Factsheet for Solyc09g074240.1.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 5
endoplasmic reticulum 5
vacuole 5
plasma membrane 8
golgi 5
nucleus 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	nucleus, plastid, secretory
BaCelLo:	secretory
EpiLoc:	nucleus
iPSORT:	secretory
MultiLoc:	plasma membrane
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

Inferred distinct locusB in Crop

locusB	locations
Solyc01g008950.2.1
Solyc03g005240.1.1
Solyc06g053930.2.1
Solyc10g077010.1.1
Solyc10g081170.1.1
Solyc11g072240.1.1
Solyc12g099990.1.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G48010.1	Solyc01g008950.2.1	AT2G41090.1	17360592
AT2G48010.1	Solyc10g077010.1.1	AT2G41090.1	17360592
AT2G48010.1	Solyc10g081170.1.1	AT2G41090.1	17360592
AT2G48010.1	Solyc11g072240.1.1	AT2G41090.1	17360592
AT2G48010.1	Solyc12g099990.1.1	AT2G41090.1	17360592
AT2G48010.1	Solyc03g005240.1.1	AT4G14640.1	17360592
AT2G48010.1	Solyc06g053930.2.1	AT4G14640.1	17360592
AT2G48010.1	Solyc01g008950.2.1	AT5G21274.1	17360592
AT2G48010.1	Solyc10g077010.1.1	AT5G21274.1	17360592
AT2G48010.1	Solyc10g081170.1.1	AT5G21274.1	17360592
AT2G48010.1	Solyc11g072240.1.1	AT5G21274.1	17360592
AT2G48010.1	Solyc12g099990.1.1	AT5G21274.1	17360592

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400095174	Potato	cytosol	39.66	96.2
KRH67133	Soybean	cytosol	34.33	72.04
VIT_07s0104g00840.t01	Wine grape	plasma membrane	63.95	62.29
KRH71493	Soybean	plasma membrane	60.19	61.44
AT2G48010.1	Thale cress	plasma membrane	59.25	61.26
KRH31961	Soybean	plasma membrane	60.19	61.05
GSMUA_Achr8P33610_001	Banana	plastid	32.29	60.06
CDX79672	Canola	plasma membrane	58.31	60.0
Bra023063.1-P	Field mustard	plasma membrane	58.31	59.71
CDX84563	Canola	plasma membrane	58.31	59.71
KRG95456	Soybean	plasma membrane	53.45	59.2
KRG95455	Soybean	plasma membrane	57.68	57.86
KRH67131	Soybean	plasma membrane	58.31	57.59
TraesCS4B01G109400.1	Wheat	plasma membrane	48.12	50.41
HORVU4Hr1G019460.1	Barley	plasma membrane	49.69	50.32
TraesCS4A01G205800.1	Wheat	plasma membrane	49.22	49.68
TraesCS4D01G106700.1	Wheat	plasma membrane	48.9	49.37
Os01t0384300-00	Rice	plasma membrane	48.9	48.75
KXG29404	Sorghum	plasma membrane	48.59	48.59
Zm00001d015163_P001	Maize	plasma membrane	35.89	42.64
Solyc01g104050.2.1	Tomato	plasma membrane	33.86	33.44

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.23	Gene3D:3.30.200.20	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005623
GO:GO:0005886	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016020	GO:GO:0016021	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719
UniProt:K4CV01	InterPro:Kinase-like_dom_sf	PFAM:PF00069	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011
PANTHER:PTHR27006	PANTHER:PTHR27006:SF36	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112
InterPro:Ser/Thr_kinase_AS	SignalP:SignalP-noTM	EnsemblPlantsGene:Solyc09g074240.1	EnsemblPlants:Solyc09g074240.1.1	TMHMM:TMhelix	UniParc:UPI000276B37E
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr9:-:66012236..66014152

Molecular Weight (calculated)

70211.2 Da

IEP (calculated)

8.065

GRAVY (calculated)

-0.003

Length

638 amino acids

Sequence
(BLAST)

001: MFPLLHLFIF LCLSFSYCCY GQIINSSSSS CPLDFTSLRK IIDQNSKRPT LNSTAQCQYI RQGLRLVQSE YLRRTNSFFP PMSSADSCWN SYQSLVNDYV
101: QNFDIRSSCG FQTAWISQGC MNITTRFEFE SKVSPAAITN IVSSCNQSLE NNSPCATCTT SLSGLASFLP GPSVGNLFDC AAYPSVYAAA FANQFGPTDK
201: GTAKCLFLLD VSVGSSGKGK KSVVVIVVVV VCVVVFAVVV FGYWFMWRKR KIGLAKKWNT KRLESNLSSR LDSISGSTTL IRYSFDEIKA ATKNFSRLNI
301: VGTGGYGNVY KGVLPGGIEV ALKRFKNCSV AGDANFTHEV EVIASVRHVN LVALRGYCTA TTPFEGHQRI IVCDLMKNGS LHDHLFGTRH EKLSWGIRQK
401: VAIGTARGLA YLHYGAQPGI IHRDIKASNI LLDESFEPKV ADFGLAKFTP EGMTHLSTRV AGTMGYVAPE YALYGQLTER SDVYSFGVVL LELLSGKKAI
501: MEFKDGQPTL VTDWAWSLVR EGRALDVLED SIPHLGPPEV MEKYVLVAVL CSHPELYARP TMDQVVNMLD AEIPVPTIPE RPISLIADLD DIERSVSSGG
601: NSGNLSTAAG YQPYIFERET PLADSDSVRA RTLDQRSR

Best Arabidopsis Sequence Match ( AT2G48010.1 )
(BLAST)

001: MLFLRRIAVV FFVFTSFSAA QNSTCPLDFS VLEPFRRPKP DGATTCQYLL QGLRLLYSHH LRQTGSFLPP PESAASCWAA LQSSVAGFLP RFDVRSTCGF
101: QTPWISQGCM DITTRSQFES LIPNSSLATT AMRCNTSLES NTPCASCTQS LSAFQPYLSG PSLGNVSDCA SFPSIYAAAF ANSLGPTDKG TAKCLFQLDL
201: ASPTSSGANK VKVLVSSFSV LLVASVLVIT AWFWYCRRKK SKLLKPRDTS LEAGTQSRLD SMSESTTLVK FSFDEIKKAT NNFSRHNIIG RGGYGNVFKG
301: ALPDGTQVAF KRFKNCSAGG DANFAHEVEV IASIRHVNLL ALRGYCTATT PYEGHQRIIV CDLVSNGSLH DHLFGDLEAQ LAWPLRQRIA LGMARGLAYL
401: HYGAQPSIIH RDIKASNILL DERFEAKVAD FGLAKFNPEG MTHMSTRVAG TMGYVAPEYA LYGQLTEKSD VYSFGVVLLE LLSRRKAIVT DEEGQPVSVA
501: DWAWSLVREG QTLDVVEDGM PEKGPPEVLE KYVLIAVLCS HPQLHARPTM DQVVKMLESN EFTVIAIPQR PIPLVACREE IDRSVSSSSG SGKLTSPTGY
601: QAFSFGGDGP SGNTNTT

Arabidopsis Description

RKF3Probable LRR receptor-like serine/threonine-protein kinase RKF3 [Source:UniProtKB/Swiss-Prot;Acc:P93050]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.