Factsheet for Os07t0567700-02

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
cytosol 3
nucleus 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	plastid
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Os01t0267900-01
Os01t0279300-01
Os01t0810300-01
Os03t0319300-01
Os03t0433200-00
Os05t0491000-01
Os05t0491100-01
Os07t0586900-01
Os07t0687200-02
Os12t0603800-00

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G41920.1	Os01t0267900-01	AT2G41100.1	17360592
AT5G41920.1	Os01t0279300-01	AT2G41100.1	17360592
AT5G41920.1	Os01t0810300-01	AT2G41100.1	17360592
AT5G41920.1	Os03t0319300-01	AT2G41100.1	17360592
AT5G41920.1	Os05t0491000-01	AT2G41100.1	17360592
AT5G41920.1	Os05t0491100-01	AT2G41100.1	17360592
AT5G41920.1	Os07t0687200-02	AT2G41100.1	17360592
AT5G41920.1	Os12t0603800-00	AT2G41100.1	17360592
AT5G41920.1	Os03t0433200-00	AT4G37650.1	18500650
AT5G41920.1	Os07t0586900-01	AT4G37650.1	18500650

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2B01G228000.1	Wheat	cytosol	85.56	87.08
TraesCS2D01G208500.1	Wheat	cytosol	84.9	86.41
TraesCS2A01G200700.1	Wheat	cytosol	84.9	86.22
Zm00001d021826_P001	Maize	cytosol	84.25	85.18
KXG36498	Sorghum	cytosol, plastid	84.46	83.91
HORVU0Hr1G003230.2	Barley	mitochondrion	79.43	78.4
GSMUA_Achr4P23590_001	Banana	cytosol, mitochondrion, nucleus, plastid	48.36	71.75
CDY64484	Canola	mitochondrion	36.54	67.89
Bra025456.1-P	Field mustard	mitochondrion	36.32	67.48
VIT_03s0017g01660.t01	Wine grape	plastid	65.21	67.42
PGSC0003DMT400030652	Potato	cytosol	59.08	65.69
KRH29089	Soybean	mitochondrion	63.46	65.61
Solyc07g043330.1.1	Tomato	plastid	60.18	63.66
KRH24117	Soybean	plastid	61.93	63.6
CDY27670	Canola	cytosol	55.14	62.38
AT5G41920.1	Thale cress	cytosol	54.49	61.48
Os11t0124300-01	Rice	nucleus, plastid	52.74	37.02
Os12t0122000-01	Rice	plastid	52.52	36.36
Os01t0948200-00	Rice	cytosol	29.98	31.0
Os06t0610350-01	Rice	cytosol	29.1	30.16
Os02t0197300-00	Rice	cytosol	28.45	29.15
Os01t0646300-01	Rice	cytosol	31.51	29.09
Os05t0485400-00	Rice	peroxisome	31.51	28.8
Os06t0211500-00	Rice	cytosol	11.6	27.75
Os12t0138100-00	Rice	cytosol	27.13	25.2
Os11t0141500-00	Rice	cytosol	26.91	25.0
Os04t0432100-00	Rice	nucleus	27.13	24.6
Os05t0574900-01	Rice	plasma membrane	25.82	23.6
Os03t0707600-01	Rice	nucleus	30.42	22.24
Os11t0141700-00	Rice	cytosol	24.51	22.13
Os06t0127800-01	Rice	plastid	29.32	21.72
Os12t0138200-00	Rice	cytosol	24.07	21.57
Os03t0723000-01	Rice	nucleus	27.13	21.45
Os05t0378200-00	Rice	cytosol	24.29	20.15
Os05t0378500-00	Rice	plastid	22.54	18.39
Os12t0138166-00	Rice	endoplasmic reticulum, extracellular	1.75	2.27
Os11t0141550-01	Rice	cytosol	0.44	1.55

Protein Annotations

MapMan:15.5.12	EntrezGene:4343637	UniProt:A0A0P0X7S9	ProteinID:BAT02196.1	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0007275	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0030154	GO:GO:0043565	GO:GO:0048366
GO:GO:0090610	InterPro:IPR005202	EnsemblPlantsGene:Os07g0567700	EnsemblPlants:Os07t0567700-02	PFAM:PF03514	PFscan:PS50985
PANTHER:PTHR31636	PANTHER:PTHR31636:SF35	InterPro:TF_GRAS	UniParc:UPI0000E12BA2	RefSeq:XP_015644982.1	SEG:seg

Description

Similar to SCARECROW. (Os07t0567700-01);SCARECROW gene regulator-like protein. (Os07t0567700-02);Similar to Scarecrow-like 23 (Fragment). (Os07t0567700-03)

Coordinates

chr7:+:22807717..22809297

Molecular Weight (calculated)

49099.4 Da

IEP (calculated)

5.597

GRAVY (calculated)

-0.127

Length

457 amino acids

Sequence
(BLAST)

001: MLQGVLSRAP GADAAAMKAK RAADDEEEGG ERERARGKRL AAEGKQGLVV VSTGEEEEAA AETRGLRLLS LLLRCAEAVA MDQLPEARDL LPEIAELASP
101: FGSSPERVAA YFGDALCARV LSSYLGAYSP LALRPLAAAQ SRRISGAFQA YNALSPLVKF SHFTANQAIF QALDGEDRVH VIDLDIMQGL QWPGLFHILA
201: SRPTKPRSLR ITGLGASLDV LEATGRRLAD FAASLGLPFE FRPIEGKIGH VADAAALLGP RHHGEATVVH WMHHCLYDVT GSDAGTVRLL KSLRPKLITI
301: VEQDLGHSGD FLGRFVEALH YYSALFDALG DGAGAAEEEA AERHAVERQL LGAEIRNIVA VGGPKRTGEV RVERWGDELR RAGFRPVTLA GSPAAQARLL
401: LGMYPWKGYT LVEEDGCLKL GWKDLSLLTA SSWEPTDGDA DADVAVAGDT HHESHDS

Best Arabidopsis Sequence Match ( AT5G41920.1 )
(BLAST)

001: MTTKRIDRDL PSSDDPSSAK RRIEFPEETL ENDGAAAIKL LSLLLQCAEY VATDHLREAS TLLSEISEIC SPFGSSPERV VAYFAQALQT RVISSYLSGA
101: CSPLSEKPLT VVQSQKIFSA LQTYNSVSPL IKFSHFTANQ AIFQALDGED SVHIIDLDVM QGLQWPALFH ILASRPRKLR SIRITGFGSS SDLLASTGRR
201: LADFASSLNL PFEFHPIEGI IGNLIDPSQL ATRQGEAVVV HWMQHRLYDV TGNNLETLEI LRRLKPNLIT VVEQELSYDD GGSFLGRFVE ALHYYSALFD
301: ALGDGLGEES GERFTVEQIV LGTEIRNIVA HGGGRRKRMK WKEELSRVGF RPVSLRGNPA TQAGLLLGML PWNGYTLVEE NGTLRLGWKD LSLLTASAWK
401: SQPFD

Arabidopsis Description

SCL23Scarecrow-like protein 23 [Source:UniProtKB/Swiss-Prot;Acc:Q9FHZ1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.