Factsheet for HORVU4Hr1G019460.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 1
extracellular 3
endoplasmic reticulum 3
vacuole 3
plasma membrane 6
golgi 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	plastid, secretory
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	plasma membrane
Predotar:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU0Hr1G001280.1
HORVU2Hr1G016740.4
HORVU3Hr1G038010.1
HORVU3Hr1G079210.4
HORVU4Hr1G026290.3
HORVU5Hr1G014060.1
HORVU5Hr1G014070.2
HORVU5Hr1G044710.4

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G48010.1	HORVU0Hr1G001280.1	AT2G41090.1	17360592
AT2G48010.1	HORVU2Hr1G016740.4	AT2G41090.1	17360592
AT2G48010.1	HORVU3Hr1G038010.1	AT2G41090.1	17360592
AT2G48010.1	HORVU3Hr1G079210.4	AT2G41090.1	17360592
AT2G48010.1	HORVU4Hr1G026290.3	AT2G41090.1	17360592
AT2G48010.1	HORVU5Hr1G014060.1	AT2G41090.1	17360592
AT2G48010.1	HORVU5Hr1G014070.2	AT2G41090.1	17360592
AT2G48010.1	HORVU5Hr1G044710.4	AT2G41090.1	17360592
AT2G48010.1	HORVU0Hr1G001280.1	AT5G21274.1	17360592
AT2G48010.1	HORVU2Hr1G016740.4	AT5G21274.1	17360592
AT2G48010.1	HORVU3Hr1G038010.1	AT5G21274.1	17360592
AT2G48010.1	HORVU3Hr1G079210.4	AT5G21274.1	17360592
AT2G48010.1	HORVU4Hr1G026290.3	AT5G21274.1	17360592
AT2G48010.1	HORVU5Hr1G014060.1	AT5G21274.1	17360592
AT2G48010.1	HORVU5Hr1G014070.2	AT5G21274.1	17360592
AT2G48010.1	HORVU5Hr1G044710.4	AT5G21274.1	17360592

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4D01G106700.1	Wheat	plasma membrane	92.54	92.25
TraesCS4A01G205800.1	Wheat	plasma membrane	92.06	91.77
TraesCS4B01G109400.1	Wheat	plasma membrane	88.25	91.3
Os01t0384300-00	Rice	plasma membrane	79.21	77.97
KXG29404	Sorghum	plasma membrane	76.67	75.71
Zm00001d015163_P001	Maize	plasma membrane	62.06	72.81
KRH67133	Soybean	cytosol	31.75	65.79
GSMUA_Achr8P33610_001	Banana	plastid	34.6	63.56
PGSC0003DMT400095174	Potato	cytosol	26.03	62.36
CDX79672	Canola	plasma membrane	50.48	51.29
CDX84563	Canola	plasma membrane	50.63	51.2
Bra023063.1-P	Field mustard	plasma membrane	50.63	51.2
AT2G48010.1	Thale cress	plasma membrane	49.84	50.89
KRH71493	Soybean	plasma membrane	49.84	50.24
Solyc09g074240.1.1	Tomato	plasma membrane	50.32	49.69
KRH31961	Soybean	plasma membrane	49.52	49.6
VIT_14s0030g00350.t01	Wine grape	cytosol	42.86	49.36
VIT_07s0104g00840.t01	Wine grape	plasma membrane	51.27	49.31
KRG95456	Soybean	plasma membrane	44.92	49.13
KRG95455	Soybean	plasma membrane	45.87	45.44
KRH67131	Soybean	plasma membrane	46.51	45.36
HORVU1Hr1G063610.1	Barley	plasma membrane	33.17	32.5
HORVU3Hr1G090990.2	Barley	plastid	33.02	30.95

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.23	Gene3D:3.30.200.20	UniProt:A0A287NGG0	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005623
GO:GO:0005886	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016020	GO:GO:0016021	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	EnsemblPlantsGene:HORVU4Hr1G019460
EnsemblPlants:HORVU4Hr1G019460.1	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	PFAM:PF00069	ScanProsite:PS00107	ScanProsite:PS00108
PFscan:PS50011	PANTHER:PTHR27006	PANTHER:PTHR27006:SF36	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220
SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI000B4818A5	SEG:seg

Description

No Description!

