Factsheet for Os05t0485400-00

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

nucleus 2
peroxisome 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	peroxisome
Any Predictor:	mitochondrion, nucleus, peroxisome
BaCelLo:	nucleus
MultiLoc:	peroxisome
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	peroxisome
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU1Hr1G069140.1	Barley	cytosol	67.4	72.16
EES18409	Sorghum	cytosol	70.6	71.6
TraesCS1B01G314500.1	Wheat	peroxisome	65.6	71.15
TraesCS1D01G303500.1	Wheat	peroxisome	68.6	70.29
TraesCS1A01G304000.1	Wheat	peroxisome	69.0	70.26
Zm00001d038518_P001	Maize	cytosol	69.8	70.22
VIT_07s0005g03700.t01	Wine grape	cytosol	39.0	40.04
PGSC0003DMT400087504	Potato	nucleus	37.6	38.68
Solyc09g066450.1.1	Tomato	cytosol	37.0	37.0
KRH19587	Soybean	cytosol	37.6	35.74
KRH32212	Soybean	cytosol	37.8	35.2
Os07t0567700-02	Rice	cytosol	28.8	31.51
Os06t0610350-01	Rice	cytosol	25.2	28.57
Os01t0948200-00	Rice	cytosol	25.0	28.28
Os01t0646300-01	Rice	cytosol	26.4	26.67
Os02t0197300-00	Rice	cytosol	23.6	26.46
Os12t0138100-00	Rice	cytosol	25.2	25.61
Os11t0141500-00	Rice	cytosol	25.0	25.41
Os11t0124300-01	Rice	nucleus, plastid	32.6	25.04
Os12t0122000-01	Rice	plastid	32.8	24.85
Os05t0574900-01	Rice	plasma membrane	23.6	23.6
Os06t0211500-00	Rice	cytosol	8.6	22.51
Os06t0127800-01	Rice	plastid	26.8	21.72
Os04t0432100-00	Rice	nucleus	21.4	21.23
Os03t0707600-01	Rice	nucleus	26.2	20.96
Os12t0138200-00	Rice	cytosol	21.2	20.78
Os11t0141700-00	Rice	cytosol	20.2	19.96
Os03t0723000-01	Rice	nucleus	22.6	19.55
Os05t0378200-00	Rice	cytosol	21.0	19.06
Os05t0378500-00	Rice	plastid	20.8	18.57
Os12t0138166-00	Rice	endoplasmic reticulum, extracellular	1.8	2.55
Os11t0141550-01	Rice	cytosol	0.2	0.78

Protein Annotations

MapMan:15.5.12	UniProt:A0A0N7KKZ7	ProteinID:BAS94609.1	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0043565	InterPro:IPR005202	EnsemblPlantsGene:Os05g0485400	EnsemblPlants:Os05t0485400-00	PFAM:PF03514
PFscan:PS50985	PANTHER:PTHR31636	PANTHER:PTHR31636:SF22	InterPro:TF_GRAS	UniParc:UPI0003938701	SEG:seg

Description

Transcription factor GRAS domain containing protein. (Os05t0485400-00)

Coordinates

chr5:+:23871495..23873014

Molecular Weight (calculated)

52352.1 Da

IEP (calculated)

6.139

GRAVY (calculated)

-0.009

Length

500 amino acids

Sequence
(BLAST)

001: MTGRGSDMQD SLGLMQFLDH HQYLYSSSSS NLPLQQPLLS HHHRFLEANE GCAGEDDSPE FVEPPAAAAA AGTFEQRPEL GACKEVYSEE GGAAEERTGV
101: AMAGADVEQV AVEDEEEAHG VRMIALLMEC AAAMSVGNLA GANGALLELS QMASPYAASC GERLVAYFAR AMAARLVGSW VGVVAPMAPP PSCGAINAAF
201: RALYNVAPFA RLAYLACNQA ILEAFHGKRL VHIVDLDVVP GGALQWLSLL PALAARPGGP PVIRVTGFGM SASVLHDTGN QLAGLARKLC MFFEFYAVAK
301: RPGDADAVAD MPGRRPGEAV AVHWLRHAMY DAAGDDGASM RLVRWLEPAA VTLVEQERAH GGGGGHGRFL DRFVSALHHY SAVFDAMGAS RPDGEDASRH
401: LAEHGVLGRE IANVLAVGGP ARSSGREGPG SWREVLARHG FAHAGGGGGG RAQLVAAACP GGLGYTVAGD HDGTVRLGWK GTPLYAVSAW TWCSPPHARA

Best Arabidopsis Sequence Match ( AT3G54220.1 )
(BLAST)

001: MAESGDFNGG QPPPHSPLRT TSSGSSSSNN RGPPPPPPPP LVMVRKRLAS EMSSNPDYNN SSRPPRRVSH LLDSNYNTVT PQQPPSLTAA ATVSSQPNPP
101: LSVCGFSGLP VFPSDRGGRN VMMSVQPMDQ DSSSSSASPT VWVDAIIRDL IHSSTSVSIP QLIQNVRDII FPCNPNLGAL LEYRLRSLML LDPSSSSDPS
201: PQTFEPLYQI SNNPSPPQQQ QQHQQQQQQH KPPPPPIQQQ ERENSSTDAP PQPETVTATV PAVQTNTAEA LRERKEEIKR QKQDEEGLHL LTLLLQCAEA
301: VSADNLEEAN KLLLEISQLS TPYGTSAQRV AAYFSEAMSA RLLNSCLGIY AALPSRWMPQ THSLKMVSAF QVFNGISPLV KFSHFTANQA IQEAFEKEDS
401: VHIIDLDIMQ GLQWPGLFHI LASRPGGPPH VRLTGLGTSM EALQATGKRL SDFADKLGLP FEFCPLAEKV GNLDTERLNV RKREAVAVHW LQHSLYDVTG
501: SDAHTLWLLQ RLAPKVVTVV EQDLSHAGSF LGRFVEAIHY YSALFDSLGA SYGEESEERH VVEQQLLSKE IRNVLAVGGP SRSGEVKFES WREKMQQCGF
601: KGISLAGNAA TQATLLLGMF PSDGYTLVDD NGTLKLGWKD LSLLTASAWT PRS

Arabidopsis Description

SCRProtein SCARECROW [Source:UniProtKB/Swiss-Prot;Acc:Q9M384]
SUBAcon: [plastid,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.