Factsheet for VIT_12s0034g02220.t01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 5
golgi 5
plasma membrane 9
endoplasmic reticulum 5
vacuole 5
plastid 1
cytosol 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	secretory
ChloroP:	plastid
EpiLoc:	cytosol
iPSORT:	secretory
MultiLoc:	plasma membrane
Plant-mPloc:	nucleus, plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_12s0034g02200.t01	Wine grape	cytosol	35.78	93.36
Solyc01g104050.2.1	Tomato	plasma membrane	66.32	68.58
PGSC0003DMT400061181	Potato	plasma membrane	66.32	68.58
KRH10412	Soybean	plasma membrane	65.42	67.33
KRH44057	Soybean	plasma membrane	65.12	65.81
AT1G11050.1	Thale cress	plasma membrane	60.33	64.48
Bra031735.1-P	Field mustard	plasma membrane	57.93	62.02
CDY34865	Canola	plasma membrane	57.63	61.7
CDY34663	Canola	plasma membrane	57.34	61.38
KRH59164	Soybean	plasma membrane	41.92	58.21
VIT_18s0001g01960.t01	Wine grape	plasma membrane	49.4	53.92
KRH43048	Soybean	plasma membrane	52.25	52.8
HORVU1Hr1G063610.1	Barley	plasma membrane	47.75	49.61
TraesCS1A01G264400.1	Wheat	plasma membrane	47.46	49.53
Os05t0423500-01	Rice	plasma membrane	47.6	49.38
TraesCS1B01G275100.1	Wheat	plasma membrane	47.46	49.3
TraesCS1D01G264600.1	Wheat	plasma membrane	47.16	48.99
Zm00001d010234_P001	Maize	plasma membrane	47.46	48.77
GSMUA_Achr11P...	Banana	plasma membrane	40.87	48.66
OQU78028	Sorghum	plasma membrane	47.46	48.4
GSMUA_Achr5P25920_001	Banana	plasma membrane	30.39	48.33
Zm00001d012216_P001	Maize	plasma membrane	45.96	47.45
TraesCS3A01G406600.1	Wheat	plasma membrane	45.36	47.42
TraesCS3D01G401800.1	Wheat	plasma membrane	45.36	47.42
TraesCS3B01G440300.1	Wheat	plasma membrane	45.21	47.26
HORVU3Hr1G090990.2	Barley	plastid	44.46	44.2
EES03987	Sorghum	mitochondrion	45.21	43.9
VIT_14s0030g00350.t01	Wine grape	cytosol	29.49	36.01
Os01t0883000-00	Rice	plasma membrane	44.16	35.04
VIT_07s0104g00840.t01	Wine grape	plasma membrane	31.89	32.52

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:100246443	wikigene:100246443	EntrezGene:100251586	wikigene:100251586	MapMan:18.4.1.23
Gene3D:3.30.200.20	EMBL:AM445288	ProteinID:CAN80735	ProteinID:CAN80735.1	ProteinID:CCB48674	ProteinID:CCB48674.1
UniProt:F6H933	EMBL:FN595497	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672
GO:GO:0004674	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886
GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020
GO:GO:0016021	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719	InterPro:Kinase-like_dom_sf
EntrezGene:LOC100246443	wikigene:LOC100246443	EntrezGene:LOC100251586	wikigene:LOC100251586	PFAM:PF00069	ScanProsite:PS00107
ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27006	PANTHER:PTHR27006:SF29	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS
SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI000210959B
ArrayExpress:VIT_12s0034g02220	EnsemblPlantsGene:VIT_12s0034g02220	EnsemblPlants:VIT_12s0034g02220.t01	RefSeq:XP_002269016	RefSeq:XP_002269016.1	RefSeq:XP_002269065
RefSeq:XP_002269065.2	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr12:+:18567609..18571409

Molecular Weight (calculated)

72233.0 Da

IEP (calculated)

6.612

GRAVY (calculated)

-0.061

Length

668 amino acids

Sequence
(BLAST)

001: MGNGSNFSWA LSLLTTLCLL SVSATTALSQ SSNASACPMD FNYVLRISWN SSNCHNFVSQ GNTSVNSKSS CCTTLLSLFA VSLAQHLKET SLFNLPDVST
101: SQSCLHDFQS KLTSLPLANN LASSCFDPQQ FVIGPDICAG VQNISDWVAK LGPSTALDSS CRADLTDLTA CDACVNAGFE VQSKLIEIDG NKSHSTDCFY
201: FTVLYAAGIV NEAGPESTGA MSCVLAVPLN SDEGSSSKSH SALIFGFTGA GVAVLVMSCL LGLYFWWERK WGKKSKRSGS GFFGVDLEDL GGSRPRVRPN
301: TGSIWFKIPD LERATDNFSQ KNFIGRGGFG LVYKGTLADG STVAVKKIIE SDIQVDADFC NEIEIISNLK HRNLVPLRGC CVVDGGEGYD DRASPRYLVY
401: DYMPNGNLDD HLFSKWENGN GNGMGKKPLT WPQRKSIILD VAKGLAYLHY GVKPAIYHRD IKATNILLDA DMRARVADFG LAKQSREGQS HLTTRVAGTH
501: GYLAPEYALY GQLTEKSDVY SFGVVVLEIM CGRKALDLSS RSPRAFLITD WAWSMVKAGK AEEALDASLV KDGDSSNSNP KAIMERFLLV GILCAHVMVA
601: LRPTISDALK MLEGDVEVPA IPDRPVPLGH PSFLTDGNTF SISPALSGPK LHTGDMLREG RFRGQLQA

Best Arabidopsis Sequence Match ( AT1G11050.1 )
(BLAST)

001: MPNSILFLLL SFLYLTNCVA QSPSQTCPLD FSHVLTIPWN TTDCQKSDKS ADSKNSCCQS LLTLIGIPLA HRLKQTSNFR LPNLATSISC LNNLQTKLSS
101: LSLSSNLTSL CFDPNQFVIN NETCAGIQTT QDWVSRLGPS TALDSACSSG LTDLTRCDAC VAAGFRVQKQ LITLDGNSSH GVYCYHFVVT YAAGIVNKKG
201: PESDDALSCL FSLSLRSPLN SKKKRHTVAL ALGITGAIFG ALVIAGLICL YFRFGKAVKG GEVGWEDQGS RPKWRPNTGS IWFKIEELEK ATNNFSQKNF
301: IGRGGFGFVY KGVLPDGSVI AVKKVIESEF QGDAEFRNEV EIISNLKHRN LVPLRGCSMV DDDSESQRYL VYDYMSNGNL DDHLFPRGET TKMPLSWPQR
401: KSIILDVAKG LAYLHYGVKP AIYHRDIKGT NILLDVDMRA RVADFGLAKQ SREGESHLTT RVAGTHGYLA PEYALYGQLT EKSDVYSFGV VILEIMCGRK
501: ALDLSTSGSP NTFLITDWAW SLVKAGKTEE ALEQSLLREE GSGLSNPKGI MERFLQVGIL CAHVLVALRP TILDALKMLE GDIEVPPIPD RPVPLAHPSY
601: RMDGNGFTIS PALSGLQIHS GDMLR

Arabidopsis Description

Probable receptor-like protein kinase At1g11050 [Source:UniProtKB/Swiss-Prot;Acc:O04086]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.