Coordinates

chrchr4H:+:93624533..93627841

Molecular Weight (calculated)

67315.1 Da

IEP (calculated)

7.617

GRAVY (calculated)

0.109

Length

630 amino acids

Sequence
(BLAST)

001: MSRLLPLLLA FILFPATLHA QPSIAPSPPR CPLNFTALRP FLAPPLPSDD ASRCAFALQS VRLLLSLHLA ATGSFLVPNS SCLPPLRDAL PFPLSPPDAC
101: GLAGIDALLS APGCGNISTR GDFDNRVPAS ARRDINASCY RELGPVPVCT ACTTSLSKTA AAYLLPGSPD GGNDVTGCVQ YPFIYAGAAA SLRGPDDPDT
201: ANCLYLLNVN PEPSNGPGAS AWLYGVVFGC VAFVLLVAAA AGSWFFVWRR RRRAAAAALA ADSRSKRSLA MESITASTTL LKFTYDDIKM ATGSFARDSI
301: IGRGGFGNVY KGVLPDGAEV AVKRFKNCSA AGDAAFAHEV EVVASVRHVN LVALRGYCIA ATQREGHQRM IVCDLMHNGS LHDHLFGAGE CLMAWPVRQR
401: IAIGMARGLS YLHRGTQPAI IHRDIKASNI LLDDDFEAKV ADFGLAKFAP EGMTHVSTRV AGTMGYVAPE YALYGQLTEK SDVYSFGVVL LELLSGKRAF
501: MSLNEGESFV LADWAWSLVR RGKTLDVLQE GMAEPGPTKV MEKYVLVAAL CTHPQLHARP TMEQAVKILE ADSAPGPLII PDRPLPVVAN LAEIERSVSS
601: TGSGQLFSPS GFRSFIHRNE DATRESPKET

Best Arabidopsis Sequence Match ( AT2G48010.1 )
(BLAST)

001: MLFLRRIAVV FFVFTSFSAA QNSTCPLDFS VLEPFRRPKP DGATTCQYLL QGLRLLYSHH LRQTGSFLPP PESAASCWAA LQSSVAGFLP RFDVRSTCGF
101: QTPWISQGCM DITTRSQFES LIPNSSLATT AMRCNTSLES NTPCASCTQS LSAFQPYLSG PSLGNVSDCA SFPSIYAAAF ANSLGPTDKG TAKCLFQLDL
201: ASPTSSGANK VKVLVSSFSV LLVASVLVIT AWFWYCRRKK SKLLKPRDTS LEAGTQSRLD SMSESTTLVK FSFDEIKKAT NNFSRHNIIG RGGYGNVFKG
301: ALPDGTQVAF KRFKNCSAGG DANFAHEVEV IASIRHVNLL ALRGYCTATT PYEGHQRIIV CDLVSNGSLH DHLFGDLEAQ LAWPLRQRIA LGMARGLAYL
401: HYGAQPSIIH RDIKASNILL DERFEAKVAD FGLAKFNPEG MTHMSTRVAG TMGYVAPEYA LYGQLTEKSD VYSFGVVLLE LLSRRKAIVT DEEGQPVSVA
501: DWAWSLVREG QTLDVVEDGM PEKGPPEVLE KYVLIAVLCS HPQLHARPTM DQVVKMLESN EFTVIAIPQR PIPLVACREE IDRSVSSSSG SGKLTSPTGY
601: QAFSFGGDGP SGNTNTT

Arabidopsis Description

RKF3Probable LRR receptor-like serine/threonine-protein kinase RKF3 [Source:UniProtKB/Swiss-Prot;Acc:P93050]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.