Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400087504 | Potato | nucleus | 91.0 | 93.62 |
| VIT_07s0005g03700.t01 | Wine grape | cytosol | 68.2 | 70.02 |
| KRH19587 | Soybean | cytosol | 62.8 | 59.7 |
| KRH32212 | Soybean | cytosol | 62.4 | 58.1 |
| TraesCS1B01G314500.1 | Wheat | peroxisome | 37.4 | 40.56 |
| Solyc07g043330.1.1 | Tomato | plastid | 35.0 | 40.51 |
| HORVU1Hr1G069140.1 | Barley | cytosol | 37.6 | 40.26 |
| EES18409 | Sorghum | cytosol | 38.8 | 39.35 |
| Zm00001d038518_P001 | Maize | cytosol | 38.8 | 39.03 |
| TraesCS1D01G303500.1 | Wheat | peroxisome | 38.0 | 38.93 |
| TraesCS1A01G304000.1 | Wheat | peroxisome | 38.0 | 38.7 |
| Os05t0485400-00 | Rice | peroxisome | 37.0 | 37.0 |
| Solyc07g066250.1.1 | Tomato | nucleus | 24.8 | 28.97 |
| Solyc01g008910.2.1 | Tomato | cytosol | 25.2 | 26.47 |
| Solyc12g099900.1.1 | Tomato | nucleus | 24.4 | 26.07 |
| Solyc11g017100.1.1 | Tomato | cytosol | 24.6 | 25.84 |
| Solyc10g074680.1.1 | Tomato | cytosol | 42.0 | 25.42 |
| Solyc10g086370.1.1 | Tomato | nucleus | 24.0 | 23.53 |
| Solyc10g086380.1.1 | Tomato | nucleus | 23.6 | 23.0 |
| Solyc11g011260.1.1 | Tomato | nucleus | 26.8 | 22.79 |
| Solyc03g110950.1.1 | Tomato | cytosol | 24.0 | 22.64 |
| Solyc08g080400.1.1 | Tomato | plastid | 30.0 | 22.09 |
| Solyc02g085340.1.1 | Tomato | cytosol | 26.6 | 21.84 |
| Solyc02g094340.1.1 | Tomato | nucleus | 27.8 | 20.44 |
Protein Annotations
| MapMan:15.5.12 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043565 |
| InterPro:IPR005202 | UniProt:K4CUS0 | PFAM:PF03514 | PFscan:PS50985 | PANTHER:PTHR31636 | PANTHER:PTHR31636:SF22 |
| EnsemblPlantsGene:Solyc09g066450.1 | EnsemblPlants:Solyc09g066450.1.1 | InterPro:TF_GRAS | UniParc:UPI000276AD63 | : | : |
Description
No Description!
Coordinates
chr9:-:64864778..64866280
Molecular Weight (calculated)
55963.4 Da
IEP (calculated)
6.252
GRAVY (calculated)
-0.307
Length
500 amino acids
Sequence
(BLAST)
(BLAST)
001: MMKGESELIH QHTPLDQPNE QWDYCSPNHP SKTLITENRA NNPDQRNELS QWVEQVTRQL LIEDLPENEF SDTDTATYHV SALLGELRPK KIARRDCNSE
101: GIGGQQQHEW NSSTHDDHHV ARDEMGVKGM SGLDEQGLNL ITLLLEGAVA ISVDNLGEAH RVLLELTQVA SPYGPSCAER VVAYFAKAMA SRVINSWLGI
201: CSPLINYKTV HTALQAFNNI SPFIKFAHFT SNQAILEAFH RRDRVHIIDV DIMQGLQWPA LFHILATRME GPPHVTMTGV GTSMELLIET GKQLSNFAKR
