CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 5
endoplasmic reticulum 5
vacuole 5
plasma membrane 9
golgi 5
plastid 2
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	nucleus, plastid, secretory
BaCelLo:	secretory
ChloroP:	plastid
EpiLoc:	plasma membrane
iPSORT:	secretory
MultiLoc:	plasma membrane
Plant-mPloc:	nucleus, plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

Inferred distinct locusB in Crop

locusB	locations
KRG89812
KRG94975
KRH18664
KRH31638
KRH69070

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G48010.1	KRG89812	AT2G41090.1	17360592
AT2G48010.1	KRG94975	AT2G41090.1	17360592
AT2G48010.1	KRH18664	AT2G41090.1	17360592
AT2G48010.1	KRH31638	AT4G14640.1	17360592
AT2G48010.1	KRH69070	AT4G14640.1	17360592
AT2G48010.1	KRG89812	AT5G21274.1	17360592
AT2G48010.1	KRG94975	AT5G21274.1	17360592
AT2G48010.1	KRH18664	AT5G21274.1	17360592

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH67133	Soybean	cytosol	46.7	88.49
PGSC0003DMT400095174	Potato	cytosol	28.82	63.12
KRH67131	Soybean	plasma membrane	68.06	60.68
KRG95455	Soybean	plasma membrane	65.45	59.28
KRH71493	Soybean	plasma membrane	61.46	56.64
KRH31961	Soybean	plasma membrane	61.81	56.6
Bra023063.1-P	Field mustard	plasma membrane	57.81	53.45
CDX84563	Canola	plasma membrane	57.81	53.45
Solyc09g074240.1.1	Tomato	plasma membrane	59.2	53.45
CDX79672	Canola	plasma membrane	57.29	53.23
AT2G48010.1	Thale cress	plasma membrane	56.77	53.0
GSMUA_Achr8P33610_001	Banana	plastid	30.21	50.73
VIT_07s0104g00840.t01	Wine grape	plasma membrane	56.42	49.62
TraesCS4B01G109400.1	Wheat	plasma membrane	50.0	47.29
TraesCS4A01G205800.1	Wheat	plasma membrane	50.0	45.57
TraesCS4D01G106700.1	Wheat	plasma membrane	49.83	45.41
HORVU4Hr1G019460.1	Barley	plasma membrane	49.13	44.92
KXG29404	Sorghum	plasma membrane	49.13	44.36
Os01t0384300-00	Rice	plasma membrane	49.13	44.22
Zm00001d015163_P001	Maize	plasma membrane	34.9	37.43
KRH17996	Soybean	plasma membrane	33.51	31.48
KRH10412	Soybean	plasma membrane	35.24	31.28
KRH17995	Soybean	plasma membrane	32.99	30.79
KRH59164	Soybean	plasma membrane	25.69	30.77
KRH17993	Soybean	plasma membrane	30.73	30.52
KRH44057	Soybean	plasma membrane	34.72	30.26
KRH43048	Soybean	plasma membrane	32.81	28.59

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:100819980	MapMan:18.4.1.23	Gene3D:3.30.200.20	EMBL:ACUP02012113	EnsemblPlantsGene:GLYMA_19G152300
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0005488
GO:GO:0005524	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0006464	GO:GO:0006468
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016301
GO:GO:0016740	GO:GO:0019538	UniProt:I1N9D6	InterPro:IPR000719	EnsemblPlants:KRG95456	ProteinID:KRG95456
ProteinID:KRG95456.1	InterPro:Kinase-like_dom_sf	PFAM:PF00069	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011
PANTHER:PTHR27006	PANTHER:PTHR27006:SF36	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112
InterPro:Ser/Thr_kinase_AS	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI000233EFED	SEG:seg	:

Description

hypothetical protein

Coordinates

chr19:+:41273685..41275823

Molecular Weight (calculated)

63198.7 Da

IEP (calculated)

8.369

GRAVY (calculated)

-0.015

Length

576 amino acids

Sequence
(BLAST)

001: MPLFVFLATI FLTLPTLSLS VTSCLLNTTL LRSRPSSSVD SATRCRYILQ TIRVLQSDYL HRTGFFFPPS SSSFSCWNTL QSSINQYDIR SSCNLPSSSI
101: SLSCNNITTK SQFENSLPNS ALKPVWSTCN QSLKSSLACS QCNKTLSKLD SFLTEPSTGE LVDCKAIASI YAASFSDPQD SGTANCLFNF GFSSSVSSGK
201: RRNIPVVVFS VLAFFLLVFG ALWAYFRFKQ KQKKKDIGKI EMGLGSGLDS GFDSLNQSTT LIRFTFDEIK KASRNFAGDN IIGKGGYGNV YKGVLFDGTR
301: VALKRFKNCS VAGDASFTHE VEVIASVRHV NLVALRGYCT ATTNLEGHQR IIVTDLMENG SLCDHLFGSA KKKLSWSIRQ KIAFGTARGL AYLHYGAQPS
401: IIHRDIKSSN ILLDHNFEAK VADFGLAKFN PEGMTHMSTR VAGTKGYVAP EYALYGQLTE RSDVFSFGVV LLELLSGKKA LHVDNDGQPS ALTDFAWSLV
501: RNGKALDVIE DGMPELGPIE VLEKYVLVAV LCCHPQLYAR PTMDQVVKML ETEELEQPIS SIAGRIDVDE KSVSSN

Best Arabidopsis Sequence Match ( AT1G01540.2 )
(BLAST)

001: MSVYDAAFLN TELSKPTSIF GLRLWVVIGI LLGSLIVIAL FLLSLCLTSR RKNRKPRADF ASAAIATPPI SKEIKEIVPA QNQSVPAEIQ VDIGKIEHRV
101: VFSDRVSSGE SRGTASASET ASYSGSGNCG PEVSHLGWGR WYTLRELEAA TNGLCEENVI GEGGYGIVYR GILTDGTKVA VKNLLNNRGQ AEKEFKVEVE
201: VIGRVRHKNL VRLLGYCVEG AYRMLVYDFV DNGNLEQWIH GDVGDVSPLT WDIRMNIILG MAKGLAYLHE GLEPKVVHRD IKSSNILLDR QWNAKVSDFG
301: LAKLLGSESS YVTTRVMGTF GYVAPEYACT GMLNEKSDIY SFGILIMEII TGRNPVDYSR PQGETNLVDW LKSMVGNRRS EEVVDPKIPE PPSSKALKRV
401: LLVALRCVDP DANKRPKMGH IIHMLEAEDL LYRDERRTTR DHGSRERQET AVVAAGSESG ESGSRHHQQK QR

Arabidopsis Description

Probable serine/threonine-protein kinase At1g01540 [Source:UniProtKB/Swiss-Prot;Acc:Q3EDL4]
SUBAcon: [plasma membrane,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.