Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400052191 | Potato | cytosol | 54.71 | 99.2 |
| VIT_14s0068g01610.t01 | Wine grape | plastid | 67.21 | 68.41 |
| KRG94590 | Soybean | plastid | 65.29 | 65.2 |
| KRH06900 | Soybean | plastid | 64.71 | 64.14 |
| OQU83473 | Sorghum | cytosol | 39.26 | 63.27 |
| GSMUA_Achr6P20830_001 | Banana | nucleus | 47.06 | 52.46 |
| TraesCS2D01G095300.1 | Wheat | nucleus | 48.97 | 46.57 |
| TraesCS2B01G112100.1 | Wheat | nucleus | 48.97 | 46.57 |
| TraesCS2A01G096800.1 | Wheat | nucleus | 48.82 | 46.43 |
| Zm00001d049249_P001 | Maize | plastid | 48.24 | 42.32 |
| Solyc07g043330.1.1 | Tomato | plastid | 22.94 | 36.11 |
| Solyc07g066250.1.1 | Tomato | nucleus | 22.21 | 35.28 |
| Solyc12g099900.1.1 | Tomato | nucleus | 23.68 | 34.4 |
| Solyc01g008910.2.1 | Tomato | cytosol | 23.38 | 33.4 |
| Solyc03g110950.1.1 | Tomato | cytosol | 25.88 | 33.21 |
| Solyc11g017100.1.1 | Tomato | cytosol | 21.03 | 30.04 |
| Solyc11g011260.1.1 | Tomato | nucleus | 25.29 | 29.25 |
| Solyc10g086380.1.1 | Tomato | nucleus | 21.91 | 29.04 |
| Solyc09g066450.1.1 | Tomato | cytosol | 20.44 | 27.8 |
| Solyc10g086370.1.1 | Tomato | nucleus | 20.15 | 26.86 |
| Solyc02g085340.1.1 | Tomato | cytosol | 22.5 | 25.12 |
| Solyc08g080400.1.1 | Tomato | plastid | 24.41 | 24.45 |
| Solyc10g074680.1.1 | Tomato | cytosol | 25.15 | 20.7 |
Protein Annotations
| MapMan:11.6.2.2 | MapMan:15.5.12 | MapMan:26.9.2.1 | MapMan:26.9.2.3 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043565 | InterPro:IPR005202 | UniProt:K4BDM9 | PFAM:PF03514 |
| PFscan:PS50985 | PANTHER:PTHR31636 | PANTHER:PTHR31636:SF3 | EnsemblPlantsGene:Solyc02g094340.1 | EnsemblPlants:Solyc02g094340.1.1 | InterPro:TF_GRAS |
| UniParc:UPI0002768AAE | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chr2:+:54894729..54897225
Molecular Weight (calculated)
75480.3 Da
IEP (calculated)
5.263
GRAVY (calculated)
-0.282
Length
680 amino acids
Sequence
(BLAST)
(BLAST)
001: MGSLKNDIIK NEVGSEITSF KDQNSYIKLL PEDSLASSES KKVTPISSDF ELDCGSLIPT SLTFPPGGGD DDDVEIQSPD NSIWESFFAD QLEADFMISS
101: PVRNLSSTST FCTTTTTHNN NTYTHHNQGI HGQSMMMCSP PRSPLRPNNY NSTNKGKGLS PFQKVFNSPN NQFMQIESFN LPALESFLDD DLASEYSTLK
201: VSDVGSSSES LSVIPDFLEC LALPNSSSNT SASFMGSLLS NTSVGQVDDE IFQTGSIAPL SQQLHQERHH EKQQKQIPTH VQLPSTQQQY TQMINHNLVV
