Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400049448 | Potato | nucleus | 75.83 | 76.27 |
| Solyc10g086370.1.1 | Tomato | nucleus | 66.47 | 66.86 |
| Solyc11g011260.1.1 | Tomato | nucleus | 49.9 | 43.54 |
| Solyc07g066250.1.1 | Tomato | nucleus | 24.17 | 28.97 |
| Solyc01g008910.2.1 | Tomato | cytosol | 25.15 | 27.1 |
| Solyc12g099900.1.1 | Tomato | nucleus | 23.78 | 26.07 |
| Solyc07g043330.1.1 | Tomato | plastid | 21.83 | 25.93 |
| Solyc11g017100.1.1 | Tomato | cytosol | 22.61 | 24.37 |
| Solyc09g066450.1.1 | Tomato | cytosol | 23.0 | 23.6 |
| Solyc03g110950.1.1 | Tomato | cytosol | 24.37 | 23.58 |
| Solyc02g094340.1.1 | Tomato | nucleus | 29.04 | 21.91 |
| Solyc08g080400.1.1 | Tomato | plastid | 27.1 | 20.47 |
| Solyc02g085340.1.1 | Tomato | cytosol | 23.98 | 20.2 |
| Solyc10g074680.1.1 | Tomato | cytosol | 26.12 | 16.22 |
Protein Annotations
| MapMan:11.6.2.2 | MapMan:15.5.12 | MapMan:26.6.2.1 | GO:GO:0000003 | GO:GO:0000989 | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0003712 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 |
| GO:GO:0006950 | GO:GO:0007154 | GO:GO:0007165 | GO:GO:0007275 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009628 | GO:GO:0009719 | GO:GO:0009723 | GO:GO:0009737 | GO:GO:0009791 |
| GO:GO:0009863 | GO:GO:0009867 | GO:GO:0009938 | GO:GO:0009987 | GO:GO:0010187 | GO:GO:0042538 |
| GO:GO:0043565 | GO:GO:2000033 | GO:GO:2000377 | InterPro:IPR005202 | UniProt:K4D470 | PFAM:PF03514 |
| PFscan:PS50985 | PANTHER:PTHR31636 | PANTHER:PTHR31636:SF47 | EnsemblPlantsGene:Solyc10g086380.1 | EnsemblPlants:Solyc10g086380.1.1 | InterPro:TF_DELLA |
| InterPro:TF_GRAS | UniParc:UPI00027694C8 | : | : | : | : |
Description
No Description!
Coordinates
chr10:+:65222229..65223770
Molecular Weight (calculated)
57775.0 Da
IEP (calculated)
5.242
GRAVY (calculated)
-0.323
Length
513 amino acids
Sequence
(BLAST)
(BLAST)
001: MSSLEISMDT IMEDEDSFVS NTEAIIYAAS DISGWTHSLI SDHNIPNSSS STSLDEHHHH HQQISTAAGG GGNEDDSMIV SSCASSRWFN NNKQIDDQQE
101: IRIFNVDLRA LCENRLKSCG GSESRDCLVY EESSVRLVNT LMACAEAIQD NNLSLADELI SDIRRISVSQ MGGAMKKEAT YFADALYHKI HRTNSEDIDE
201: SSYPKDQVLS MSFYDSCLFL KFAHFIANQS ILEAFADSKR VHVIDFSLNQ GSQWPALLQA LTLRPGGPPA LRLTGIRGHS QPEDTTDALQ EVGRELAQLA
301: ESTGVEFEFR GFVVHTLADL EAPMLNIRPS NVESVAVNSV FKLHRLFSIP GAIEKVLDLI KQIDPKIVTI AEREVNHNET VFMNRIKEAW YYYSTMFDLL
401: ENSEWTKRST IDLEIAAEHL GREIYNLVAC EGTKRVVRHE TFGQWRVRFN SAGFNLVPLG SNTYRHANML LALYTNGKRY RVEEKDGCLM LSWHSRPLIT
501: TSAWRGYVAN SRD
101: IRIFNVDLRA LCENRLKSCG GSESRDCLVY EESSVRLVNT LMACAEAIQD NNLSLADELI SDIRRISVSQ MGGAMKKEAT YFADALYHKI HRTNSEDIDE
201: SSYPKDQVLS MSFYDSCLFL KFAHFIANQS ILEAFADSKR VHVIDFSLNQ GSQWPALLQA LTLRPGGPPA LRLTGIRGHS QPEDTTDALQ EVGRELAQLA
301: ESTGVEFEFR GFVVHTLADL EAPMLNIRPS NVESVAVNSV FKLHRLFSIP GAIEKVLDLI KQIDPKIVTI AEREVNHNET VFMNRIKEAW YYYSTMFDLL
401: ENSEWTKRST IDLEIAAEHL GREIYNLVAC EGTKRVVRHE TFGQWRVRFN SAGFNLVPLG SNTYRHANML LALYTNGKRY RVEEKDGCLM LSWHSRPLIT
501: TSAWRGYVAN SRD
001: MKRDHHHHHH QDKKTMMMNE EDDGNGMDEL LAVLGYKVRS SEMADVAQKL EQLEVMMSNV QEDDLSQLAT ETVHYNPAEL YTWLDSMLTD LNPPSSNAEY
101: DLKAIPGDAI LNQFAIDSAS SSNQGGGGDT YTTNKRLKCS NGVVETTTAT AESTRHVVLV DSQENGVRLV HALLACAEAV QKENLTVAEA LVKQIGFLAV
201: SQIGAMRKVA TYFAEALARR IYRLSPSQSP IDHSLSDTLQ MHFYETCPYL KFAHFTANQA ILEAFQGKKR VHVIDFSMSQ GLQWPALMQA LALRPGGPPV
301: FRLTGIGPPA PDNFDYLHEV GCKLAHLAEA IHVEFEYRGF VANTLADLDA SMLELRPSEI ESVAVNSVFE LHKLLGRPGA IDKVLGVVNQ IKPEIFTVVE
401: QESNHNSPIF LDRFTESLHY YSTLFDSLEG VPSGQDKVMS EVYLGKQICN VVACDGPDRV ERHETLSQWR NRFGSAGFAA AHIGSNAFKQ ASMLLALFNG
501: GEGYRVEESD GCLMLGWHTR PLIATSAWKL STN
101: DLKAIPGDAI LNQFAIDSAS SSNQGGGGDT YTTNKRLKCS NGVVETTTAT AESTRHVVLV DSQENGVRLV HALLACAEAV QKENLTVAEA LVKQIGFLAV
201: SQIGAMRKVA TYFAEALARR IYRLSPSQSP IDHSLSDTLQ MHFYETCPYL KFAHFTANQA ILEAFQGKKR VHVIDFSMSQ GLQWPALMQA LALRPGGPPV
301: FRLTGIGPPA PDNFDYLHEV GCKLAHLAEA IHVEFEYRGF VANTLADLDA SMLELRPSEI ESVAVNSVFE LHKLLGRPGA IDKVLGVVNQ IKPEIFTVVE
401: QESNHNSPIF LDRFTESLHY YSTLFDSLEG VPSGQDKVMS EVYLGKQICN VVACDGPDRV ERHETLSQWR NRFGSAGFAA AHIGSNAFKQ ASMLLALFNG
501: GEGYRVEESD GCLMLGWHTR PLIATSAWKL STN
Arabidopsis Description
GAIDELLA protein GAI [Source:UniProtKB/Swiss-Prot;Acc:Q9LQT8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.