Factsheet for HORVU0Hr1G003230.2

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, plastid
iPSORT:	plastid
MultiLoc:	mitochondrion
TargetP:	mitochondrion

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU0Hr1G001280.1
HORVU2Hr1G016740.4
HORVU2Hr1G035730.4
HORVU3Hr1G038010.1
HORVU3Hr1G079210.4
HORVU4Hr1G026290.3
HORVU5Hr1G014060.1
HORVU5Hr1G014070.2
HORVU5Hr1G044710.4

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G41920.1	HORVU0Hr1G001280.1	AT2G41100.1	17360592
AT5G41920.1	HORVU2Hr1G016740.4	AT2G41100.1	17360592
AT5G41920.1	HORVU3Hr1G038010.1	AT2G41100.1	17360592
AT5G41920.1	HORVU3Hr1G079210.4	AT2G41100.1	17360592
AT5G41920.1	HORVU4Hr1G026290.3	AT2G41100.1	17360592
AT5G41920.1	HORVU5Hr1G014060.1	AT2G41100.1	17360592
AT5G41920.1	HORVU5Hr1G014070.2	AT2G41100.1	17360592
AT5G41920.1	HORVU5Hr1G044710.4	AT2G41100.1	17360592
AT5G41920.1	HORVU2Hr1G035730.4	AT4G37650.1	18500650

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2B01G228000.1	Wheat	cytosol	87.47	90.2
TraesCS2D01G208500.1	Wheat	cytosol	87.04	89.75
TraesCS2A01G200700.1	Wheat	cytosol	86.18	88.67
Os07t0567700-02	Rice	cytosol	78.4	79.43
Zm00001d021826_P001	Maize	cytosol	75.81	77.65
KXG36498	Sorghum	cytosol, plastid	75.81	76.3
GSMUA_Achr4P23590_001	Banana	cytosol, mitochondrion, nucleus, plastid	41.68	62.66
VIT_03s0017g01660.t01	Wine grape	plastid	58.75	61.54
KRH29089	Soybean	mitochondrion	57.45	60.18
PGSC0003DMT400030652	Potato	cytosol	53.35	60.1
Bra025456.1-P	Field mustard	mitochondrion	31.53	59.35
CDY64484	Canola	mitochondrion	31.53	59.35
KRH24117	Soybean	plastid	56.16	58.43
Solyc07g043330.1.1	Tomato	plastid	54.21	58.1
CDY27670	Canola	cytosol	48.81	55.94
AT5G41920.1	Thale cress	cytosol	48.38	55.31
HORVU5Hr1G045920.2	Barley	cytosol	48.16	38.12
HORVU3Hr1G106260.1	Barley	cytosol	13.61	35.2
HORVU1Hr1G069140.1	Barley	cytosol	31.97	31.69
HORVU3Hr1G088820.1	Barley	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	17.71	31.54
HORVU2Hr1G113480.1	Barley	cytosol	19.65	28.89
HORVU2Hr1G113490.1	Barley	cytosol	19.65	28.89
HORVU6Hr1G033280.1	Barley	cytosol	26.35	27.35
HORVU7Hr1G091000.1	Barley	cytosol	24.84	27.0
HORVU3Hr1G088780.2	Barley	cytosol	28.29	24.67
HORVU3Hr1G058100.1	Barley	plastid	29.81	24.51
HORVU0Hr1G004640.1	Barley	mitochondrion, nucleus, plastid	24.41	23.59
HORVU2Hr1G113360.1	Barley	cytosol	23.54	22.95
HORVU4Hr1G008930.3	Barley	cytosol, mitochondrion	16.85	22.1
HORVU1Hr1G090800.1	Barley	mitochondrion	25.27	21.83
HORVU5Hr1G043310.1	Barley	cytosol	25.92	21.82
HORVU4Hr1G026010.3	Barley	cytosol	20.73	21.52
HORVU7Hr1G010620.1	Barley	cytosol	25.92	21.31
HORVU4Hr1G006930.1	Barley	nucleus	28.08	21.04
HORVU4Hr1G008980.3	Barley	mitochondrion, nucleus	23.11	19.35

Protein Annotations

MapMan:15.5.12	UniProt:A0A287DV59	ncoils:Coil	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0007275	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0030154	GO:GO:0048366	GO:GO:0090610
EnsemblPlantsGene:HORVU0Hr1G003230	EnsemblPlants:HORVU0Hr1G003230.2	InterPro:IPR005202	PFAM:PF03514	PFscan:PS50985	PANTHER:PTHR31636
PANTHER:PTHR31636:SF35	InterPro:TF_GRAS	UniParc:UPI000B479578	SEG:seg	:	:

Description

No Description!

Coordinates

chrchrUn:+:13470568..13472029

Molecular Weight (calculated)

50368.4 Da

IEP (calculated)

7.375

GRAVY (calculated)

-0.165

Length

463 amino acids

Sequence
(BLAST)

001: GRHQAPANRQ PQAAARLCSH ARPTLAAGEH CALLHRSYEL SLSLSGVLSR APATDAAMKA KRAASMPDDE EKARGKRLQL HGSASEHEQG LLAVAAVEEG
101: ERVVEAAETR GLRLLRLLLR CAEAVAMDQL PEARDMLQEV AELASPFGSS PERVAAYFGD ALCARVLSSY LGAYSPLAAA QSRRISSAFQ AYNALSPLVK
201: FSHFTANKAI LQALDGEDHV HVIDLDIMQG LQWPGLFHML ASRPRRPLSL RVTGLGASLD VLEATGRRLA DFAASLGLPF EFQPIEGKIG HVADTTALLG
301: PRHHHHREAT VVHWMHHCLY DVTGSDVGTV RLLKSLRPKL MTIVEQDLGH SGDFLGRFVE ALHYYSALFD ALRDSAGAAE EERHEVERQL LGAEIRNIVA
401: VGGPKRTGEV RVERWGDELR RAGFRPVSLA GSPAAQARLL IGMYPWKGYT LAEEDGCLKL GWX

Best Arabidopsis Sequence Match ( AT5G41920.1 )
(BLAST)

001: MTTKRIDRDL PSSDDPSSAK RRIEFPEETL ENDGAAAIKL LSLLLQCAEY VATDHLREAS TLLSEISEIC SPFGSSPERV VAYFAQALQT RVISSYLSGA
101: CSPLSEKPLT VVQSQKIFSA LQTYNSVSPL IKFSHFTANQ AIFQALDGED SVHIIDLDVM QGLQWPALFH ILASRPRKLR SIRITGFGSS SDLLASTGRR
201: LADFASSLNL PFEFHPIEGI IGNLIDPSQL ATRQGEAVVV HWMQHRLYDV TGNNLETLEI LRRLKPNLIT VVEQELSYDD GGSFLGRFVE ALHYYSALFD
301: ALGDGLGEES GERFTVEQIV LGTEIRNIVA HGGGRRKRMK WKEELSRVGF RPVSLRGNPA TQAGLLLGML PWNGYTLVEE NGTLRLGWKD LSLLTASAWK
401: SQPFD

Arabidopsis Description

SCL23Scarecrow-like protein 23 [Source:UniProtKB/Swiss-Prot;Acc:Q9FHZ1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.