDTS LEAGTQSRLD SMSESTTLVK FSFDEIKKAT NNFSRHNIIG RGGYGNVFKG
301: ALPDGTQVAF KRFKNCSAGG DANFAHEVEV IASIRHVNLL ALRGYCTATT PYEGHQRIIV CDLVSNGSLH DHLFGDLEAQ LAWPLRQRIA LGMARGLAYL
401: HYGAQPSIIH RDIKASNILL DERFEAKVAD FGLAKFNPEG MTHMSTRVAG TMGYVAPEYA LYGQLTEKSD VYSFGVVLLE LLSRRKAIVT DEEGQPVSVA
501: DWAWSLVREG QTLDVVEDGM PEKGPPEVLE KYVLIAVLCS HPQLHARPTM DQVVKMLESN EFTVIAIPQR PIPLVACREE IDRSVSSSSG SGKLTSPTGY
601: QAFSFGGDGP SGNTNTT

Arabidopsis Description

RKF3Probable LRR receptor-like serine/threonine-protein kinase RKF3 [Source:UniProtKB/Swiss-Prot;Acc:P93050]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.