CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 5
endoplasmic reticulum 5
vacuole 5
plasma membrane 9
golgi 5
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	secretory
ChloroP:	plastid
EpiLoc:	cytosol
iPSORT:	secretory
MultiLoc:	plasma membrane
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

Inferred distinct locusB in Crop

locusB	locations
KRG89812
KRG94975
KRH18664
KRH31638
KRH69070

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G48010.1	KRG89812	AT2G41090.1	17360592
AT2G48010.1	KRG94975	AT2G41090.1	17360592
AT2G48010.1	KRH18664	AT2G41090.1	17360592
AT2G48010.1	KRH31638	AT4G14640.1	17360592
AT2G48010.1	KRH69070	AT4G14640.1	17360592
AT2G48010.1	KRG89812	AT5G21274.1	17360592
AT2G48010.1	KRG94975	AT5G21274.1	17360592
AT2G48010.1	KRH18664	AT5G21274.1	17360592

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH31961	Soybean	plasma membrane	89.76	89.19
KRH67133	Soybean	cytosol	37.28	76.64
PGSC0003DMT400095174	Potato	cytosol	29.6	70.34
KRG95455	Soybean	plasma membrane	64.64	63.52
KRH67131	Soybean	plasma membrane	64.16	62.07
KRG95456	Soybean	plasma membrane	56.64	61.46
Solyc09g074240.1.1	Tomato	plasma membrane	61.44	60.19
GSMUA_Achr8P33610_001	Banana	plastid	32.8	59.77
Bra023063.1-P	Field mustard	plasma membrane	59.04	59.23
CDX84563	Canola	plasma membrane	59.04	59.23
CDX79672	Canola	plasma membrane	58.56	59.03
AT2G48010.1	Thale cress	plasma membrane	57.76	58.51
VIT_07s0104g00840.t01	Wine grape	plasma membrane	60.64	57.86
TraesCS4D01G106700.1	Wheat	plasma membrane	51.2	50.63
TraesCS4B01G109400.1	Wheat	plasma membrane	49.28	50.57
TraesCS4A01G205800.1	Wheat	plasma membrane	51.04	50.47
Os01t0384300-00	Rice	plasma membrane	51.36	50.16
HORVU4Hr1G019460.1	Barley	plasma membrane	50.24	49.84
KXG29404	Sorghum	plasma membrane	50.08	49.06
Zm00001d015163_P001	Maize	plasma membrane	36.32	42.27
KRH59164	Soybean	plasma membrane	26.72	34.72
KRH17995	Soybean	plasma membrane	33.76	34.2
KRH17996	Soybean	plasma membrane	32.96	33.61
KRH17993	Soybean	plasma membrane	30.56	32.93
KRH10412	Soybean	plasma membrane	33.6	32.36
KRH44057	Soybean	plasma membrane	33.44	31.62
KRH43048	Soybean	plasma membrane	32.96	31.16

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:100794233	MapMan:18.4.1.23	Gene3D:3.30.200.20	EMBL:ACUP02000900	EnsemblPlantsGene:GLYMA_02G150600
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0005488
GO:GO:0005524	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0006464	GO:GO:0006468
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016301
GO:GO:0016740	GO:GO:0019538	UniProt:I1JFE0	InterPro:IPR000719	EnsemblPlants:KRH71493	ProteinID:KRH71493
ProteinID:KRH71493.1	InterPro:Kinase-like_dom_sf	PFAM:PF00069	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011
PANTHER:PTHR27006	PANTHER:PTHR27006:SF36	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112
InterPro:Ser/Thr_kinase_AS	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI0002336E64	SEG:seg	:

Description

hypothetical protein

Coordinates

chr2:-:15507498..15509859

Molecular Weight (calculated)

68685.8 Da

IEP (calculated)

7.368

GRAVY (calculated)

-0.090

Length

625 amino acids

Sequence
(BLAST)

001: MISLFHLFLF LSLPLSCLCD TCPLNFTILG STKPSSFDTS RCQVISQSLR LVLSDYLRRS GFFLPPLNAS DTCWTHFQSY VNNFDPTYNI TSSCGFQTSW
101: ISQGCNNVTT KQDFESLVPQ PSLQNIRNNC NQSLENNSPC ALCTSSFSPL PPLGDSVGNL THCTDYAFIY AAAFANRFGP SDPGTAKCLF SLQFSSNNNN
201: SSSKRKKVII AVVSVVCVLV VLLLALWVWV YCKLEDKVLA GDKDVRVSEI SLVSGLDSME QSTTLIRFTF DDIKKATKNF SRDNIVGRGG YGNVYKGLLP
301: DGSEVAFKRF KNCSASGDAS FTHEVEVIAS VRHVNLVALR GYCSVTTRLE GYQRIIVCDM VKNGSLHDHL FGSNGMKLSW PIRQKIALGT ARGLAYLHYG
401: AQPAIIHRDI KASNILLDDK FEAKVADFGL AKFNPEGMTH MSTRVAGTMG YVAPEYALYG QLTERSDVFS FGVVLLELLS GRKALQMNND GQPSALTDWA
501: WSLVRTGKAL SVIEDGMPQP GSEQVLEKYV LIAVLCSHPQ LYARPTMDQV VKMMETDESV PSIPERPIPL VAGRLDIERS VSSSGSGQLS SPTGYQSYTI
601: ESDRQSSNSR DERSSSSSSR ILSTD

Best Arabidopsis Sequence Match ( AT2G48010.1 )
(BLAST)

001: MLFLRRIAVV FFVFTSFSAA QNSTCPLDFS VLEPFRRPKP DGATTCQYLL QGLRLLYSHH LRQTGSFLPP PESAASCWAA LQSSVAGFLP RFDVRSTCGF
101: QTPWISQGCM DITTRSQFES LIPNSSLATT AMRCNTSLES NTPCASCTQS LSAFQPYLSG PSLGNVSDCA SFPSIYAAAF ANSLGPTDKG TAKCLFQLDL
201: ASPTSSGANK VKVLVSSFSV LLVASVLVIT AWFWYCRRKK SKLLKPRDTS LEAGTQSRLD SMSESTTLVK FSFDEIKKAT NNFSRHNIIG RGGYGNVFKG
301: ALPDGTQVAF KRFKNCSAGG DANFAHEVEV IASIRHVNLL ALRGYCTATT PYEGHQRIIV CDLVSNGSLH DHLFGDLEAQ LAWPLRQRIA LGMARGLAYL
401: HYGAQPSIIH RDIKASNILL DERFEAKVAD FGLAKFNPEG MTHMSTRVAG TMGYVAPEYA LYGQLTEKSD VYSFGVVLLE LLSRRKAIVT DEEGQPVSVA
501: DWAWSLVREG QTLDVVEDGM PEKGPPEVLE KYVLIAVLCS HPQLHARPTM DQVVKMLESN EFTVIAIPQR PIPLVACREE IDRSVSSSSG SGKLTSPTGY
601: QAFSFGGDGP SGNTNTT

Arabidopsis Description

RKF3Probable LRR receptor-like serine/threonine-protein kinase RKF3 [Source:UniProtKB/Swiss-Prot;Acc:P93050]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.