301: LGMSFEFHPV VGKTGEIDIS TFKISRGEAI AIHWVQHSLY DATGPDWKTM RLLQQLSPRV VTLVEQEIAL GGSFLDRFVG SLHYYSTIFD SLGAFLESDD
401: SSRHSVEHGL LYREINNILA IGGPARNGED KFRHWRSELS KNGFIQVPMS TNSMAQAQLI LNMFPPAHGY SLVQGDGTLR LGWKDTSLFT ASAWTSPNSR
101: GIGGQQQHEW NSSTHDDHHV ARDEMGVKGM SGLDEQGLNL ITLLLEGAVA ISVDNLGEAH RVLLELTQVA SPYGPSCAER VVAYFAKAMA SRVINSWLGI
201: CSPLINYKTV HTALQAFNNI SPFIKFAHFT SNQAILEAFH RRDRVHIIDV DIMQGLQWPA LFHILATRME GPPHVTMTGV GTSMELLIET GKQLSNFAKR
301: LGMSFEFHPV VGKTGEIDIS TFKISRGEAI AIHWVQHSLY DATGPDWKTM RLLQQLSPRV VTLVEQEIAL GGSFLDRFVG SLHYYSTIFD SLGAFLESDD
401: SSRHSVEHGL LYREINNILA IGGPARNGED KFRHWRSELS KNGFIQVPMS TNSMAQAQLI LNMFPPAHGY SLVQGDGTLR LGWKDTSLFT ASAWTSPNSR
001: MAESGDFNGG QPPPHSPLRT TSSGSSSSNN RGPPPPPPPP LVMVRKRLAS EMSSNPDYNN SSRPPRRVSH LLDSNYNTVT PQQPPSLTAA ATVSSQPNPP
101: LSVCGFSGLP VFPSDRGGRN VMMSVQPMDQ DSSSSSASPT VWVDAIIRDL IHSSTSVSIP QLIQNVRDII FPCNPNLGAL LEYRLRSLML LDPSSSSDPS
201: PQTFEPLYQI SNNPSPPQQQ QQHQQQQQQH KPPPPPIQQQ ERENSSTDAP PQPETVTATV PAVQTNTAEA LRERKEEIKR QKQDEEGLHL LTLLLQCAEA
301: VSADNLEEAN KLLLEISQLS TPYGTSAQRV AAYFSEAMSA RLLNSCLGIY AALPSRWMPQ THSLKMVSAF QVFNGISPLV KFSHFTANQA IQEAFEKEDS
401: VHIIDLDIMQ GLQWPGLFHI LASRPGGPPH VRLTGLGTSM EALQATGKRL SDFADKLGLP FEFCPLAEKV GNLDTERLNV RKREAVAVHW LQHSLYDVTG
501: SDAHTLWLLQ RLAPKVVTVV EQDLSHAGSF LGRFVEAIHY YSALFDSLGA SYGEESEERH VVEQQLLSKE IRNVLAVGGP SRSGEVKFES WREKMQQCGF
601: KGISLAGNAA TQATLLLGMF PSDGYTLVDD NGTLKLGWKD LSLLTASAWT PRS
101: LSVCGFSGLP VFPSDRGGRN VMMSVQPMDQ DSSSSSASPT VWVDAIIRDL IHSSTSVSIP QLIQNVRDII FPCNPNLGAL LEYRLRSLML LDPSSSSDPS
201: PQTFEPLYQI SNNPSPPQQQ QQHQQQQQQH KPPPPPIQQQ ERENSSTDAP PQPETVTATV PAVQTNTAEA LRERKEEIKR QKQDEEGLHL LTLLLQCAEA
301: VSADNLEEAN KLLLEISQLS TPYGTSAQRV AAYFSEAMSA RLLNSCLGIY AALPSRWMPQ THSLKMVSAF QVFNGISPLV KFSHFTANQA IQEAFEKEDS
401: VHIIDLDIMQ GLQWPGLFHI LASRPGGPPH VRLTGLGTSM EALQATGKRL SDFADKLGLP FEFCPLAEKV GNLDTERLNV RKREAVAVHW LQHSLYDVTG
501: SDAHTLWLLQ RLAPKVVTVV EQDLSHAGSF LGRFVEAIHY YSALFDSLGA SYGEESEERH VVEQQLLSKE IRNVLAVGGP SRSGEVKFES WREKMQQCGF
601: KGISLAGNAA TQATLLLGMF PSDGYTLVDD NGTLKLGWKD LSLLTASAWT PRS
Arabidopsis Description
SCRProtein SCARECROW [Source:UniProtKB/Swiss-Prot;Acc:Q9M384]
SUBAcon: [plastid,nucleus]
SUBAcon: [plastid,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.