301: AAPDQMQEQD SGLQLVHLLL ACAEAVSKED YMLARRYLHH LNRVVTPIGD SMQRVASCFT EALTARLAAT LATKPSTSVP KPFNPFPPNS LEILKIYQIL
401: YQACPYVKFA HFTANQAIFE AFEAEERVHV IDLDILQGYQ WPAFMQALAA RPGGAPFLRI TGVGSYPEAV RETGRCLTEL AQSLHVPFEF HPVGEQLEDL
501: KPHMFNRRIG EALAVNSVNR LHRVPGNCIG NLLGMIRDQA PNIVTIVEQE ASHNGPYFLG RFLEALHYYS AIFDSLDATF PGDSSQRAKL EQYIFGPEIM
601: NIVSCEGMER MVRHERLEKW RRVMEGKGFK GVALSANAVT QSKILLGLYS CDGYKLTEDN GCLLLGWQDR AILAASAWRC
101: PVRNLSSTST FCTTTTTHNN NTYTHHNQGI HGQSMMMCSP PRSPLRPNNY NSTNKGKGLS PFQKVFNSPN NQFMQIESFN LPALESFLDD DLASEYSTLK
201: VSDVGSSSES LSVIPDFLEC LALPNSSSNT SASFMGSLLS NTSVGQVDDE IFQTGSIAPL SQQLHQERHH EKQQKQIPTH VQLPSTQQQY TQMINHNLVV
301: AAPDQMQEQD SGLQLVHLLL ACAEAVSKED YMLARRYLHH LNRVVTPIGD SMQRVASCFT EALTARLAAT LATKPSTSVP KPFNPFPPNS LEILKIYQIL
401: YQACPYVKFA HFTANQAIFE AFEAEERVHV IDLDILQGYQ WPAFMQALAA RPGGAPFLRI TGVGSYPEAV RETGRCLTEL AQSLHVPFEF HPVGEQLEDL
501: KPHMFNRRIG EALAVNSVNR LHRVPGNCIG NLLGMIRDQA PNIVTIVEQE ASHNGPYFLG RFLEALHYYS AIFDSLDATF PGDSSQRAKL EQYIFGPEIM
601: NIVSCEGMER MVRHERLEKW RRVMEGKGFK GVALSANAVT QSKILLGLYS CDGYKLTEDN GCLLLGWQDR AILAASAWRC
001: MKREHNHRES SAGEGGSSSM TTVIKEEAAG VDELLVVLGY KVRSSDMADV AHKLEQLEMV LGDGISNLSD ETVHYNPSDL SGWVESMLSD LDPTRIQEKP
101: DSEYDLRAIP GSAVYPRDEH VTRRSKRTRI ESELSSTRSV VVLDSQETGV RLVHALLACA EAVQQNNLKL ADALVKHVGL LASSQAGAMR KVATYFAEGL
201: ARRIYRIYPR DDVALSSFSD TLQIHFYESC PYLKFAHFTA NQAILEVFAT AEKVHVIDLG LNHGLQWPAL IQALALRPNG PPDFRLTGIG YSLTDIQEVG
301: WKLGQLASTI GVNFEFKSIA LNNLSDLKPE MLDIRPGLES VAVNSVFELH RLLAHPGSID KFLSTIKSIR PDIMTVVEQE ANHNGTVFLD RFTESLHYYS
401: SLFDSLEGPP SQDRVMSELF LGRQILNLVA CEGEDRVERH ETLNQWRNRF GLGGFKPVSI GSNAYKQASM LLALYAGADG YNVEENEGCL LLGWQTRPLI
501: ATSAWRINRV E
101: DSEYDLRAIP GSAVYPRDEH VTRRSKRTRI ESELSSTRSV VVLDSQETGV RLVHALLACA EAVQQNNLKL ADALVKHVGL LASSQAGAMR KVATYFAEGL
201: ARRIYRIYPR DDVALSSFSD TLQIHFYESC PYLKFAHFTA NQAILEVFAT AEKVHVIDLG LNHGLQWPAL IQALALRPNG PPDFRLTGIG YSLTDIQEVG
301: WKLGQLASTI GVNFEFKSIA LNNLSDLKPE MLDIRPGLES VAVNSVFELH RLLAHPGSID KFLSTIKSIR PDIMTVVEQE ANHNGTVFLD RFTESLHYYS
401: SLFDSLEGPP SQDRVMSELF LGRQILNLVA CEGEDRVERH ETLNQWRNRF GLGGFKPVSI GSNAYKQASM LLALYAGADG YNVEENEGCL LLGWQTRPLI
501: ATSAWRINRV E
Arabidopsis Description
RGL1DELLA protein RGL1 [Source:UniProtKB/Swiss-Prot;Acc:Q9C8Y3]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.