Factsheet for VIT_14s0030g00350.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr8P33610_001	Banana	plastid	33.09	52.77
VIT_07s0104g00840.t01	Wine grape	plasma membrane	56.86	47.48
VIT_12s0034g02200.t01	Wine grape	cytosol	20.66	44.14
TraesCS4B01G109400.1	Wheat	plasma membrane	48.81	43.84
HORVU4Hr1G019460.1	Barley	plasma membrane	49.36	42.86
TraesCS4A01G205800.1	Wheat	plasma membrane	48.99	42.41
Os01t0384300-00	Rice	plasma membrane	49.36	42.19
TraesCS4D01G106700.1	Wheat	plasma membrane	48.63	42.09
KXG29404	Sorghum	plasma membrane	48.45	41.54
Zm00001d015163_P001	Maize	plasma membrane	33.27	33.89
VIT_18s0001g01960.t01	Wine grape	plasma membrane	36.01	32.19
VIT_12s0034g02220.t01	Wine grape	plasma membrane	36.01	29.49

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:100258819	wikigene:100258819	MapMan:18.4.1.23	Gene3D:3.30.200.20	ProteinID:CCB58163
ProteinID:CCB58163.1	UniProt:F6HU01	EMBL:FN596249	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005623
GO:GO:0005886	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016020	GO:GO:0016021	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719
InterPro:Kinase-like_dom_sf	EntrezGene:LOC100258819	wikigene:LOC100258819	PFAM:PF00069	ScanProsite:PS00107	ScanProsite:PS00108
PFscan:PS50011	PANTHER:PTHR27006	PANTHER:PTHR27006:SF91	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220
SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	TMHMM:TMhelix	UniParc:UPI0001984934	ArrayExpress:VIT_14s0030g00350	EnsemblPlantsGene:VIT_14s0030g00350
EnsemblPlants:VIT_14s0030g00350.t01	RefSeq:XP_002263855	RefSeq:XP_002263855.2	RefSeq:XP_010660041.1	RefSeq:XP_019080301.1	RefSeq:XP_019080302.1
RefSeq:XP_019080303.1	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr14:-:4193820..4195640

Molecular Weight (calculated)

60148.7 Da

IEP (calculated)

6.502

GRAVY (calculated)

0.069

Length

547 amino acids

Sequence
(BLAST)

001: MVVEGIPRPS FRDVPTQCNY VLEGIRVIRS EYLRTDGYFL PPSSTTKVCW ESYRLLVSDL VSGFDIELAC GYHPEWVSES CMNISSGSEF ESLIPESKLQ
101: EVRCYCNQSL GNSTSCALCK ENLGSLQASY LSGSGIGNAS DCAGYSFMYA AGWVNPYGPT DVATAKCLFS LDFSPHHIRN KRYKILISGA VLGCVIGFFG
201: AFAAAWFLWT RHRKLEREME VCAKMETSLD SGFGSMTGSD TLVKFKFEEI KRATMNFSRE NIIGQGGYGN VYKGILPDGS EVAFKRFKNC SASGDAVFTH
301: EVEVLASVRH MNLVVLRGYC TATVPMEGHQ RIIVCDLMPN GSLHDHLFGS VGKKLSWPIR QNIALGTARG LAYLHYGAQP AIIHRDIKAS NILLDETFEA
401: KVADFGLAKV NPEGITHLST RVAGTLGYVA PEYALFGKLT ERSDVYSFGV VLLELLSGKK AFMAANGPQA LLLTEWAWSL VKEGRPIDVV DEEMPELGLT
501: EVMERHVLIA VLCCHPVLES RPTMDKIVKM LETNLPIPSI LIASAAL

Best Arabidopsis Sequence Match ( AT2G48010.1 )
(BLAST)

001: MLFLRRIAVV FFVFTSFSAA QNSTCPLDFS VLEPFRRPKP DGATTCQYLL QGLRLLYSHH LRQTGSFLPP PESAASCWAA LQSSVAGFLP RFDVRSTCGF
101: QTPWISQGCM DITTRSQFES LIPNSSLATT AMRCNTSLES NTPCASCTQS LSAFQPYLSG PSLGNVSDCA SFPSIYAAAF ANSLGPTDKG TAKCLFQLDL
201: ASPTSSGANK VKVLVSSFSV LLVASVLVIT AWFWYCRRKK SKLLKPRDTS LEAGTQSRLD SMSESTTLVK FSFDEIKKAT NNFSRHNIIG RGGYGNVFKG
301: ALPDGTQVAF KRFKNCSAGG DANFAHEVEV IASIRHVNLL ALRGYCTATT PYEGHQRIIV CDLVSNGSLH DHLFGDLEAQ LAWPLRQRIA LGMARGLAYL
401: HYGAQPSIIH RDIKASNILL DERFEAKVAD FGLAKFNPEG MTHMSTRVAG TMGYVAPEYA LYGQLTEKSD VYSFGVVLLE LLSRRKAIVT DEEGQPVSVA
501: DWAWSLVREG QTLDVVEDGM PEKGPPEVLE KYVLIAVLCS HPQLHARPTM DQVVKMLESN EFTVIAIPQR PIPLVACREE IDRSVSSSSG SGKLTSPTGY
601: QAFSFGGDGP SGNTNTT

Arabidopsis Description

RKF3Probable LRR receptor-like serine/threonine-protein kinase RKF3 [Source:UniProtKB/Swiss-Prot;Acc:P93050]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.